-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_487

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g39991.t1
Couldn't classify 5244, 5417
Sorry, prediction GlimmerHMM_glimmerT_60411-T1 fails validation.
(ATG)	 AA	4313-4378	GT	AGG
(GAA)	 AG	4594-4818	GT	AGG
(GCT)	 AG	4946-5090	GT	CGG
(GTG)	 AG	5244-5417	GT	TAG
-recovered GlimmerHMM_glimmerT_60411-T1, initial, 4313, 4378
-recovered GlimmerHMM_glimmerT_60411-T1, internal, 4594, 4818
-recovered GlimmerHMM_glimmerT_60411-T1, internal, 4946, 5090
-recovered GlimmerHMM_glimmerT_60411-T1, internal, 5244, 5417

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6571
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support