-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_495

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 5935, 6066
Sorry, prediction Augustus_model.g39997.t1 fails validation.
(ATG)	 GG	1702-1768	GT	AGG
(AGA)	 AG	3388-3455	GT	AGG
(AAC)	 AG	4398-4461	GT	GGG
(GTG)	 AG	4961-5035	GT	CAG
(ACA)	 AG	5935-6066	GT	CTG
-recovered Augustus_model.g39997.t1, initial, 1702, 1768
-recovered Augustus_model.g39997.t1, internal, 3388, 3455
-recovered Augustus_model.g39997.t1, internal, 4398, 4461
-recovered Augustus_model.g39997.t1, internal, 4961, 5035
-recovered Augustus_model.g39997.t1, internal, 5935, 6066
Valid prediction for GlimmerHMM_glimmerT_60421-T1
Valid prediction for snap_scaffold_495-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6479
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support