-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_3397

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 794, 985
Sorry, prediction snap_scaffold_3397-snap.1-T1 fails validation.
(CGG)	 AG	794-985	GT	AGG
-recovered snap_scaffold_3397-snap.1-T1, internal, 794, 985
Couldn't classify 794, 985
Sorry, prediction Augustus_model.g41149.t1 fails validation.
(ATG)	 AA	417-474	GT	AAG
(CGG)	 AG	794-985	GT	AGG
-recovered Augustus_model.g41149.t1, initial, 417, 474
-recovered Augustus_model.g41149.t1, internal, 794, 985

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1023
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support