-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_380

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 3738, 4036
Sorry, prediction snap_scaffold_380-snap.2-T1 fails validation.
(AGC)	 AG	3738-4036	GT	CGG
(ACA)	 AG	4341-4904	GT	CTG
(GGG)	 AG	5083-5095	GA	AAG
-recovered snap_scaffold_380-snap.2-T1, terminal, 5083, 5095
-recovered snap_scaffold_380-snap.2-T1, internal, 3738, 4036
-recovered snap_scaffold_380-snap.2-T1, internal, 4341, 4904
Couldn't classify 5310, 5530
Sorry, prediction snap_scaffold_380-snap.1-T1 fails validation.
(ATG)	 TG	5203-5296	GT	GGG
(GAG)	 AG	5310-5530	GT	AAG
-recovered snap_scaffold_380-snap.1-T1, initial, 5203, 5296
-recovered snap_scaffold_380-snap.1-T1, internal, 5310, 5530

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 7536
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support