-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_3432

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_61857-T1
Couldn't classify 158, 498
Sorry, prediction snap_scaffold_3432-snap.1-T1 fails validation.
(GTG)	 AG	158-498	GT	AGG
-recovered snap_scaffold_3432-snap.1-T1, internal, 158, 498
Couldn't classify 937, 1019
Sorry, prediction Augustus_model.g41158.t1 fails validation.
(ATG)	 CG	110-498	GT	AGG
(GTC)	 AG	937-1019		CC
-recovered Augustus_model.g41158.t1, initial, 110, 498

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1019
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support