-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_363

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 3379, 3448
Couldn't classify 7652, 7731
Sorry, prediction snap_scaffold_363-snap.2-T1 fails validation.
(CCT)	 AG	3379-3448	GT	GCG
(ATA)	 AG	6940-7062	GT	AGG
(GTG)	 AG	7652-7731	GT	AGG
-recovered snap_scaffold_363-snap.2-T1, internal, 3379, 3448
-recovered snap_scaffold_363-snap.2-T1, internal, 6940, 7062
-recovered snap_scaffold_363-snap.2-T1, internal, 7652, 7731

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 7515, 7705
Sorry, prediction snap_scaffold_363-snap.1-T1 fails validation.
(ATG)	 AG	103-130	GT	CAG
(GAC)	 AG	4338-4404	GT	GGG
(GTC)	 AG	7515-7705	GT	AGG
-recovered snap_scaffold_363-snap.1-T1, initial, 103, 130
-recovered snap_scaffold_363-snap.1-T1, internal, 103, 130
-recovered snap_scaffold_363-snap.1-T1, internal, 4338, 4404
-recovered snap_scaffold_363-snap.1-T1, internal, 7515, 7705

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7642, rend_intergenic: 3379  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 7744
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 7642, rend_intergenic: 3379  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support