-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_427

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_60329-T1
Valid prediction for Augustus_model.g39939.t1
add_exon() Sorry, Augustus_model.g39939.t1 1723-1852-terminal-1 is invalid.
Valid prediction for GlimmerHMM_glimmerT_60330-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 4621, 4762
Couldn't classify 5220, 5321
Sorry, prediction snap_scaffold_427-snap.1-T1 fails validation.
(CTG)	 AG	4621-4762	GT	AGG
(CAT)	 AG	5220-5321	GT	ATG
-recovered snap_scaffold_427-snap.1-T1, internal, 4621, 4762
-recovered snap_scaffold_427-snap.1-T1, internal, 5220, 5321

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 7057
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support