-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_3/scaffold_3_16704612-16902547

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_3-snap.3236-T1
Valid prediction for CodingQuarry_transcript_46424-T1
Valid prediction for pasa_asmbl_40632.p1
Valid prediction for snap_scaffold_3-snap.3225-T1
Valid prediction for GlimmerHMM_glimmerT_8078-T1
Valid prediction for GlimmerHMM_glimmerT_8066-T1
Valid prediction for snap_scaffold_3-snap.3222-T1
Valid prediction for GlimmerHMM_glimmerT_8084-T1
Valid prediction for Augustus_model.g5338.t1
Valid prediction for snap_scaffold_3-snap.3235-T1
Valid prediction for GlimmerHMM_glimmerT_8083-T1
Valid prediction for snap_scaffold_3-snap.3248-T1
Valid prediction for Augustus_model.g5326.t1
Valid prediction for snap_scaffold_3-snap.3254-T1
Valid prediction for GlimmerHMM_glimmerT_8067-T1
Valid prediction for snap_scaffold_3-snap.3229-T1
Valid prediction for snap_scaffold_3-snap.3221-T1
Valid prediction for snap_scaffold_3-snap.3239-T1
Valid prediction for Augustus_model.g5336.t1
Valid prediction for snap_scaffold_3-snap.3245-T1
Valid prediction for snap_scaffold_3-snap.3220-T1
Valid prediction for Augustus_model.g5340.t1
Valid prediction for GlimmerHMM_glimmerT_8086-T1
Valid prediction for Augustus_model.g5337.t1
Valid prediction for snap_scaffold_3-snap.3215-T1
Valid prediction for snap_scaffold_3-snap.3228-T1
Valid prediction for GlimmerHMM_glimmerT_8068-T1
Valid prediction for snap_scaffold_3-snap.3213-T1
Valid prediction for GlimmerHMM_glimmerT_8081-T1
Valid prediction for GlimmerHMM_glimmerT_8096-T1
Valid prediction for Augustus_model.g5332.t1
Valid prediction for snap_scaffold_3-snap.3217-T1
Valid prediction for Augustus_model.g5344.t1
Valid prediction for Augustus_model.g5335.t1
Valid prediction for GlimmerHMM_glimmerT_8090-T1
Valid prediction for snap_scaffold_3-snap.3223-T1
Valid prediction for snap_scaffold_3-snap.3252-T1
Valid prediction for snap_scaffold_3-snap.3253-T1
Valid prediction for GlimmerHMM_glimmerT_8080-T1
Valid prediction for GlimmerHMM_glimmerT_8060-T1
Valid prediction for GlimmerHMM_glimmerT_8070-T1
Valid prediction for snap_scaffold_3-snap.3242-T1
Couldn't classify 144158, 144236
Couldn't classify 144938, 144966
Sorry, prediction pasa_asmbl_40886.p2 fails validation.
(GAC)	 TC	144158-144236	GT	AGG
(AGT)	 AG	144585-144800	GT	CGG
(GGG)	 AG	144938-144966	GA	AGG
-recovered pasa_asmbl_40886.p2, internal, 144585, 144800
Valid prediction for GlimmerHMM_glimmerT_8063-T1
Valid prediction for GlimmerHMM_glimmerT_8099-T1
Valid prediction for snap_scaffold_3-snap.3234-T1
Valid prediction for Augustus_model.g5327.t1
Valid prediction for Augustus_model.g5329.t1
Valid prediction for snap_scaffold_3-snap.3251-T1
Valid prediction for Augustus_model.g5330.t1
Valid prediction for snap_scaffold_3-snap.3241-T1
Valid prediction for GlimmerHMM_glimmerT_8089-T1
Valid prediction for snap_scaffold_3-snap.3218-T1
Valid prediction for GlimmerHMM_glimmerT_8100-T1
Valid prediction for Augustus_model.g5345.t1
Valid prediction for GlimmerHMM_glimmerT_8075-T1
Valid prediction for GlimmerHMM_glimmerT_8062-T1
Valid prediction for snap_scaffold_3-snap.3207-T1
Valid prediction for GlimmerHMM_glimmerT_8071-T1
Valid prediction for snap_scaffold_3-snap.3208-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_3-snap.3247-T1
Valid prediction for GlimmerHMM_glimmerT_8098-T1
Valid prediction for Augustus_model.g5343.t1
Valid prediction for GlimmerHMM_glimmerT_8093-T1
Valid prediction for snap_scaffold_3-snap.3216-T1
Valid prediction for GlimmerHMM_glimmerT_8091-T1
Valid prediction for GlimmerHMM_glimmerT_8082-T1
Couldn't classify 127296, 127425
Couldn't classify 127530, 127534
Sorry, prediction CodingQuarry_transcript_46423-T1 fails validation.
(ATG)	 AA	125326-125338	GT	AGG
(AAC)	 AG	125757-125921	GT	AGG
(GCG)	 AG	126075-126202	GT	AGG
(CCC)	 AG	126335-126392	GT	AGG
(GTT)	 AG	126484-126616	GT	GGG
(CTT)	 AG	127059-127128	GT	TGG
(ATG)	 AG	127296-127425	TG	GGT
(CGT)	 AC	127530-127534	AT	GAA
-recovered CodingQuarry_transcript_46423-T1, initial, 125326, 125338
add_exon() Sorry, CodingQuarry_transcript_46423-T1 125757-125921-terminal-1 is invalid.
-recovered CodingQuarry_transcript_46423-T1, terminal, 125757, 125921
-recovered CodingQuarry_transcript_46423-T1, internal, 125757, 125921
-recovered CodingQuarry_transcript_46423-T1, internal, 126075, 126202
-recovered CodingQuarry_transcript_46423-T1, internal, 126335, 126392
-recovered CodingQuarry_transcript_46423-T1, internal, 126484, 126616
-recovered CodingQuarry_transcript_46423-T1, internal, 127059, 127128
Couldn't classify 49887, 49973
Sorry, prediction pasa_asmbl_39517.p1 fails validation.
(TGC)	 CA	49887-49973	GT	AGG
(CAT)	 AG	50102-50162	GT	AGG
(AGA)	 AG	50712-50861	GT	AGG
(GGG)	 AG	51353-51459	AC	AAA
add_exon() Sorry, pasa_asmbl_39517.p1 50102-50162-terminal-3 is invalid.
-recovered pasa_asmbl_39517.p1, terminal, 50102, 50162
-recovered pasa_asmbl_39517.p1, terminal, 51353, 51459
-recovered pasa_asmbl_39517.p1, internal, 50102, 50162
-recovered pasa_asmbl_39517.p1, internal, 50712, 50861
Valid prediction for CodingQuarry_transcript_46428-T1
Valid prediction for Augustus_model.g5341.t1
Valid prediction for snap_scaffold_3-snap.3232-T1
Valid prediction for snap_scaffold_3-snap.3230-T1
Valid prediction for GlimmerHMM_glimmerT_8094-T1
Valid prediction for Augustus_model.g5339.t1
Valid prediction for snap_scaffold_3-snap.3224-T1
Valid prediction for GlimmerHMM_glimmerT_8069-T1
Valid prediction for GlimmerHMM_glimmerT_8085-T1
Valid prediction for Augustus_model.g5328.t1
Valid prediction for snap_scaffold_3-snap.3226-T1
Couldn't classify 41346, 41375
Couldn't classify 41657, 41980
Sorry, prediction pasa_asmbl_39519.p1 fails validation.
(CAG)	 AC	41346-41375	GT	TGG
(AGA)	 AG	41492-41548	GT	CAG
(ATG)	 AG	41657-41980	GG	AAG
-recovered pasa_asmbl_39519.p1, internal, 41492, 41548
Valid prediction for snap_scaffold_3-snap.3219-T1
Valid prediction for Augustus_model.g5333.t1
Valid prediction for snap_scaffold_3-snap.3240-T1
Valid prediction for GlimmerHMM_glimmerT_8073-T1
Valid prediction for snap_scaffold_3-snap.3227-T1
Valid prediction for snap_scaffold_3-snap.3249-T1
Valid prediction for GlimmerHMM_glimmerT_8095-T1
Valid prediction for snap_scaffold_3-snap.3214-T1
Valid prediction for Augustus_model.g5325.t1
Valid prediction for GlimmerHMM_glimmerT_8065-T1
Valid prediction for snap_scaffold_3-snap.3212-T1
Valid prediction for GlimmerHMM_glimmerT_8087-T1
Valid prediction for GlimmerHMM_glimmerT_8074-T1
Valid prediction for GlimmerHMM_glimmerT_8092-T1
Valid prediction for snap_scaffold_3-snap.3246-T1
Valid prediction for snap_scaffold_3-snap.3233-T1
Valid prediction for snap_scaffold_3-snap.3209-T1
Valid prediction for GlimmerHMM_glimmerT_8072-T1
Valid prediction for snap_scaffold_3-snap.3244-T1
Valid prediction for GlimmerHMM_glimmerT_8088-T1
Valid prediction for CodingQuarry_transcript_46426-T1
Valid prediction for Augustus_model.g5346.t1
Valid prediction for snap_scaffold_3-snap.3206-T1
Valid prediction for GlimmerHMM_glimmerT_8101-T1
Valid prediction for HiQ_model.g5334.t1
Valid prediction for Augustus_model.g5342.t1
Valid prediction for snap_scaffold_3-snap.3211-T1
Valid prediction for GlimmerHMM_glimmerT_8079-T1
Valid prediction for GlimmerHMM_glimmerT_8064-T1
Valid prediction for GlimmerHMM_glimmerT_8077-T1
Valid prediction for CodingQuarry_transcript_46425-T1
Valid prediction for snap_scaffold_3-snap.3231-T1
Valid prediction for CodingQuarry_transcript_46427-T1
Valid prediction for Augustus_model.g5331.t1
Valid prediction for GlimmerHMM_glimmerT_8061-T1
Valid prediction for snap_scaffold_3-snap.3238-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_8076-T1
Valid prediction for pasa_asmbl_39516.p1
Valid prediction for snap_scaffold_3-snap.3250-T1
Valid prediction for snap_scaffold_3-snap.3243-T1
Valid prediction for snap_scaffold_3-snap.3237-T1
Valid prediction for GlimmerHMM_glimmerT_8097-T1
Valid prediction for snap_scaffold_3-snap.3210-T1
Valid prediction for snap_scaffold_3-snap.3255-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10259, rend_intergenic: 8074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31251, rend_intergenic: 29042  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36200, rend_intergenic: 32048  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39841, rend_intergenic: 36769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40907, rend_intergenic: 40164  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46974, rend_intergenic: 40988  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49999, rend_intergenic: 48842  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63902, rend_intergenic: 50811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64199, rend_intergenic: 64030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68517, rend_intergenic: 65060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80798, rend_intergenic: 73779  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96364, rend_intergenic: 83939  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111961, rend_intergenic: 100910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120730, rend_intergenic: 117133  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128283, rend_intergenic: 123519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132490, rend_intergenic: 128399  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139222, rend_intergenic: 132986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145014, rend_intergenic: 140893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151462, rend_intergenic: 146270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156233, rend_intergenic: 151566  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159038, rend_intergenic: 156547  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162351, rend_intergenic: 159294  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173943, rend_intergenic: 162519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 197936
-exon list size: 492


building trellis

0.2    
0.4    
0.6    
0.8    
1.0    
1.2    
1.4    
1.6    
1.8    
2.0    
2.2    
2.4    
2.6    
2.8    
3.0    
3.2    
3.4    
3.6    
3.8    
4.0    
4.3    
4.5    
4.7    
4.9    
5.1    
5.3    
5.5    
5.7    
5.9    
6.1    
6.3    
6.5    
6.7    
6.9    
7.1    
7.3    
7.5    
7.7    
7.9    
8.1    
8.3    
8.5    
8.7    
8.9    
9.1    
9.3    
9.5    
9.7    
9.9    
10.1    
10.3    
10.5    
10.7    
10.9    
11.1    
11.3    
11.5    
11.7    
11.9    
12.1    
12.3    
12.6    
12.8    
13.0    
13.2    
13.4    
13.6    
13.8    
14.0    
14.2    
14.4    
14.6    
14.8    
15.0    
15.2    
15.4    
15.6    
15.8    
16.0    
16.2    
16.4    
16.6    
16.8    
17.0    
17.2    
17.4    
17.6    
17.8    
18.0    
18.2    
18.4    
18.6    
18.8    
19.0    
19.2    
19.4    
19.6    
19.8    
20.0    
20.2    
20.4    
20.6    
20.9    
21.1    
21.3    
21.5    
21.7    
21.9    
22.1    
22.3    
22.5    
22.7    
22.9    
23.1    
23.3    
23.5    
23.7    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.1    
25.3    
25.5    
25.7    
25.9    
26.1    
26.3    
26.5    
26.7    
26.9    
27.1    
27.3    
27.5    
27.7    
27.9    
28.1    
28.3    
28.5    
28.7    
28.9    
29.1    
29.4    
29.6    
29.8    
30.0    
30.2    
30.4    
30.6    
30.8    
31.0    
31.2    
31.4    
31.6    
31.8    
32.0    
32.2    
32.4    
32.6    
32.8    
33.0    
33.2    
33.4    
33.6    
33.8    
34.0    
34.2    
34.4    
34.6    
34.8    
35.0    
35.2    
35.4    
35.6    
35.8    
36.0    
36.2    
36.4    
36.6    
36.8    
37.0    
37.2    
37.4    
37.7    
37.9    
38.1    
38.3    
38.5    
38.7    
38.9    
39.1    
39.3    
39.5    
39.7    
39.9    
40.1    
40.3    
40.5    
40.7    
40.9    
41.1    
41.3    
41.5    
41.7    
41.9    
42.1    
42.3    
42.5    
42.7    
42.9    
43.1    
43.3    
43.5    
43.7    
43.9    
44.1    
44.3    
44.5    
44.7    
44.9    
45.1    
45.3    
45.5    
45.7    
46.0    
46.2    
46.4    
46.6    
46.8    
47.0    
47.2    
47.4    
47.6    
47.8    
48.0    
48.2    
48.4    
48.6    
48.8    
49.0    
49.2    
49.4    
49.6    
49.8    
50.0    
50.2    
50.4    
50.6    
50.8    
51.0    
51.2    
51.4    
51.6    
51.8    
52.0    
52.2    
52.4    
52.6    
52.8    
53.0    
53.2    
53.4    
53.6    
53.8    
54.0    
54.3    
54.5    
54.7    
54.9    
55.1    
55.3    
55.5    
55.7    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.3    
57.5    
57.7    
57.9    
58.1    
58.3    
58.5    
58.7    
58.9    
59.1    
59.3    
59.5    
59.7    
59.9    
60.1    
60.3    
60.5    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.9    
62.1    
62.3    
62.6    
62.8    
63.0    
63.2    
63.4    
63.6    
63.8    
64.0    
64.2    
64.4    
64.6    
64.8    
65.0    
65.2    
65.4    
65.6    
65.8    
66.0    
66.2    
66.4    
66.6    
66.8    
67.0    
67.2    
67.4    
67.6    
67.8    
68.0    
68.2    
68.4    
68.6    
68.8    
69.0    
69.2    
69.4    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.9    
71.1    
71.3    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.1    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
76.9    
77.1    
77.3    
77.5    
77.7    
77.9    
78.1    
78.3    
78.5    
78.7    
78.9    
79.1    
79.4    
79.6    
79.8    
80.0    
80.2    
80.4    
80.6    
80.8    
81.0    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.8    
83.0    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.8    
86.0    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.7    
87.9    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.5    
89.7    
89.9    
90.1    
90.3    
90.5    
90.7    
90.9    
91.1    
91.3    
91.5    
91.7    
91.9    
92.1    
92.3    
92.5    
92.7    
92.9    
93.1    
93.3    
93.5    
93.7    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
96.0    
96.2    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 10259, rend_intergenic: 8074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31251, rend_intergenic: 29042  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36200, rend_intergenic: 32048  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39841, rend_intergenic: 36769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40907, rend_intergenic: 40164  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46974, rend_intergenic: 40988  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49999, rend_intergenic: 48842  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63902, rend_intergenic: 50811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64199, rend_intergenic: 64030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68517, rend_intergenic: 65060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80798, rend_intergenic: 73779  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96364, rend_intergenic: 83939  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111961, rend_intergenic: 100910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120730, rend_intergenic: 117133  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128283, rend_intergenic: 123519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132490, rend_intergenic: 128399  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139222, rend_intergenic: 132986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145014, rend_intergenic: 140893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151462, rend_intergenic: 146270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156233, rend_intergenic: 151566  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159038, rend_intergenic: 156547  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162351, rend_intergenic: 159294  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173943, rend_intergenic: 162519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support