-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_398

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_398-snap.2-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2797, 2860
Sorry, prediction snap_scaffold_398-snap.1-T1 fails validation.
(GTG)	 AG	2797-2860	GT	ATG
(GCT)	 AG	3318-3393	GT	CGG
(TGA)	 AG	4771-4809	GT	GGG
(GCG)	 AG	6979-7127	TT	AAT
-recovered snap_scaffold_398-snap.1-T1, terminal, 6979, 7127
-recovered snap_scaffold_398-snap.1-T1, internal, 2797, 2860
-recovered snap_scaffold_398-snap.1-T1, internal, 3318, 3393
-recovered snap_scaffold_398-snap.1-T1, internal, 4771, 4809
Valid prediction for GlimmerHMM_glimmerT_60289-T1
Valid prediction for Augustus_model.g39909.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4528, rend_intergenic: 305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 7324
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 4528, rend_intergenic: 305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support