-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_494

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 5266, 5586
Sorry, prediction snap_scaffold_494-snap.2-T1 fails validation.
(ATG)	 GC	2362-2464	GT	GGG
(GCG)	 AG	3380-3879	GT	CGG
(AGC)	 AG	4162-4234	GT	CGG
(CTT)	 AG	5266-5586	GT	TCG
-recovered snap_scaffold_494-snap.2-T1, initial, 2362, 2464
-recovered snap_scaffold_494-snap.2-T1, internal, 3380, 3879
-recovered snap_scaffold_494-snap.2-T1, internal, 4162, 4234
-recovered snap_scaffold_494-snap.2-T1, internal, 5266, 5586

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_494-snap.1-T1
Valid prediction for Augustus_model.g39996.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4636, rend_intergenic: 2362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 6480
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 4636, rend_intergenic: 2362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support