-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_450

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 5698, 5789
Sorry, prediction GlimmerHMM_glimmerT_60360-T1 fails validation.
(ATG)	 AT	3300-3452	GT	GTG
(AGG)	 AG	3866-4000	GT	CGG
(AGC)	 AG	5698-5789	GT	AGG
-recovered GlimmerHMM_glimmerT_60360-T1, initial, 3300, 3452
-recovered GlimmerHMM_glimmerT_60360-T1, internal, 3866, 4000
-recovered GlimmerHMM_glimmerT_60360-T1, internal, 5698, 5789
Valid prediction for snap_scaffold_450-snap.2-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g39960.t1
Valid prediction for GlimmerHMM_glimmerT_60359-T1
Valid prediction for snap_scaffold_450-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6918
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support