-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_4/scaffold_4_12448696-12741667 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_10418-T1 Valid prediction for Augustus_model.g6758.t1 Valid prediction for snap_scaffold_4-snap.2699-T1 Valid prediction for Augustus_model.g6781.t1 Valid prediction for GlimmerHMM_glimmerT_10394-T1 Valid prediction for snap_scaffold_4-snap.2675-T1 Valid prediction for snap_scaffold_4-snap.2656-T1 Valid prediction for snap_scaffold_4-snap.2693-T1 Valid prediction for GlimmerHMM_glimmerT_10411-T1 Valid prediction for snap_scaffold_4-snap.2661-T1 Couldn't classify 276020, 276222 Sorry, prediction pasa_asmbl_41743.p1 fails validation. (GAA) AG 276020-276222 GT AAG (TTG) AG 276380-276549 GT AGG (ACC) AG 277543-277746 GT GAG (GTA) AG 277867-277938 GT GGG (AGA) AG 278487-278555 GT GGG (TTA) AG 278741-278806 GT AGG (ACC) AG 278959-279006 GT AGG (AAG) AG 279284-279367 GT GGG (GCT) AG 279666-280189 GG GAG -recovered pasa_asmbl_41743.p1, terminal, 279666, 280189 -recovered pasa_asmbl_41743.p1, internal, 276020, 276222 -recovered pasa_asmbl_41743.p1, internal, 276380, 276549 -recovered pasa_asmbl_41743.p1, internal, 277543, 277746 -recovered pasa_asmbl_41743.p1, internal, 277867, 277938 -recovered pasa_asmbl_41743.p1, internal, 278487, 278555 -recovered pasa_asmbl_41743.p1, internal, 278741, 278806 -recovered pasa_asmbl_41743.p1, internal, 278959, 279006 -recovered pasa_asmbl_41743.p1, internal, 279284, 279367 Valid prediction for pasa_asmbl_41738.p1 Couldn't classify 8005, 8020 Sorry, prediction pasa_asmbl_41725.p1 fails validation. (CTC) CA 8005-8020 GT AGG (CTC) AG 8218-8565 GT AGG (GAA) AG 8721-8751 GT AGG (GTG) AG 8835-8857 GT AGG (GTC) AG 8991-9148 AA AGA -recovered pasa_asmbl_41725.p1, terminal, 8991, 9148 -recovered pasa_asmbl_41725.p1, internal, 8218, 8565 -recovered pasa_asmbl_41725.p1, internal, 8721, 8751 -recovered pasa_asmbl_41725.p1, internal, 8835, 8857 Valid prediction for snap_scaffold_4-snap.2660-T1 Valid prediction for GlimmerHMM_glimmerT_10395-T1 Valid prediction for Augustus_model.g6756.t1 Valid prediction for snap_scaffold_4-snap.2690-T1 Couldn't classify 7372, 7492 Couldn't classify 7637, 8004 Sorry, prediction pasa_asmbl_41724.p1 fails validation. (GGA) GA 7372-7492 GT TGG (GTG) AG 7637-8004 CT CAC Valid prediction for snap_scaffold_4-snap.2651-T1 Valid prediction for snap_scaffold_4-snap.2697-T1 Valid prediction for pasa_asmbl_41727.p1 Valid prediction for snap_scaffold_4-snap.2668-T1 Valid prediction for HiQ_model.g6774.t1 Valid prediction for Augustus_model.g6784.t1 Couldn't classify 249046, 249552 Sorry, prediction pasa_asmbl_41736.p1 fails validation. (ATG) TA 249046-249552 TG ATT Couldn't classify 156549, 156665 Sorry, prediction pasa_asmbl_41730.p1 fails validation. (ATG) AT 153909-153959 GT GCG (ACA) AG 154856-154948 GT AGG (TTG) AG 155056-155163 GT AGG (GTT) AG 155329-155487 GT AGG (AAC) AG 155695-155772 GT CAG (AAG) AG 156092-156215 GT GGG (TTT) AG 156291-156403 GT AGG (GCA) AG 156549-156665 CA AAC -recovered pasa_asmbl_41730.p1, initial, 153909, 153959 -recovered pasa_asmbl_41730.p1, internal, 154856, 154948 -recovered pasa_asmbl_41730.p1, internal, 155056, 155163 -recovered pasa_asmbl_41730.p1, internal, 155329, 155487 -recovered pasa_asmbl_41730.p1, internal, 155695, 155772 -recovered pasa_asmbl_41730.p1, internal, 156092, 156215 -recovered pasa_asmbl_41730.p1, internal, 156291, 156403 Valid prediction for Augustus_model.g6771.t1 Valid prediction for GlimmerHMM_glimmerT_10401-T1 Valid prediction for GlimmerHMM_glimmerT_10409-T1 Valid prediction for snap_scaffold_4-snap.2695-T1 Valid prediction for snap_scaffold_4-snap.2685-T1 Valid prediction for snap_scaffold_4-snap.2673-T1 Valid prediction for snap_scaffold_4-snap.2678-T1 Valid prediction for GlimmerHMM_glimmerT_10403-T1 Valid prediction for GlimmerHMM_glimmerT_10390-T1 Valid prediction for GlimmerHMM_glimmerT_10413-T1 Valid prediction for Augustus_model.g6761.t1 Valid prediction for snap_scaffold_4-snap.2689-T1 Couldn't classify 139075, 139206 Couldn't classify 140817, 140921 Sorry, prediction pasa_asmbl_41728.p1 fails validation. (AAG) AG 139075-139206 GT ATG (GAA) AG 139915-140005 GT GTG (ATG) AG 140134-140234 GT AGG (GGC) AG 140322-140420 GT CTG (GAA) AG 140817-140921 AC ACA add_exon() Sorry, pasa_asmbl_41728.p1 140134-140234-initial-1 is invalid. -recovered pasa_asmbl_41728.p1, initial, 140134, 140234 -recovered pasa_asmbl_41728.p1, internal, 139075, 139206 -recovered pasa_asmbl_41728.p1, internal, 139915, 140005 -recovered pasa_asmbl_41728.p1, internal, 140134, 140234 -recovered pasa_asmbl_41728.p1, internal, 140322, 140420 Valid prediction for Augustus_model.g6772.t1 Valid prediction for snap_scaffold_4-snap.2657-T1 Valid prediction for snap_scaffold_4-snap.2664-T1 Valid prediction for CodingQuarry_transcript_49162-T1 Valid prediction for snap_scaffold_4-snap.2659-T1 Valid prediction for pasa_asmbl_41731.p1 Valid prediction for HiQ_model.g6759.t1 Valid prediction for snap_scaffold_4-snap.2677-T1 Valid prediction for GlimmerHMM_glimmerT_10404-T1 Valid prediction for Augustus_model.g6778.t1 Valid prediction for HiQ_model.g6789.t1 Couldn't classify 141254, 141412 Sorry, prediction pasa_asmbl_41729.p1 fails validation. (TTT) AC 141254-141412 GT TGG (ATG) AG 142277-142438 GT AGG (AAA) AG 142656-142870 GT ATG (GCC) AG 143130-143316 AA GAA -recovered pasa_asmbl_41729.p1, initial, 142277, 142438 -recovered pasa_asmbl_41729.p1, terminal, 143130, 143316 -recovered pasa_asmbl_41729.p1, internal, 142277, 142438 -recovered pasa_asmbl_41729.p1, internal, 142656, 142870 Valid prediction for snap_scaffold_4-snap.2674-T1 Valid prediction for CodingQuarry_transcript_49147-T1 Valid prediction for GlimmerHMM_glimmerT_10416-T1 Valid prediction for GlimmerHMM_glimmerT_10420-T1 Valid prediction for snap_scaffold_4-snap.2696-T1 Valid prediction for snap_scaffold_4-snap.2654-T1 Couldn't classify 254076, 254402 Sorry, prediction pasa_asmbl_41740.p1 fails validation. (TTT) TT 254076-254402 GT AGG (AAA) AG 254770-254790 GT ATG (GTT) AG 254958-255042 GT GGG (ATT) AG 255162-255265 GT CTG (ATC) AG 256337-256432 GT AAG (CAT) AG 256693-256773 GT AGG (CCC) AG 257135-257253 GT TTG (GCC) AG 257547-257829 GT TTG (AAT) AG 258118-258271 GT AAG (GTG) AG 258821-258967 GT AGG (ACC) AG 260709-260830 GT AGG (ACG) AG 261096-261238 GT AGG (GGT) AG 261454-261557 GT GGG (AAA) AG 261763-261966 GT TGG (GTG) AG 262169-262262 GT ATG (TCT) AG 262936-263043 GT AGG (CCC) AG 263134-263254 GT AGG (ATG) AG 263599-263700 GC GAG add_exon() Sorry, pasa_asmbl_41740.p1 263599-263700-initial-1 is invalid. -recovered pasa_asmbl_41740.p1, initial, 263599, 263700 -recovered pasa_asmbl_41740.p1, terminal, 263599, 263700 -recovered pasa_asmbl_41740.p1, internal, 254770, 254790 -recovered pasa_asmbl_41740.p1, internal, 254958, 255042 -recovered pasa_asmbl_41740.p1, internal, 255162, 255265 -recovered pasa_asmbl_41740.p1, internal, 256337, 256432 -recovered pasa_asmbl_41740.p1, internal, 256693, 256773 -recovered pasa_asmbl_41740.p1, internal, 257135, 257253 -recovered pasa_asmbl_41740.p1, internal, 257547, 257829 -recovered pasa_asmbl_41740.p1, internal, 258118, 258271 -recovered pasa_asmbl_41740.p1, internal, 258821, 258967 -recovered pasa_asmbl_41740.p1, internal, 260709, 260830 -recovered pasa_asmbl_41740.p1, internal, 261096, 261238 -recovered pasa_asmbl_41740.p1, internal, 261454, 261557 -recovered pasa_asmbl_41740.p1, internal, 261763, 261966 -recovered pasa_asmbl_41740.p1, internal, 262169, 262262 -recovered pasa_asmbl_41740.p1, internal, 262936, 263043 -recovered pasa_asmbl_41740.p1, internal, 263134, 263254 -recovered pasa_asmbl_41740.p1, internal, 263599, 263700 Valid prediction for GlimmerHMM_glimmerT_10392-T1 Valid prediction for HiQ_model.g6787.t1 Valid prediction for snap_scaffold_4-snap.2653-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 213371, 213712 Sorry, prediction pasa_asmbl_43590.p1 fails validation. (TCT) CC 213371-213712 AG GAA Couldn't classify 209301, 209634 Sorry, prediction pasa_asmbl_42917.p1 fails validation. (CAA) AC 209301-209634 GT AGG (AAA) AG 209720-209983 GT GGG (AAC) AG 210221-210350 GT AGG (GAG) AG 210471-210522 GT TGG (CCT) AG 210696-210820 GT AGG (GCC) AG 211157-211210 GT AGG (ATG) AG 211596-211605 AG GAA -recovered pasa_asmbl_42917.p1, terminal, 211596, 211605 -recovered pasa_asmbl_42917.p1, internal, 209720, 209983 -recovered pasa_asmbl_42917.p1, internal, 210221, 210350 -recovered pasa_asmbl_42917.p1, internal, 210471, 210522 -recovered pasa_asmbl_42917.p1, internal, 210696, 210820 -recovered pasa_asmbl_42917.p1, internal, 211157, 211210 Valid prediction for CodingQuarry_transcript_49152-T1 Valid prediction for Augustus_model.g6773.t1 Valid prediction for snap_scaffold_4-snap.2679-T1 Valid prediction for GlimmerHMM_glimmerT_10399-T1 Valid prediction for CodingQuarry_transcript_49160-T1 Valid prediction for pasa_asmbl_42952.p1 Valid prediction for pasa_asmbl_42937.p1 Valid prediction for GlimmerHMM_glimmerT_10419-T1 Valid prediction for CodingQuarry_transcript_49155-T1 Valid prediction for Augustus_model.g6757.t1 Valid prediction for GlimmerHMM_glimmerT_10412-T1 Valid prediction for pasa_asmbl_42957.p1 Valid prediction for Augustus_model.g6763.t1 Valid prediction for CodingQuarry_transcript_49154-T1 Valid prediction for CodingQuarry_transcript_49157-T1 Valid prediction for GlimmerHMM_glimmerT_10405-T1 Valid prediction for snap_scaffold_4-snap.2670-T1 Valid prediction for HiQ_model.g6768.t1 Valid prediction for CodingQuarry_transcript_49153-T1 Valid prediction for HiQ_model.g6790.t1 Valid prediction for CodingQuarry_transcript_49149-T1 Valid prediction for pasa_asmbl_42927.p1 Valid prediction for pasa_asmbl_42913.p1 Valid prediction for CodingQuarry_transcript_49148-T1 Valid prediction for Augustus_model.g6775.t1 Valid prediction for Augustus_model.g6764.t1 Valid prediction for CodingQuarry_transcript_49163-T1 Valid prediction for Augustus_model.g6786.t1 Valid prediction for GlimmerHMM_glimmerT_10396-T1 Valid prediction for snap_scaffold_4-snap.2669-T1 Valid prediction for snap_scaffold_4-snap.2687-T1 Valid prediction for Augustus_model.g6762.t1 Valid prediction for snap_scaffold_4-snap.2681-T1 Valid prediction for CodingQuarry_transcript_49151-T1 Valid prediction for snap_scaffold_4-snap.2676-T1 Valid prediction for HiQ_model.g6776.t1 Valid prediction for Augustus_model.g6780.t1 Couldn't classify 214967, 215198 Sorry, prediction pasa_asmbl_42914.p1 fails validation. (GCT) AA 214967-215198 GT TGG (AAC) AG 215436-215556 GT AGG (GTT) AG 215855-215906 GT CGG (CCT) AG 216266-216349 GT AAG (CAG) AG 217292-217324 CC GAC -recovered pasa_asmbl_42914.p1, terminal, 217292, 217324 -recovered pasa_asmbl_42914.p1, internal, 215436, 215556 -recovered pasa_asmbl_42914.p1, internal, 215855, 215906 -recovered pasa_asmbl_42914.p1, internal, 216266, 216349 Valid prediction for Augustus_model.g6777.t1 Valid prediction for HiQ_model.g6769.t1 Valid prediction for GlimmerHMM_glimmerT_10393-T1 Couldn't classify 2640, 3005 Sorry, prediction pasa_asmbl_43563.p1 fails validation. (GCT) CA 2640-3005 GT AGG (CAC) AG 3238-3390 GT CAG (TTG) AG 4257-4334 GT ATG (AAC) AG 4743-4892 GT ATG (GAA) AG 5142-5309 GT AGG (GCT) AG 5501-5692 GT AGG (GAG) AG 6010-6201 GT AGG (CAA) AG 6389-6460 AG GAA -recovered pasa_asmbl_43563.p1, terminal, 6389, 6460 -recovered pasa_asmbl_43563.p1, internal, 3238, 3390 -recovered pasa_asmbl_43563.p1, internal, 4257, 4334 -recovered pasa_asmbl_43563.p1, internal, 4743, 4892 -recovered pasa_asmbl_43563.p1, internal, 5142, 5309 -recovered pasa_asmbl_43563.p1, internal, 5501, 5692 -recovered pasa_asmbl_43563.p1, internal, 6010, 6201 Valid prediction for GlimmerHMM_glimmerT_10422-T1 Valid prediction for snap_scaffold_4-snap.2703-T1 Valid prediction for HiQ_model.g6788.t1 Valid prediction for pasa_asmbl_43543.p1 Valid prediction for HiQ_model.g6782.t1 Valid prediction for CodingQuarry_transcript_49156-T1 Valid prediction for GlimmerHMM_glimmerT_10391-T1 Couldn't classify 183294, 183311 Sorry, prediction pasa_asmbl_42926.p1 fails validation. (GAG) CG 183294-183311 GT TGG (GCA) AG 184891-184960 GT TGG (GCA) AG 185250-185329 GT AGG (AAA) AG 185950-186042 GT TGG (ATC) AG 186142-186324 GT AGG (CTG) AG 186481-186557 GT TCG (GCC) AG 186817-186974 GT AGG (AGG) AG 187124-187353 TG GAT -recovered pasa_asmbl_42926.p1, terminal, 187124, 187353 -recovered pasa_asmbl_42926.p1, internal, 184891, 184960 -recovered pasa_asmbl_42926.p1, internal, 185250, 185329 -recovered pasa_asmbl_42926.p1, internal, 185950, 186042 -recovered pasa_asmbl_42926.p1, internal, 186142, 186324 -recovered pasa_asmbl_42926.p1, internal, 186481, 186557 -recovered pasa_asmbl_42926.p1, internal, 186817, 186974 Valid prediction for Augustus_model.g6770.t1 Valid prediction for snap_scaffold_4-snap.2694-T1 Valid prediction for snap_scaffold_4-snap.2658-T1 Valid prediction for GlimmerHMM_glimmerT_10421-T1 Valid prediction for pasa_asmbl_42945.p1 Valid prediction for GlimmerHMM_glimmerT_10415-T1 Valid prediction for snap_scaffold_4-snap.2652-T1 Couldn't classify 164694, 164777 Couldn't classify 166684, 166818 Sorry, prediction pasa_asmbl_42933.p1 fails validation. (CTC) AC 164694-164777 GT AGG (AGC) AG 165000-165112 GT AGG (TGT) AG 165419-165598 GT GTG (GCA) AG 165700-165790 GT AGG (CTT) AG 166212-166391 GT CTG (ATT) AG 166684-166818 AC ACA -recovered pasa_asmbl_42933.p1, internal, 165000, 165112 -recovered pasa_asmbl_42933.p1, internal, 165419, 165598 -recovered pasa_asmbl_42933.p1, internal, 165700, 165790 -recovered pasa_asmbl_42933.p1, internal, 166212, 166391 Valid prediction for snap_scaffold_4-snap.2663-T1 Valid prediction for HiQ_model.g6767.t1 Valid prediction for snap_scaffold_4-snap.2680-T1 Valid prediction for GlimmerHMM_glimmerT_10406-T1 Valid prediction for Augustus_model.g6791.t1 Valid prediction for GlimmerHMM_glimmerT_10407-T1 Valid prediction for pasa_asmbl_42935.p1 Couldn't classify 1727, 1862 Couldn't classify 1993, 2573 Sorry, prediction pasa_asmbl_43613.p1 fails validation. (GGG) GT 1727-1862 GT GGG (GTA) AG 1993-2573 TC CGT Valid prediction for GlimmerHMM_glimmerT_10397-T1 Valid prediction for snap_scaffold_4-snap.2655-T1 Couldn't classify 98395, 98431 Sorry, prediction pasa_asmbl_42942.p1 fails validation. (GGG) AC 98395-98431 GT GTG (ATG) AG 98593-98895 GT GAG (AGA) AG 99143-99242 GT AAG (GGA) AG 100599-100659 AC GAA add_exon() Sorry, pasa_asmbl_42942.p1 98593-98895-initial-1 is invalid. -recovered pasa_asmbl_42942.p1, initial, 98593, 98895 -recovered pasa_asmbl_42942.p1, terminal, 100599, 100659 -recovered pasa_asmbl_42942.p1, internal, 98593, 98895 -recovered pasa_asmbl_42942.p1, internal, 99143, 99242 Valid prediction for pasa_asmbl_42923.p1 Valid prediction for CodingQuarry_transcript_49150-T1 Valid prediction for snap_scaffold_4-snap.2701-T1 Valid prediction for snap_scaffold_4-snap.2692-T1 Couldn't classify 97281, 97468 Sorry, prediction pasa_asmbl_42944.p1 fails validation. (ATG) CC 96041-96086 GT AGG (ACG) AG 96669-97037 GT GGG (AAC) AG 97281-97468 CT CCC -recovered pasa_asmbl_42944.p1, initial, 96041, 96086 -recovered pasa_asmbl_42944.p1, internal, 96669, 97037 Valid prediction for snap_scaffold_4-snap.2666-T1 Valid prediction for snap_scaffold_4-snap.2684-T1 Valid prediction for snap_scaffold_4-snap.2683-T1 Couldn't classify 167095, 167180 Sorry, prediction pasa_asmbl_42930.p1 fails validation. (CAG) AA 167095-167180 GT AGG (GTT) AG 167296-167405 GT GGG (CAT) AG 167555-167717 GT AGG (TGG) AG 167907-168115 GT TAG (ATG) AG 168394-168517 GT AAG (GTG) AG 168877-168982 GT AGG (CTA) AG 169065-169254 GT AGG (AGT) AG 169453-169529 GT AGG (GGA) AG 169708-169803 GT AGG (GTG) AG 170096-170215 GT CGG (GGG) AG 170300-170412 GT GGG (CCA) AG 170652-170778 GT AGG (TTG) AG 171012-171070 GT CGG (ATC) AG 171298-171430 TC GAT add_exon() Sorry, pasa_asmbl_42930.p1 168394-168517-initial-1 is invalid. -recovered pasa_asmbl_42930.p1, initial, 168394, 168517 -recovered pasa_asmbl_42930.p1, terminal, 171298, 171430 -recovered pasa_asmbl_42930.p1, internal, 167296, 167405 -recovered pasa_asmbl_42930.p1, internal, 167555, 167717 -recovered pasa_asmbl_42930.p1, internal, 167907, 168115 -recovered pasa_asmbl_42930.p1, internal, 168394, 168517 -recovered pasa_asmbl_42930.p1, internal, 168877, 168982 -recovered pasa_asmbl_42930.p1, internal, 169065, 169254 -recovered pasa_asmbl_42930.p1, internal, 169453, 169529 -recovered pasa_asmbl_42930.p1, internal, 169708, 169803 -recovered pasa_asmbl_42930.p1, internal, 170096, 170215 -recovered pasa_asmbl_42930.p1, internal, 170300, 170412 -recovered pasa_asmbl_42930.p1, internal, 170652, 170778 -recovered pasa_asmbl_42930.p1, internal, 171012, 171070 Valid prediction for HiQ_model.g6765.t1 Valid prediction for HiQ_model.g6783.t1 Valid prediction for CodingQuarry_transcript_49158-T1 Valid prediction for Augustus_model.g6779.t1 Valid prediction for snap_scaffold_4-snap.2691-T1 Valid prediction for snap_scaffold_4-snap.2672-T1 Valid prediction for HiQ_model.g6760.t1 Valid prediction for snap_scaffold_4-snap.2698-T1 Valid prediction for GlimmerHMM_glimmerT_10417-T1 Valid prediction for pasa_asmbl_42919.p1 Valid prediction for GlimmerHMM_glimmerT_10408-T1 Valid prediction for snap_scaffold_4-snap.2682-T1 Valid prediction for HiQ_model.g6785.t1 Valid prediction for snap_scaffold_4-snap.2665-T1 Valid prediction for HiQ_model.g6766.t1 Valid prediction for snap_scaffold_4-snap.2667-T1 Valid prediction for GlimmerHMM_glimmerT_10410-T1 Valid prediction for snap_scaffold_4-snap.2662-T1 Valid prediction for snap_scaffold_4-snap.2702-T1 Valid prediction for snap_scaffold_4-snap.2688-T1 Valid prediction for GlimmerHMM_glimmerT_10423-T1 Valid prediction for GlimmerHMM_glimmerT_10398-T1 Couldn't classify 162256, 162699 Sorry, prediction pasa_asmbl_42934.p1 fails validation. (AAC) CA 162256-162699 CG ATC Valid prediction for GlimmerHMM_glimmerT_10414-T1 Valid prediction for Augustus_model.g6792.t1 Valid prediction for snap_scaffold_4-snap.2671-T1 Valid prediction for pasa_asmbl_42954.p1 Valid prediction for pasa_asmbl_42936.p1 Valid prediction for GlimmerHMM_glimmerT_10400-T1 Valid prediction for CodingQuarry_transcript_49164-T1 Valid prediction for snap_scaffold_4-snap.2686-T1 Valid prediction for snap_scaffold_4-snap.2700-T1 Valid prediction for GlimmerHMM_glimmerT_10402-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 31196, rend_intergenic: 25834 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57501, rend_intergenic: 54546 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103107, rend_intergenic: 93637 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 292972 -exon list size: 594 building trellis 0.2 0.3 0.5 0.7 0.8 1.0 1.2 1.3 1.5 1.7 1.8 2.0 2.2 2.3 2.5 2.7 2.9 3.0 3.2 3.4 3.5 3.7 3.9 4.0 4.2 4.4 4.5 4.7 4.9 5.0 5.2 5.4 5.5 5.7 5.9 6.0 6.2 6.4 6.5 6.7 6.9 7.0 7.2 7.4 7.6 7.7 7.9 8.1 8.2 8.4 8.6 8.7 8.9 9.1 9.2 9.4 9.6 9.7 9.9 10.1 10.2 10.4 10.6 10.7 10.9 11.1 11.2 11.4 11.6 11.7 11.9 12.1 12.2 12.4 12.6 12.8 12.9 13.1 13.3 13.4 13.6 13.8 13.9 14.1 14.3 14.4 14.6 14.8 14.9 15.1 15.3 15.4 15.6 15.8 15.9 16.1 16.3 16.4 16.6 16.8 16.9 17.1 17.3 17.4 17.6 17.8 18.0 18.1 18.3 18.5 18.6 18.8 19.0 19.1 19.3 19.5 19.6 19.8 20.0 20.1 20.3 20.5 20.6 20.8 21.0 21.1 21.3 21.5 21.6 21.8 22.0 22.1 22.3 22.5 22.7 22.8 23.0 23.2 23.3 23.5 23.7 23.8 24.0 24.2 24.3 24.5 24.7 24.8 25.0 25.2 25.3 25.5 25.7 25.8 26.0 26.2 26.3 26.5 26.7 26.8 27.0 27.2 27.3 27.5 27.7 27.9 28.0 28.2 28.4 28.5 28.7 28.9 29.0 29.2 29.4 29.5 29.7 29.9 30.0 30.2 30.4 30.5 30.7 30.9 31.0 31.2 31.4 31.5 31.7 31.9 32.0 32.2 32.4 32.6 32.7 32.9 33.1 33.2 33.4 33.6 33.7 33.9 34.1 34.2 34.4 34.6 34.7 34.9 35.1 35.2 35.4 35.6 35.7 35.9 36.1 36.2 36.4 36.6 36.7 36.9 37.1 37.2 37.4 37.6 37.8 37.9 38.1 38.3 38.4 38.6 38.8 38.9 39.1 39.3 39.4 39.6 39.8 39.9 40.1 40.3 40.4 40.6 40.8 40.9 41.1 41.3 41.4 41.6 41.8 41.9 42.1 42.3 42.4 42.6 42.8 43.0 43.1 43.3 43.5 43.6 43.8 44.0 44.1 44.3 44.5 44.6 44.8 45.0 45.1 45.3 45.5 45.6 45.8 46.0 46.1 46.3 46.5 46.6 46.8 47.0 47.1 47.3 47.5 47.7 47.8 48.0 48.2 48.3 48.5 48.7 48.8 49.0 49.2 49.3 49.5 49.7 49.8 50.0 50.2 50.3 50.5 50.7 50.8 51.0 51.2 51.3 51.5 51.7 51.8 52.0 52.2 52.3 52.5 52.7 52.9 53.0 53.2 53.4 53.5 53.7 53.9 54.0 54.2 54.4 54.5 54.7 54.9 55.0 55.2 55.4 55.5 55.7 55.9 56.0 56.2 56.4 56.5 56.7 56.9 57.0 57.2 57.4 57.6 57.7 57.9 58.1 58.2 58.4 58.6 58.7 58.9 59.1 59.2 59.4 59.6 59.7 59.9 60.1 60.2 60.4 60.6 60.7 60.9 61.1 61.2 61.4 61.6 61.7 61.9 62.1 62.2 62.4 62.6 62.8 62.9 63.1 63.3 63.4 63.6 63.8 63.9 64.1 64.3 64.4 64.6 64.8 64.9 65.1 65.3 65.4 65.6 65.8 65.9 66.1 66.3 66.4 66.6 66.8 66.9 67.1 67.3 67.4 67.6 67.8 68.0 68.1 68.3 68.5 68.6 68.8 69.0 69.1 69.3 69.5 69.6 69.8 70.0 70.1 70.3 70.5 70.6 70.8 71.0 71.1 71.3 71.5 71.6 71.8 72.0 72.1 72.3 72.5 72.7 72.8 73.0 73.2 73.3 73.5 73.7 73.8 74.0 74.2 74.3 74.5 74.7 74.8 75.0 75.2 75.3 75.5 75.7 75.8 76.0 76.2 76.3 76.5 76.7 76.8 77.0 77.2 77.3 77.5 77.7 77.9 78.0 78.2 78.4 78.5 78.7 78.9 79.0 79.2 79.4 79.5 79.7 79.9 80.0 80.2 80.4 80.5 80.7 80.9 81.0 81.2 81.4 81.5 81.7 81.9 82.0 82.2 82.4 82.6 82.7 82.9 83.1 83.2 83.4 83.6 83.7 83.9 84.1 84.2 84.4 84.6 84.7 84.9 85.1 85.2 85.4 85.6 85.7 85.9 86.1 86.2 86.4 86.6 86.7 86.9 87.1 87.2 87.4 87.6 87.8 87.9 88.1 88.3 88.4 88.6 88.8 88.9 89.1 89.3 89.4 89.6 89.8 89.9 90.1 90.3 90.4 90.6 90.8 90.9 91.1 91.3 91.4 91.6 91.8 91.9 92.1 92.3 92.4 92.6 92.8 93.0 93.1 93.3 93.5 93.6 93.8 94.0 94.1 94.3 94.5 94.6 94.8 95.0 95.1 95.3 95.5 95.6 95.8 96.0 96.1 96.3 96.5 96.6 96.8 97.0 97.1 97.3 97.5 97.7 97.8 98.0 98.2 98.3 98.5 98.7 98.8 99.0 99.2 99.3 99.5 99.7 99.8 -found 45 predictions from path traversal Error with prediction: snap lend_intergenic: 31196, rend_intergenic: 25834 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57501, rend_intergenic: 54546 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103107, rend_intergenic: 93637 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 45 predictions persist after filtering for low support