-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_351

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 805, 1046
Sorry, prediction snap_scaffold_351-snap.2-T1 fails validation.
(TCC)	 AG	805-1046	GT	GAG
(GTT)	 AG	4091-4147	TT	GAT
-recovered snap_scaffold_351-snap.2-T1, terminal, 4091, 4147
-recovered snap_scaffold_351-snap.2-T1, internal, 805, 1046

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60238-T1
Couldn't classify 7040, 7287
Sorry, prediction snap_scaffold_351-snap.1-T1 fails validation.
(ATG)	 AA	4933-4938	GT	TTG
(AGT)	 AG	7040-7287	GT	ATG
-recovered snap_scaffold_351-snap.1-T1, initial, 4933, 4938
-recovered snap_scaffold_351-snap.1-T1, internal, 7040, 7287
Valid prediction for snap_scaffold_351-snap.3-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 2905, rend_intergenic: 805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 4147, rend_intergenic: 3096  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 7837
-exon list size: 8


building trellis

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-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 2905, rend_intergenic: 805  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 4147, rend_intergenic: 3096  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support