-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_3/scaffold_3_3929613-4275610

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_6347-T1
Valid prediction for snap_scaffold_3-snap.873-T1
Valid prediction for snap_scaffold_3-snap.845-T1
Valid prediction for CodingQuarry_transcript_46128-T1
Valid prediction for GlimmerHMM_glimmerT_6370-T1
Valid prediction for Augustus_model.g4138.t1
Valid prediction for GlimmerHMM_glimmerT_6359-T1
Valid prediction for snap_scaffold_3-snap.859-T1
Valid prediction for GlimmerHMM_glimmerT_6385-T1
Valid prediction for GlimmerHMM_glimmerT_6383-T1
Valid prediction for Augustus_model.g4121.t1
Valid prediction for GlimmerHMM_glimmerT_6345-T1
Valid prediction for snap_scaffold_3-snap.909-T1
Valid prediction for Augustus_model.g4130.t1
Valid prediction for GlimmerHMM_glimmerT_6376-T1
Valid prediction for snap_scaffold_3-snap.854-T1
Valid prediction for snap_scaffold_3-snap.894-T1
Valid prediction for snap_scaffold_3-snap.888-T1
Valid prediction for snap_scaffold_3-snap.871-T1
Valid prediction for snap_scaffold_3-snap.849-T1
Valid prediction for Augustus_model.g4135.t1
Valid prediction for snap_scaffold_3-snap.874-T1
Valid prediction for snap_scaffold_3-snap.847-T1
Valid prediction for snap_scaffold_3-snap.902-T1
Valid prediction for snap_scaffold_3-snap.855-T1
Valid prediction for GlimmerHMM_glimmerT_6364-T1
Valid prediction for Augustus_model.g4129.t1
Valid prediction for snap_scaffold_3-snap.904-T1
Valid prediction for GlimmerHMM_glimmerT_6357-T1
Valid prediction for snap_scaffold_3-snap.848-T1
Valid prediction for GlimmerHMM_glimmerT_6374-T1
Valid prediction for snap_scaffold_3-snap.907-T1
Valid prediction for snap_scaffold_3-snap.868-T1
Valid prediction for Augustus_model.g4117.t1
Valid prediction for snap_scaffold_3-snap.912-T1
Valid prediction for snap_scaffold_3-snap.853-T1
Valid prediction for GlimmerHMM_glimmerT_6358-T1
Valid prediction for snap_scaffold_3-snap.843-T1
Valid prediction for pasa_asmbl_39985.p1
Valid prediction for snap_scaffold_3-snap.896-T1
Valid prediction for GlimmerHMM_glimmerT_6379-T1
Valid prediction for Augustus_model.g4133.t1
Valid prediction for snap_scaffold_3-snap.913-T1
Valid prediction for snap_scaffold_3-snap.901-T1
Valid prediction for Augustus_model.g4131.t1
Valid prediction for pasa_asmbl_38792.p2
Valid prediction for GlimmerHMM_glimmerT_6381-T1
Valid prediction for Augustus_model.g4127.t1
Valid prediction for snap_scaffold_3-snap.851-T1
Valid prediction for snap_scaffold_3-snap.891-T1
Valid prediction for snap_scaffold_3-snap.898-T1
Valid prediction for snap_scaffold_3-snap.856-T1
Valid prediction for snap_scaffold_3-snap.908-T1
Valid prediction for Augustus_model.g4125.t1
Valid prediction for snap_scaffold_3-snap.899-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for snap_scaffold_3-snap.864-T1
Valid prediction for Augustus_model.g4124.t1
Valid prediction for snap_scaffold_3-snap.858-T1
Valid prediction for snap_scaffold_3-snap.863-T1
Valid prediction for snap_scaffold_3-snap.887-T1
Valid prediction for snap_scaffold_3-snap.892-T1
Valid prediction for GlimmerHMM_glimmerT_6369-T1
Valid prediction for snap_scaffold_3-snap.870-T1
Valid prediction for snap_scaffold_3-snap.876-T1
Valid prediction for snap_scaffold_3-snap.880-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for snap_scaffold_3-snap.882-T1
Valid prediction for Augustus_model.g4118.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g4128.t1
Valid prediction for snap_scaffold_3-snap.906-T1
Valid prediction for GlimmerHMM_glimmerT_6351-T1
Valid prediction for GlimmerHMM_glimmerT_6373-T1
Valid prediction for snap_scaffold_3-snap.879-T1
Valid prediction for GlimmerHMM_glimmerT_6386-T1
Valid prediction for snap_scaffold_3-snap.897-T1
Valid prediction for GlimmerHMM_glimmerT_6350-T1
Valid prediction for snap_scaffold_3-snap.881-T1
Valid prediction for snap_scaffold_3-snap.867-T1
Valid prediction for GlimmerHMM_glimmerT_6355-T1
Valid prediction for snap_scaffold_3-snap.911-T1
Valid prediction for GlimmerHMM_glimmerT_6346-T1
Valid prediction for GlimmerHMM_glimmerT_6343-T1
Valid prediction for Augustus_model.g4115.t1
Valid prediction for GlimmerHMM_glimmerT_6387-T1
Valid prediction for snap_scaffold_3-snap.846-T1
Valid prediction for snap_scaffold_3-snap.885-T1
Valid prediction for GlimmerHMM_glimmerT_6367-T1
Valid prediction for snap_scaffold_3-snap.852-T1
Valid prediction for GlimmerHMM_glimmerT_6371-T1
Valid prediction for snap_scaffold_3-snap.905-T1
Valid prediction for Augustus_model.g4134.t1
Valid prediction for snap_scaffold_3-snap.884-T1
Valid prediction for Augustus_model.g4120.t1
Valid prediction for GlimmerHMM_glimmerT_6353-T1
Valid prediction for snap_scaffold_3-snap.883-T1
Valid prediction for GlimmerHMM_glimmerT_6365-T1
Valid prediction for snap_scaffold_3-snap.910-T1
Valid prediction for snap_scaffold_3-snap.865-T1
Valid prediction for GlimmerHMM_glimmerT_6352-T1
Valid prediction for GlimmerHMM_glimmerT_6344-T1
Valid prediction for Augustus_model.g4132.t1
Valid prediction for snap_scaffold_3-snap.914-T1
Valid prediction for snap_scaffold_3-snap.861-T1
Valid prediction for GlimmerHMM_glimmerT_6361-T1
Valid prediction for GlimmerHMM_glimmerT_6360-T1
Valid prediction for snap_scaffold_3-snap.900-T1
Valid prediction for GlimmerHMM_glimmerT_6372-T1
Valid prediction for snap_scaffold_3-snap.878-T1
Valid prediction for GlimmerHMM_glimmerT_6375-T1
Valid prediction for snap_scaffold_3-snap.860-T1
Valid prediction for snap_scaffold_3-snap.889-T1
Valid prediction for GlimmerHMM_glimmerT_6349-T1
Valid prediction for snap_scaffold_3-snap.869-T1
Valid prediction for GlimmerHMM_glimmerT_6368-T1
Valid prediction for GlimmerHMM_glimmerT_6362-T1
Valid prediction for GlimmerHMM_glimmerT_6382-T1
Valid prediction for snap_scaffold_3-snap.875-T1
Valid prediction for Augustus_model.g4126.t1
Valid prediction for GlimmerHMM_glimmerT_6348-T1
Valid prediction for snap_scaffold_3-snap.866-T1
Valid prediction for pasa_asmbl_38798.p1
Valid prediction for snap_scaffold_3-snap.872-T1
Valid prediction for snap_scaffold_3-snap.886-T1
Valid prediction for snap_scaffold_3-snap.857-T1
Valid prediction for GlimmerHMM_glimmerT_6366-T1
Valid prediction for HiQ_model.g4136.t1
Valid prediction for GlimmerHMM_glimmerT_6378-T1
Valid prediction for GlimmerHMM_glimmerT_6354-T1
Valid prediction for Augustus_model.g4116.t1
Valid prediction for Augustus_model.g4137.t1
Valid prediction for Augustus_model.g4122.t1
Couldn't classify 47933, 47980
Couldn't classify 48486, 48561
Sorry, prediction CodingQuarry_transcript_46126-T1 fails validation.
(ATG)	 CA	45103-45166	GT	AGG
(ACT)	 AG	45454-45522	GT	AGG
(GTG)	 AG	45775-45882	GT	GGG
(ATG)	 AG	45971-46047	GT	AGG
(GGG)	 AG	46296-46410	GT	AGG
(AGG)	 AG	46586-46650	GT	AGG
(GTG)	 AG	46927-47032	GT	TGG
(AGG)	 AG	47694-47775	GT	CAG
(GTT)	 AG	47933-47980	TT	GTT
(GAG)	 GG	48486-48561	GT	AAG
(CCA)	 AG	48924-49034	CT	GAC
-recovered CodingQuarry_transcript_46126-T1, initial, 45103, 45166
-recovered CodingQuarry_transcript_46126-T1, initial, 45971, 46047
-recovered CodingQuarry_transcript_46126-T1, terminal, 48924, 49034
-recovered CodingQuarry_transcript_46126-T1, internal, 45454, 45522
-recovered CodingQuarry_transcript_46126-T1, internal, 45775, 45882
-recovered CodingQuarry_transcript_46126-T1, internal, 45971, 46047
-recovered CodingQuarry_transcript_46126-T1, internal, 46296, 46410
-recovered CodingQuarry_transcript_46126-T1, internal, 46586, 46650
-recovered CodingQuarry_transcript_46126-T1, internal, 46927, 47032
-recovered CodingQuarry_transcript_46126-T1, internal, 47694, 47775
Valid prediction for snap_scaffold_3-snap.877-T1
Couldn't classify 47933, 47981
Couldn't classify 48487, 48561
Sorry, prediction CodingQuarry_transcript_46125-T1 fails validation.
(ATG)	 CA	45103-45166	GT	AGG
(ACT)	 AG	45454-45522	GT	AGG
(GTG)	 AG	45775-45882	GT	GGG
(ATG)	 AG	45971-46047	GT	AGG
(GGG)	 AG	46296-46410	GT	AGG
(AGG)	 AG	46586-46650	GT	AGG
(GTG)	 AG	46927-47032	GT	TGG
(AGG)	 AG	47694-47775	GT	CAG
(GTT)	 AG	47933-47981	TG	TTT
(AGG)	 GG	48487-48561	GT	AAG
(CCA)	 AG	48924-49034	CT	GAC
-recovered CodingQuarry_transcript_46125-T1, initial, 45103, 45166
-recovered CodingQuarry_transcript_46125-T1, initial, 45971, 46047
-recovered CodingQuarry_transcript_46125-T1, terminal, 48924, 49034
-recovered CodingQuarry_transcript_46125-T1, internal, 45454, 45522
-recovered CodingQuarry_transcript_46125-T1, internal, 45775, 45882
-recovered CodingQuarry_transcript_46125-T1, internal, 45971, 46047
-recovered CodingQuarry_transcript_46125-T1, internal, 46296, 46410
-recovered CodingQuarry_transcript_46125-T1, internal, 46586, 46650
-recovered CodingQuarry_transcript_46125-T1, internal, 46927, 47032
-recovered CodingQuarry_transcript_46125-T1, internal, 47694, 47775
Valid prediction for GlimmerHMM_glimmerT_6380-T1
Valid prediction for snap_scaffold_3-snap.895-T1
Valid prediction for snap_scaffold_3-snap.903-T1
Valid prediction for GlimmerHMM_glimmerT_6384-T1
Valid prediction for Augustus_model.g4119.t1
Valid prediction for snap_scaffold_3-snap.893-T1
Valid prediction for GlimmerHMM_glimmerT_6356-T1
Valid prediction for snap_scaffold_3-snap.890-T1
Valid prediction for snap_scaffold_3-snap.844-T1
Valid prediction for snap_scaffold_3-snap.850-T1
Valid prediction for GlimmerHMM_glimmerT_6342-T1
Valid prediction for GlimmerHMM_glimmerT_6363-T1
Valid prediction for Augustus_model.g4139.t1
Valid prediction for snap_scaffold_3-snap.862-T1
Valid prediction for Augustus_model.g4123.t1
Valid prediction for GlimmerHMM_glimmerT_6377-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15924, rend_intergenic: 2832  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17668, rend_intergenic: 15939  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21471, rend_intergenic: 18696  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30777, rend_intergenic: 22456  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38599, rend_intergenic: 33081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44255, rend_intergenic: 44132  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79294, rend_intergenic: 44828  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90686, rend_intergenic: 79390  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128244, rend_intergenic: 101704  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130846, rend_intergenic: 128316  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138617, rend_intergenic: 131018  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140536, rend_intergenic: 138920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145163, rend_intergenic: 140541  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162517, rend_intergenic: 145239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173124, rend_intergenic: 166423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177030, rend_intergenic: 175131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181813, rend_intergenic: 177618  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195231, rend_intergenic: 181901  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216597, rend_intergenic: 195270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219900, rend_intergenic: 216839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232101, rend_intergenic: 220112  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 242515, rend_intergenic: 232504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 253320, rend_intergenic: 245277  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256377, rend_intergenic: 253429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268480, rend_intergenic: 257438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 274857, rend_intergenic: 271295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 286011, rend_intergenic: 277507  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 290223, rend_intergenic: 288248  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 299465, rend_intergenic: 297549  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 311235, rend_intergenic: 305185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 318243, rend_intergenic: 312004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 320137, rend_intergenic: 318943  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 329963, rend_intergenic: 327114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 345998
-exon list size: 587


building trellis

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67.6    
67.7    
67.9    
68.1    
68.3    
68.4    
68.6    
68.8    
68.9    
69.1    
69.3    
69.4    
69.6    
69.8    
69.9    
70.1    
70.3    
70.5    
70.6    
70.8    
71.0    
71.1    
71.3    
71.5    
71.6    
71.8    
72.0    
72.2    
72.3    
72.5    
72.7    
72.8    
73.0    
73.2    
73.3    
73.5    
73.7    
73.9    
74.0    
74.2    
74.4    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.6    
75.7    
75.9    
76.1    
76.2    
76.4    
76.6    
76.7    
76.9    
77.1    
77.2    
77.4    
77.6    
77.8    
77.9    
78.1    
78.3    
78.4    
78.6    
78.8    
78.9    
79.1    
79.3    
79.5    
79.6    
79.8    
80.0    
80.1    
80.3    
80.5    
80.6    
80.8    
81.0    
81.2    
81.3    
81.5    
81.7    
81.8    
82.0    
82.2    
82.3    
82.5    
82.7    
82.9    
83.0    
83.2    
83.4    
83.5    
83.7    
83.9    
84.0    
84.2    
84.4    
84.6    
84.7    
84.9    
85.1    
85.2    
85.4    
85.6    
85.7    
85.9    
86.1    
86.2    
86.4    
86.6    
86.8    
86.9    
87.1    
87.3    
87.4    
87.6    
87.8    
87.9    
88.1    
88.3    
88.5    
88.6    
88.8    
89.0    
89.1    
89.3    
89.5    
89.6    
89.8    
90.0    
90.2    
90.3    
90.5    
90.7    
90.8    
91.0    
91.2    
91.3    
91.5    
91.7    
91.9    
92.0    
92.2    
92.4    
92.5    
92.7    
92.9    
93.0    
93.2    
93.4    
93.5    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.7    
94.9    
95.1    
95.2    
95.4    
95.6    
95.8    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
96.9    
97.1    
97.3    
97.5    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 53 predictions from path traversal
Error with prediction: snap lend_intergenic: 15924, rend_intergenic: 2832  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17668, rend_intergenic: 15939  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21471, rend_intergenic: 18696  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30777, rend_intergenic: 22456  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38599, rend_intergenic: 33081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44255, rend_intergenic: 44132  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79294, rend_intergenic: 44828  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90686, rend_intergenic: 79390  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128244, rend_intergenic: 101704  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130846, rend_intergenic: 128316  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138617, rend_intergenic: 131018  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140536, rend_intergenic: 138920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145163, rend_intergenic: 140541  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162517, rend_intergenic: 145239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173124, rend_intergenic: 166423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177030, rend_intergenic: 175131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181813, rend_intergenic: 177618  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195231, rend_intergenic: 181901  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216597, rend_intergenic: 195270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219900, rend_intergenic: 216839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232101, rend_intergenic: 220112  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 242515, rend_intergenic: 232504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 253320, rend_intergenic: 245277  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256377, rend_intergenic: 253429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268480, rend_intergenic: 257438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 274857, rend_intergenic: 271295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 286011, rend_intergenic: 277507  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 290223, rend_intergenic: 288248  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 299465, rend_intergenic: 297549  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 311235, rend_intergenic: 305185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 318243, rend_intergenic: 312004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 320137, rend_intergenic: 318943  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 329963, rend_intergenic: 327114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 15 predictions persist after filtering for low support