-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_455

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for HiQ_model.g39963.t1
Couldn't classify 5767, 6061
Sorry, prediction GlimmerHMM_glimmerT_60365-T1 fails validation.
(GTG)	 AG	5767-6061	GT	AGG
(CTC)	 AG	6298-6427	TG	AGT
-recovered GlimmerHMM_glimmerT_60365-T1, terminal, 6298, 6427
-recovered GlimmerHMM_glimmerT_60365-T1, internal, 5767, 6061
Couldn't classify 5766, 6061
Sorry, prediction pasa_asmbl_43722.p1 fails validation.
(GGT)	 CA	5766-6061	GT	AGG
(CTC)	 AG	6298-6427	TG	AGT
-recovered pasa_asmbl_43722.p1, terminal, 6298, 6427
Couldn't classify 5767, 6061
Couldn't classify 6298, 6426
Sorry, prediction snap_scaffold_455-snap.1-T1 fails validation.
(GTG)	 AG	5767-6061	GT	AGG
(CTC)	 AG	6298-6426	GT	TAG
-recovered snap_scaffold_455-snap.1-T1, internal, 5767, 6061
-recovered snap_scaffold_455-snap.1-T1, internal, 6298, 6426

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6873
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support