-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_360

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 7614, 7735
Sorry, prediction snap_scaffold_360-snap.2-T1 fails validation.
(ATG)	 CC	7146-7248	GT	AGG
(CTG)	 AG	7614-7735	GT	AGG
-recovered snap_scaffold_360-snap.2-T1, initial, 7146, 7248
-recovered snap_scaffold_360-snap.2-T1, internal, 7614, 7735
Couldn't classify 797, 1160
Sorry, prediction snap_scaffold_360-snap.1-T1 fails validation.
(GGC)	 AG	797-1160	GT	GGG
(AGC)	 AG	6616-6728	GT	CAG
(AGA)	 AG	6915-7008	AG	AGA
-recovered snap_scaffold_360-snap.1-T1, terminal, 6915, 7008
-recovered snap_scaffold_360-snap.1-T1, internal, 797, 1160
-recovered snap_scaffold_360-snap.1-T1, internal, 6616, 6728

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 7755
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support