-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_343

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 517, 634
Couldn't classify 5980, 6283
Sorry, prediction snap_scaffold_343-snap.1-T1 fails validation.
(GTA)	 AG	517-634	GT	AGG
(GAT)	 AG	4112-4188	GT	TGG
(GAG)	 AG	5980-6283	GT	AGG
-recovered snap_scaffold_343-snap.1-T1, internal, 517, 634
-recovered snap_scaffold_343-snap.1-T1, internal, 4112, 4188
-recovered snap_scaffold_343-snap.1-T1, internal, 5980, 6283

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 5138, 5452
Sorry, prediction snap_scaffold_343-snap.2-T1 fails validation.
(GGC)	 AG	5138-5452	GT	GGG
-recovered snap_scaffold_343-snap.2-T1, internal, 5138, 5452

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6283, rend_intergenic: 2512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 7963
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 6283, rend_intergenic: 2512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support