-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_4/scaffold_4_17119972-17349511 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_4-snap.3525-T1 Valid prediction for snap_scaffold_4-snap.3513-T1 Valid prediction for snap_scaffold_4-snap.3504-T1 Valid prediction for Augustus_model.g7198.t1 Valid prediction for HiQ_model.g7193.t1 Valid prediction for snap_scaffold_4-snap.3539-T1 Valid prediction for GlimmerHMM_glimmerT_10967-T1 Valid prediction for GlimmerHMM_glimmerT_10984-T1 Valid prediction for GlimmerHMM_glimmerT_10971-T1 Valid prediction for GlimmerHMM_glimmerT_10978-T1 Valid prediction for snap_scaffold_4-snap.3500-T1 Valid prediction for snap_scaffold_4-snap.3544-T1 Couldn't classify 67856, 68141 Sorry, prediction pasa_asmbl_42260.p1 fails validation. (GGG) AG 67856-68141 GT AGG (GAG) AG 68214-68296 AA AGA -recovered pasa_asmbl_42260.p1, terminal, 68214, 68296 -recovered pasa_asmbl_42260.p1, internal, 67856, 68141 Valid prediction for CodingQuarry_transcript_49319-T1 Valid prediction for snap_scaffold_4-snap.3538-T1 Valid prediction for snap_scaffold_4-snap.3542-T1 Couldn't classify 41815, 41933 Sorry, prediction pasa_asmbl_42044.p1 fails validation. (CTG) GT 41815-41933 GT ACG (GTA) AG 42098-42165 GT AGG (GTG) AG 42265-42413 GT AGG (CAA) AG 42523-42694 GT GGG (GTC) AG 42865-42978 GT CAG (CCT) AG 43237-43335 GT AGG (GAT) AG 43479-43568 GT CGG (GAG) AG 43746-43855 TT GAT -recovered pasa_asmbl_42044.p1, terminal, 43746, 43855 -recovered pasa_asmbl_42044.p1, internal, 42098, 42165 -recovered pasa_asmbl_42044.p1, internal, 42265, 42413 -recovered pasa_asmbl_42044.p1, internal, 42523, 42694 -recovered pasa_asmbl_42044.p1, internal, 42865, 42978 -recovered pasa_asmbl_42044.p1, internal, 43237, 43335 -recovered pasa_asmbl_42044.p1, internal, 43479, 43568 Valid prediction for snap_scaffold_4-snap.3524-T1 Couldn't classify 56984, 57071 Couldn't classify 57549, 57802 Sorry, prediction CodingQuarry_transcript_49321-T1 fails validation. (ATG) AA 52994-53042 GT AGG (CGG) AG 53472-53613 GT AGG (CTC) AG 54216-54254 GT AGG (CCG) AG 54738-54844 GT GGG (CTG) AG 55212-55363 GT AGG (GAG) AG 55721-55837 GT AGG (TTC) AG 56178-56316 GT TGG (GCG) AG 56486-56565 GT AGG (GTG) AG 56738-56860 GT AGG (GCC) AG 56984-57071 TA GGT (AGA) CC 57549-57802 GT AGG (ATC) AG 58069-58203 AG AGA -recovered CodingQuarry_transcript_49321-T1, initial, 52994, 53042 -recovered CodingQuarry_transcript_49321-T1, terminal, 58069, 58203 -recovered CodingQuarry_transcript_49321-T1, internal, 53472, 53613 -recovered CodingQuarry_transcript_49321-T1, internal, 54216, 54254 -recovered CodingQuarry_transcript_49321-T1, internal, 54738, 54844 -recovered CodingQuarry_transcript_49321-T1, internal, 55212, 55363 -recovered CodingQuarry_transcript_49321-T1, internal, 55721, 55837 -recovered CodingQuarry_transcript_49321-T1, internal, 56178, 56316 -recovered CodingQuarry_transcript_49321-T1, internal, 56486, 56565 -recovered CodingQuarry_transcript_49321-T1, internal, 56738, 56860 Valid prediction for GlimmerHMM_glimmerT_10985-T1 Valid prediction for snap_scaffold_4-snap.3533-T1 Valid prediction for snap_scaffold_4-snap.3516-T1 Valid prediction for Augustus_model.g7195.t1 Valid prediction for GlimmerHMM_glimmerT_10962-T1 Valid prediction for GlimmerHMM_glimmerT_10980-T1 Valid prediction for GlimmerHMM_glimmerT_10973-T1 Valid prediction for snap_scaffold_4-snap.3549-T1 Valid prediction for Augustus_model.g7196.t1 Valid prediction for CodingQuarry_transcript_49325-T1 Valid prediction for Augustus_model.g7192.t1 Valid prediction for GlimmerHMM_glimmerT_10961-T1 Valid prediction for snap_scaffold_4-snap.3540-T1 Valid prediction for snap_scaffold_4-snap.3520-T1 Sorry, intron length (4) is less than minimum required (10) Couldn't classify 56984, 57071 Couldn't classify 57549, 57802 Sorry, prediction CodingQuarry_transcript_49323-T1 fails validation. (ATG) AA 52994-53042 GT AGG (ACA) AG 53433-53613 GT AGG (CCG) AG 54738-54844 GT GGG (CTG) AG 55212-55363 GT AGG (GAG) AG 55721-55837 GT AGG (TTC) AG 56178-56316 GT TGG (GCG) AG 56486-56565 GT AGG (GTG) AG 56738-56860 GT AGG (GCC) AG 56984-57071 TA GGT (AGA) CC 57549-57802 GT AGG (ATC) AG 58069-58203 AG AGA -recovered CodingQuarry_transcript_49323-T1, initial, 52994, 53042 -recovered CodingQuarry_transcript_49323-T1, terminal, 58069, 58203 -recovered CodingQuarry_transcript_49323-T1, internal, 53433, 53613 -recovered CodingQuarry_transcript_49323-T1, internal, 54738, 54844 -recovered CodingQuarry_transcript_49323-T1, internal, 55212, 55363 -recovered CodingQuarry_transcript_49323-T1, internal, 55721, 55837 -recovered CodingQuarry_transcript_49323-T1, internal, 56178, 56316 -recovered CodingQuarry_transcript_49323-T1, internal, 56486, 56565 -recovered CodingQuarry_transcript_49323-T1, internal, 56738, 56860 Valid prediction for GlimmerHMM_glimmerT_10974-T1 Valid prediction for snap_scaffold_4-snap.3510-T1 Valid prediction for snap_scaffold_4-snap.3509-T1 Valid prediction for GlimmerHMM_glimmerT_10968-T1 Valid prediction for snap_scaffold_4-snap.3526-T1 Couldn't classify 41200, 41337 Sorry, prediction pasa_asmbl_42041.p1 fails validation. (ATG) GG 35228-35326 GT AGG (ACG) AG 35516-35710 GT AGG (AGA) AG 36016-36136 GT GTG (TGG) AG 36508-36578 GT AGG (CTG) AG 36857-36948 GT CTG (GAA) AG 37034-37088 GT AGG (AGT) AG 37432-37601 GT AGG (TAC) AG 37721-37995 GT AGG (GTA) AG 38140-38197 GT CAG (TGA) AG 38581-38733 GT AGG (GCT) AG 38821-38860 GT ACG (GAA) AG 39005-39132 GT AGG (GGC) AG 39333-39383 GT AGG (GTT) AG 39679-39819 GT GAG (AGG) AG 40221-40359 GT AGG (GAG) AG 40759-40845 GT AGG (CTG) AG 41030-41077 GT CGG (TGT) AG 41200-41337 AC CCA -recovered pasa_asmbl_42041.p1, initial, 35228, 35326 -recovered pasa_asmbl_42041.p1, internal, 35516, 35710 -recovered pasa_asmbl_42041.p1, internal, 36016, 36136 -recovered pasa_asmbl_42041.p1, internal, 36508, 36578 -recovered pasa_asmbl_42041.p1, internal, 36857, 36948 -recovered pasa_asmbl_42041.p1, internal, 37034, 37088 -recovered pasa_asmbl_42041.p1, internal, 37432, 37601 -recovered pasa_asmbl_42041.p1, internal, 37721, 37995 -recovered pasa_asmbl_42041.p1, internal, 38140, 38197 -recovered pasa_asmbl_42041.p1, internal, 38581, 38733 -recovered pasa_asmbl_42041.p1, internal, 38821, 38860 -recovered pasa_asmbl_42041.p1, internal, 39005, 39132 -recovered pasa_asmbl_42041.p1, internal, 39333, 39383 -recovered pasa_asmbl_42041.p1, internal, 39679, 39819 -recovered pasa_asmbl_42041.p1, internal, 40221, 40359 -recovered pasa_asmbl_42041.p1, internal, 40759, 40845 -recovered pasa_asmbl_42041.p1, internal, 41030, 41077 Valid prediction for GlimmerHMM_glimmerT_10964-T1 Valid prediction for snap_scaffold_4-snap.3547-T1 Valid prediction for CodingQuarry_transcript_49324-T1 Valid prediction for snap_scaffold_4-snap.3531-T1 Valid prediction for snap_scaffold_4-snap.3515-T1 Valid prediction for snap_scaffold_4-snap.3545-T1 Valid prediction for snap_scaffold_4-snap.3534-T1 Valid prediction for Augustus_model.g7197.t1 Valid prediction for snap_scaffold_4-snap.3537-T1 Valid prediction for snap_scaffold_4-snap.3530-T1 Couldn't classify 75183, 75258 Sorry, prediction pasa_asmbl_42047.p1 fails validation. (GAA) CA 75183-75258 GT GAG (GCT) AG 76495-76632 GT AGG (GTG) AG 77272-77492 AG AGA -recovered pasa_asmbl_42047.p1, terminal, 77272, 77492 -recovered pasa_asmbl_42047.p1, internal, 76495, 76632 Valid prediction for GlimmerHMM_glimmerT_10981-T1 Valid prediction for GlimmerHMM_glimmerT_10965-T1 Valid prediction for snap_scaffold_4-snap.3512-T1 Valid prediction for CodingQuarry_transcript_49320-T1 Valid prediction for GlimmerHMM_glimmerT_10969-T1 Couldn't classify 56984, 57071 Couldn't classify 57549, 57802 Sorry, prediction CodingQuarry_transcript_49322-T1 fails validation. (ATG) AA 52994-53042 GT AGG (CGG) AG 53472-53613 GT AGG (CCG) AG 54738-54844 GT GGG (CTG) AG 55212-55363 GT AGG (GAG) AG 55721-55837 GT AGG (TTC) AG 56178-56316 GT TGG (GCG) AG 56486-56565 GT AGG (GTG) AG 56738-56860 GT AGG (GCC) AG 56984-57071 TA GGT (AGA) CC 57549-57802 GT AGG (ATC) AG 58069-58203 AG AGA -recovered CodingQuarry_transcript_49322-T1, initial, 52994, 53042 -recovered CodingQuarry_transcript_49322-T1, terminal, 58069, 58203 -recovered CodingQuarry_transcript_49322-T1, internal, 53472, 53613 -recovered CodingQuarry_transcript_49322-T1, internal, 54738, 54844 -recovered CodingQuarry_transcript_49322-T1, internal, 55212, 55363 -recovered CodingQuarry_transcript_49322-T1, internal, 55721, 55837 -recovered CodingQuarry_transcript_49322-T1, internal, 56178, 56316 -recovered CodingQuarry_transcript_49322-T1, internal, 56486, 56565 -recovered CodingQuarry_transcript_49322-T1, internal, 56738, 56860 Valid prediction for Augustus_model.g7190.t1 Valid prediction for snap_scaffold_4-snap.3536-T1 Valid prediction for Augustus_model.g7208.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_10972-T1 Valid prediction for snap_scaffold_4-snap.3501-T1 Valid prediction for GlimmerHMM_glimmerT_10970-T1 Valid prediction for GlimmerHMM_glimmerT_10960-T1 Valid prediction for CodingQuarry_transcript_49313-T1 Valid prediction for snap_scaffold_4-snap.3527-T1 Valid prediction for snap_scaffold_4-snap.3521-T1 Valid prediction for GlimmerHMM_glimmerT_10977-T1 Valid prediction for snap_scaffold_4-snap.3543-T1 Valid prediction for snap_scaffold_4-snap.3507-T1 Valid prediction for snap_scaffold_4-snap.3532-T1 Valid prediction for GlimmerHMM_glimmerT_10959-T1 Valid prediction for Augustus_model.g7189.t1 Valid prediction for Augustus_model.g7204.t1 Couldn't classify 219186, 219186 Sorry, prediction pasa_asmbl_43258.p1 fails validation. (AGT) AC 219186-219186 GT CAG (TGA) AG 220356-220483 GT AGG (GCC) AG 220776-220988 GT CGG (TGC) AG 221098-221168 GT AGG (TCA) AG 221400-221517 GT AGG (ATC) AG 221828-221893 AA AGA -recovered pasa_asmbl_43258.p1, terminal, 221828, 221893 -recovered pasa_asmbl_43258.p1, internal, 220356, 220483 -recovered pasa_asmbl_43258.p1, internal, 220776, 220988 -recovered pasa_asmbl_43258.p1, internal, 221098, 221168 -recovered pasa_asmbl_43258.p1, internal, 221400, 221517 Valid prediction for snap_scaffold_4-snap.3535-T1 Valid prediction for CodingQuarry_transcript_49316-T1 Valid prediction for Augustus_model.g7206.t1 Valid prediction for snap_scaffold_4-snap.3546-T1 Valid prediction for CodingQuarry_transcript_49314-T1 Couldn't classify 224254, 224634 Sorry, prediction pasa_asmbl_43257.p1 fails validation. (ATG) GA 222793-223128 GT AGG (AAC) AG 223340-223414 GT AGG (GGT) AG 223573-223656 GT CCG (GCC) AG 224025-224174 GT AGG (CGT) AG 224254-224634 CC TCC -recovered pasa_asmbl_43257.p1, initial, 222793, 223128 -recovered pasa_asmbl_43257.p1, internal, 223340, 223414 -recovered pasa_asmbl_43257.p1, internal, 223573, 223656 -recovered pasa_asmbl_43257.p1, internal, 224025, 224174 Valid prediction for Augustus_model.g7201.t1 Valid prediction for snap_scaffold_4-snap.3499-T1 Valid prediction for snap_scaffold_4-snap.3529-T1 Valid prediction for Augustus_model.g7209.t1 Valid prediction for GlimmerHMM_glimmerT_10958-T1 Valid prediction for GlimmerHMM_glimmerT_10979-T1 Valid prediction for CodingQuarry_transcript_49318-T1 Valid prediction for Augustus_model.g7207.t1 Valid prediction for snap_scaffold_4-snap.3505-T1 Valid prediction for snap_scaffold_4-snap.3514-T1 Valid prediction for snap_scaffold_4-snap.3528-T1 Couldn't classify 225412, 225829 Sorry, prediction pasa_asmbl_43254.p1 fails validation. (GCC) GC 225412-225829 GT TGG (TCC) AG 225944-226045 GT AGG (ATC) AG 226386-226532 GT AGG (CAG) AG 227058-227170 CA GAC -recovered pasa_asmbl_43254.p1, terminal, 227058, 227170 -recovered pasa_asmbl_43254.p1, internal, 225944, 226045 -recovered pasa_asmbl_43254.p1, internal, 226386, 226532 Valid prediction for GlimmerHMM_glimmerT_10983-T1 Valid prediction for Augustus_model.g7202.t1 Valid prediction for Augustus_model.g7203.t1 Valid prediction for Augustus_model.g7210.t1 Valid prediction for snap_scaffold_4-snap.3508-T1 Valid prediction for Augustus_model.g7199.t1 Valid prediction for snap_scaffold_4-snap.3519-T1 Valid prediction for Augustus_model.g7188.t1 Valid prediction for Augustus_model.g7200.t1 Valid prediction for snap_scaffold_4-snap.3518-T1 Valid prediction for snap_scaffold_4-snap.3506-T1 Valid prediction for GlimmerHMM_glimmerT_10975-T1 Valid prediction for Augustus_model.g7191.t1 Valid prediction for CodingQuarry_transcript_49315-T1 Valid prediction for snap_scaffold_4-snap.3523-T1 Valid prediction for snap_scaffold_4-snap.3541-T1 Sorry, intron length (8) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_10982-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for Augustus_model.g7205.t1 Valid prediction for GlimmerHMM_glimmerT_10976-T1 Valid prediction for snap_scaffold_4-snap.3503-T1 Valid prediction for CodingQuarry_transcript_49317-T1 Valid prediction for Augustus_model.g7194.t1 Valid prediction for snap_scaffold_4-snap.3522-T1 Valid prediction for snap_scaffold_4-snap.3511-T1 Valid prediction for GlimmerHMM_glimmerT_10966-T1 Valid prediction for GlimmerHMM_glimmerT_10963-T1 Valid prediction for snap_scaffold_4-snap.3502-T1 Valid prediction for snap_scaffold_4-snap.3517-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 5953, rend_intergenic: 3140 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 9813, rend_intergenic: 7648 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17480, rend_intergenic: 15099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22168, rend_intergenic: 18175 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41321, rend_intergenic: 35228 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60930, rend_intergenic: 56127 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67622, rend_intergenic: 62792 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77785, rend_intergenic: 71517 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89511, rend_intergenic: 84400 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97270, rend_intergenic: 91514 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105575, rend_intergenic: 103171 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119612, rend_intergenic: 113480 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136701, rend_intergenic: 120676 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167702, rend_intergenic: 138507 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 182874, rend_intergenic: 179842 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184725, rend_intergenic: 183576 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190526, rend_intergenic: 184925 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199018, rend_intergenic: 195604 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 208283, rend_intergenic: 201544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 229540 -exon list size: 474 building trellis 0.2 0.4 0.6 0.8 1.1 1.3 1.5 1.7 1.9 2.1 2.3 2.5 2.7 2.9 3.2 3.4 3.6 3.8 4.0 4.2 4.4 4.6 4.8 5.0 5.3 5.5 5.7 5.9 6.1 6.3 6.5 6.7 6.9 7.1 7.4 7.6 7.8 8.0 8.2 8.4 8.6 8.8 9.0 9.2 9.5 9.7 9.9 10.1 10.3 10.5 10.7 10.9 11.1 11.3 11.6 11.8 12.0 12.2 12.4 12.6 12.8 13.0 13.2 13.4 13.7 13.9 14.1 14.3 14.5 14.7 14.9 15.1 15.3 15.5 15.8 16.0 16.2 16.4 16.6 16.8 17.0 17.2 17.4 17.6 17.9 18.1 18.3 18.5 18.7 18.9 19.1 19.3 19.5 19.7 20.0 20.2 20.4 20.6 20.8 21.0 21.2 21.4 21.6 21.8 22.1 22.3 22.5 22.7 22.9 23.1 23.3 23.5 23.7 23.9 24.2 24.4 24.6 24.8 25.0 25.2 25.4 25.6 25.8 26.1 26.3 26.5 26.7 26.9 27.1 27.3 27.5 27.7 27.9 28.2 28.4 28.6 28.8 29.0 29.2 29.4 29.6 29.8 30.0 30.3 30.5 30.7 30.9 31.1 31.3 31.5 31.7 31.9 32.1 32.4 32.6 32.8 33.0 33.2 33.4 33.6 33.8 34.0 34.2 34.5 34.7 34.9 35.1 35.3 35.5 35.7 35.9 36.1 36.3 36.6 36.8 37.0 37.2 37.4 37.6 37.8 38.0 38.2 38.4 38.7 38.9 39.1 39.3 39.5 39.7 39.9 40.1 40.3 40.5 40.8 41.0 41.2 41.4 41.6 41.8 42.0 42.2 42.4 42.6 42.9 43.1 43.3 43.5 43.7 43.9 44.1 44.3 44.5 44.7 45.0 45.2 45.4 45.6 45.8 46.0 46.2 46.4 46.6 46.8 47.1 47.3 47.5 47.7 47.9 48.1 48.3 48.5 48.7 48.9 49.2 49.4 49.6 49.8 50.0 50.2 50.4 50.6 50.8 51.1 51.3 51.5 51.7 51.9 52.1 52.3 52.5 52.7 52.9 53.2 53.4 53.6 53.8 54.0 54.2 54.4 54.6 54.8 55.0 55.3 55.5 55.7 55.9 56.1 56.3 56.5 56.7 56.9 57.1 57.4 57.6 57.8 58.0 58.2 58.4 58.6 58.8 59.0 59.2 59.5 59.7 59.9 60.1 60.3 60.5 60.7 60.9 61.1 61.3 61.6 61.8 62.0 62.2 62.4 62.6 62.8 63.0 63.2 63.4 63.7 63.9 64.1 64.3 64.5 64.7 64.9 65.1 65.3 65.5 65.8 66.0 66.2 66.4 66.6 66.8 67.0 67.2 67.4 67.6 67.9 68.1 68.3 68.5 68.7 68.9 69.1 69.3 69.5 69.7 70.0 70.2 70.4 70.6 70.8 71.0 71.2 71.4 71.6 71.8 72.1 72.3 72.5 72.7 72.9 73.1 73.3 73.5 73.7 73.9 74.2 74.4 74.6 74.8 75.0 75.2 75.4 75.6 75.8 76.1 76.3 76.5 76.7 76.9 77.1 77.3 77.5 77.7 77.9 78.2 78.4 78.6 78.8 79.0 79.2 79.4 79.6 79.8 80.0 80.3 80.5 80.7 80.9 81.1 81.3 81.5 81.7 81.9 82.1 82.4 82.6 82.8 83.0 83.2 83.4 83.6 83.8 84.0 84.2 84.5 84.7 84.9 85.1 85.3 85.5 85.7 85.9 86.1 86.3 86.6 86.8 87.0 87.2 87.4 87.6 87.8 88.0 88.2 88.4 88.7 88.9 89.1 89.3 89.5 89.7 89.9 90.1 90.3 90.5 90.8 91.0 91.2 91.4 91.6 91.8 92.0 92.2 92.4 92.6 92.9 93.1 93.3 93.5 93.7 93.9 94.1 94.3 94.5 94.7 95.0 95.2 95.4 95.6 95.8 96.0 96.2 96.4 96.6 96.8 97.1 97.3 97.5 97.7 97.9 98.1 98.3 98.5 98.7 98.9 99.2 99.4 99.6 99.8 -found 32 predictions from path traversal Error with prediction: snap lend_intergenic: 5953, rend_intergenic: 3140 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 9813, rend_intergenic: 7648 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17480, rend_intergenic: 15099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22168, rend_intergenic: 18175 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41321, rend_intergenic: 35228 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60930, rend_intergenic: 56127 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67622, rend_intergenic: 62792 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77785, rend_intergenic: 71517 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89511, rend_intergenic: 84400 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97270, rend_intergenic: 91514 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105575, rend_intergenic: 103171 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119612, rend_intergenic: 113480 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136701, rend_intergenic: 120676 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167702, rend_intergenic: 138507 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 182874, rend_intergenic: 179842 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184725, rend_intergenic: 183576 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190526, rend_intergenic: 184925 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199018, rend_intergenic: 195604 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 208283, rend_intergenic: 201544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 25 predictions persist after filtering for low support -building DP trellis -building trellis in range 213940 - 229540 -exon list size: 3 building trellis 20.0 40.0 60.0 80.0 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 214442 - 229540 -exon list size: 2 building trellis 25.0 50.0 75.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 214442 - 227487 -exon list size: 1 building trellis 33.3 66.7 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -no exons in range 216249 - 227487