-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_282

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g39814.t1
Valid prediction for snap_scaffold_282-snap.2-T1
Valid prediction for GlimmerHMM_glimmerT_60127-T1
add_exon() Sorry, GlimmerHMM_glimmerT_60127-T1 6078-6301-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 760, 810
Sorry, prediction snap_scaffold_282-snap.1-T1 fails validation.
(AAC)	 AG	760-810	GT	CGG
(CTC)	 AG	1974-2113	GT	CAG
(GTG)	 AG	2462-2920	GT	CAG
(CTC)	 AG	4047-4184	CG	AAC
-recovered snap_scaffold_282-snap.1-T1, terminal, 4047, 4184
-recovered snap_scaffold_282-snap.1-T1, internal, 760, 810
-recovered snap_scaffold_282-snap.1-T1, internal, 1974, 2113
-recovered snap_scaffold_282-snap.1-T1, internal, 2462, 2920

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7841, rend_intergenic: 4484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 8600
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 7841, rend_intergenic: 4484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support