-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_388

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g39901.t1
Couldn't classify 840, 1037
Sorry, prediction snap_scaffold_388-snap.1-T1 fails validation.
(TCT)	 AG	840-1037	GT	TAG
(CTC)	 AG	4115-4248	GA	GAG
-recovered snap_scaffold_388-snap.1-T1, terminal, 4115, 4248
-recovered snap_scaffold_388-snap.1-T1, internal, 840, 1037

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60279-T1
Valid prediction for snap_scaffold_388-snap.2-T1
Valid prediction for snap_scaffold_388-snap.3-T1
add_exon() Sorry, snap_scaffold_388-snap.3-T1 837-1033-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4248, rend_intergenic: 937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 7452
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 2 predictions from path traversal
Error with prediction: snap lend_intergenic: 4248, rend_intergenic: 937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support