-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_338

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 4701, 5188
Couldn't classify 6901, 6975
Sorry, prediction snap_scaffold_338-snap.1-T1 fails validation.
(GTC)	 AG	4701-5188	GT	GAG
(GGT)	 AG	5369-5454	GT	CAG
(AGC)	 AG	6901-6975	GT	GGG
-recovered snap_scaffold_338-snap.1-T1, internal, 4701, 5188
-recovered snap_scaffold_338-snap.1-T1, internal, 5369, 5454
-recovered snap_scaffold_338-snap.1-T1, internal, 6901, 6975

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 8000
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support