-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_28/scaffold_28_4696888-4942399

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_58716-T1
Valid prediction for snap_scaffold_28-snap.1146-T1
Valid prediction for snap_scaffold_28-snap.1138-T1
Valid prediction for snap_scaffold_28-snap.1125-T1
Couldn't classify 236382, 236945
Sorry, prediction pasa_asmbl_37552.p1 fails validation.
(ACG)	 CA	236382-236945	AA	GAA
Valid prediction for HiQ_model.g38891.t1
Valid prediction for Augustus_model.g38901.t1
Valid prediction for snap_scaffold_28-snap.1147-T1
Valid prediction for GlimmerHMM_glimmerT_58736-T1
Valid prediction for GlimmerHMM_glimmerT_58705-T1
Valid prediction for GlimmerHMM_glimmerT_58722-T1
Valid prediction for Augustus_model.g38907.t1
Couldn't classify 13236, 13463
Sorry, prediction pasa_asmbl_37544.p1 fails validation.
(GCG)	 TA	13236-13463	GT	AGG
(GTG)	 AG	14131-14240	GT	AGG
(AGA)	 AG	14885-14985	GT	AGG
(GGC)	 AG	15077-15294	GA	GAG
-recovered pasa_asmbl_37544.p1, terminal, 15077, 15294
-recovered pasa_asmbl_37544.p1, internal, 14131, 14240
-recovered pasa_asmbl_37544.p1, internal, 14885, 14985
Valid prediction for snap_scaffold_28-snap.1101-T1
Valid prediction for snap_scaffold_28-snap.1123-T1
Valid prediction for GlimmerHMM_glimmerT_58710-T1
Valid prediction for Augustus_model.g38898.t1
Valid prediction for Augustus_model.g38909.t1
Valid prediction for snap_scaffold_28-snap.1127-T1
Valid prediction for Augustus_model.g38912.t1
Valid prediction for Augustus_model.g38904.t1
Valid prediction for GlimmerHMM_glimmerT_58720-T1
Valid prediction for Augustus_model.g38895.t1
Valid prediction for snap_scaffold_28-snap.1134-T1
Valid prediction for HiQ_model.g38897.t1
Valid prediction for snap_scaffold_28-snap.1113-T1
Valid prediction for snap_scaffold_28-snap.1109-T1
Valid prediction for GlimmerHMM_glimmerT_58727-T1
Valid prediction for snap_scaffold_28-snap.1112-T1
Valid prediction for Augustus_model.g38900.t1
Valid prediction for CodingQuarry_transcript_43643-T1
Valid prediction for GlimmerHMM_glimmerT_58733-T1
Valid prediction for snap_scaffold_28-snap.1105-T1
Valid prediction for Augustus_model.g38905.t1
Valid prediction for pasa_asmbl_37548.p1
Couldn't classify 57974, 58069
Couldn't classify 58218, 58279
Sorry, prediction CodingQuarry_transcript_43644-T1 fails validation.
(ATG)	 CG	54716-54803	GT	AGG
(ACA)	 AG	56568-56637	GT	CAG
(AAT)	 AG	56759-56814	GT	AGG
(GCA)	 AG	56914-56985	GT	AGG
(ATC)	 AG	57205-57224	GT	AGG
(ACA)	 AG	57366-57522	GT	AGG
(ACT)	 AG	57974-58069	AT	CGA
(CTC)	 AC	58218-58279	GT	AGG
(CTG)	 AG	58385-58406	GT	AGG
(TGT)	 AG	58530-58635	GT	TGG
(GTA)	 AG	59458-59545	GT	AGG
(ATC)	 AG	59838-59936	AG	AGA
-recovered CodingQuarry_transcript_43644-T1, initial, 54716, 54803
-recovered CodingQuarry_transcript_43644-T1, terminal, 59838, 59936
-recovered CodingQuarry_transcript_43644-T1, internal, 56568, 56637
-recovered CodingQuarry_transcript_43644-T1, internal, 56759, 56814
-recovered CodingQuarry_transcript_43644-T1, internal, 56914, 56985
-recovered CodingQuarry_transcript_43644-T1, internal, 57205, 57224
-recovered CodingQuarry_transcript_43644-T1, internal, 57366, 57522
-recovered CodingQuarry_transcript_43644-T1, internal, 58385, 58406
-recovered CodingQuarry_transcript_43644-T1, internal, 58530, 58635
-recovered CodingQuarry_transcript_43644-T1, internal, 59458, 59545
Valid prediction for snap_scaffold_28-snap.1128-T1
Valid prediction for GlimmerHMM_glimmerT_58711-T1
Valid prediction for GlimmerHMM_glimmerT_58723-T1
Valid prediction for Augustus_model.g38916.t1
Valid prediction for snap_scaffold_28-snap.1117-T1
Valid prediction for snap_scaffold_28-snap.1116-T1
Valid prediction for snap_scaffold_28-snap.1106-T1
Couldn't classify 57974, 58069
Couldn't classify 58218, 58279
Sorry, prediction pasa_asmbl_37545.p1 fails validation.
(ATG)	 TA	54692-54803	GT	AGG
(ACA)	 AG	56568-56637	GT	CAG
(AAT)	 AG	56759-56814	GT	AGG
(GCA)	 AG	56914-56985	GT	AGG
(ATC)	 AG	57205-57224	GT	AGG
(ACA)	 AG	57366-57522	GT	AGG
(ACT)	 AG	57974-58069	AT	CGA
(CTC)	 AC	58218-58279	GT	AGG
(CTG)	 AG	58385-58406	GT	AGG
(TGT)	 AG	58530-58635	GT	TGG
(GTA)	 AG	59458-59545	GT	AGG
(ATC)	 AG	59838-59936	AG	AGA
-recovered pasa_asmbl_37545.p1, initial, 54692, 54803
-recovered pasa_asmbl_37545.p1, terminal, 59838, 59936
-recovered pasa_asmbl_37545.p1, internal, 56568, 56637
-recovered pasa_asmbl_37545.p1, internal, 56759, 56814
-recovered pasa_asmbl_37545.p1, internal, 56914, 56985
-recovered pasa_asmbl_37545.p1, internal, 57205, 57224
-recovered pasa_asmbl_37545.p1, internal, 57366, 57522
-recovered pasa_asmbl_37545.p1, internal, 58385, 58406
-recovered pasa_asmbl_37545.p1, internal, 58530, 58635
-recovered pasa_asmbl_37545.p1, internal, 59458, 59545
Valid prediction for Augustus_model.g38915.t1
Valid prediction for GlimmerHMM_glimmerT_58724-T1
Valid prediction for snap_scaffold_28-snap.1122-T1
Valid prediction for GlimmerHMM_glimmerT_58713-T1
Valid prediction for snap_scaffold_28-snap.1141-T1
Valid prediction for Augustus_model.g38910.t1
Valid prediction for snap_scaffold_28-snap.1143-T1
Valid prediction for Augustus_model.g38913.t1
Valid prediction for GlimmerHMM_glimmerT_58726-T1
Valid prediction for HiQ_model.g38906.t1
Valid prediction for snap_scaffold_28-snap.1129-T1
Valid prediction for GlimmerHMM_glimmerT_58712-T1
Valid prediction for GlimmerHMM_glimmerT_58714-T1
Valid prediction for snap_scaffold_28-snap.1118-T1
Valid prediction for CodingQuarry_transcript_43645-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_28-snap.1103-T1
Valid prediction for GlimmerHMM_glimmerT_58706-T1
Valid prediction for snap_scaffold_28-snap.1114-T1
Valid prediction for GlimmerHMM_glimmerT_58718-T1
Valid prediction for GlimmerHMM_glimmerT_58703-T1
Valid prediction for snap_scaffold_28-snap.1137-T1
Valid prediction for GlimmerHMM_glimmerT_58730-T1
Valid prediction for Augustus_model.g38890.t1
Valid prediction for GlimmerHMM_glimmerT_58708-T1
Valid prediction for GlimmerHMM_glimmerT_58731-T1
Valid prediction for Augustus_model.g38902.t1
Valid prediction for snap_scaffold_28-snap.1135-T1
Couldn't classify 208737, 208865
Couldn't classify 214359, 214485
Sorry, prediction pasa_asmbl_38226.p1 fails validation.
(TCA)	 CC	208737-208865	GT	TTG
(GCA)	 AG	209569-209640	GT	AGG
(AAG)	 AG	210152-210253	GT	GGG
(CTT)	 AG	210483-210528	GT	GGG
(TTC)	 AG	211019-211115	GT	AGG
(AGA)	 AG	211910-212023	GT	TGG
(GAT)	 AG	212594-212685	GT	AGG
(CGG)	 AG	212893-212986	GT	TGG
(GTC)	 AG	214359-214485	AC	TCA
add_exon() Sorry, pasa_asmbl_38226.p1 212594-212685-terminal-2 is invalid.
-recovered pasa_asmbl_38226.p1, terminal, 212594, 212685
-recovered pasa_asmbl_38226.p1, internal, 209569, 209640
-recovered pasa_asmbl_38226.p1, internal, 210152, 210253
-recovered pasa_asmbl_38226.p1, internal, 210483, 210528
-recovered pasa_asmbl_38226.p1, internal, 211019, 211115
-recovered pasa_asmbl_38226.p1, internal, 211910, 212023
-recovered pasa_asmbl_38226.p1, internal, 212594, 212685
-recovered pasa_asmbl_38226.p1, internal, 212893, 212986
Valid prediction for snap_scaffold_28-snap.1148-T1
Valid prediction for Augustus_model.g38894.t1
Valid prediction for snap_scaffold_28-snap.1126-T1
Valid prediction for snap_scaffold_28-snap.1107-T1
Valid prediction for CodingQuarry_transcript_43641-T1
Valid prediction for snap_scaffold_28-snap.1140-T1
Valid prediction for snap_scaffold_28-snap.1133-T1
Valid prediction for Augustus_model.g38899.t1
Valid prediction for pasa_asmbl_38222.p1
Valid prediction for snap_scaffold_28-snap.1145-T1
Valid prediction for snap_scaffold_28-snap.1130-T1
Valid prediction for snap_scaffold_28-snap.1120-T1
Valid prediction for GlimmerHMM_glimmerT_58715-T1
Valid prediction for GlimmerHMM_glimmerT_58729-T1
Valid prediction for GlimmerHMM_glimmerT_58725-T1
Valid prediction for Augustus_model.g38893.t1
Valid prediction for Augustus_model.g38911.t1
Valid prediction for snap_scaffold_28-snap.1144-T1
Valid prediction for snap_scaffold_28-snap.1104-T1
Valid prediction for GlimmerHMM_glimmerT_58721-T1
Valid prediction for snap_scaffold_28-snap.1142-T1
Valid prediction for GlimmerHMM_glimmerT_58704-T1
Valid prediction for snap_scaffold_28-snap.1139-T1
Valid prediction for HiQ_model.g38889.t1
Valid prediction for snap_scaffold_28-snap.1136-T1
Valid prediction for snap_scaffold_28-snap.1121-T1
Valid prediction for Augustus_model.g38914.t1
Valid prediction for GlimmerHMM_glimmerT_58734-T1
Valid prediction for GlimmerHMM_glimmerT_58732-T1
Valid prediction for snap_scaffold_28-snap.1131-T1
Valid prediction for GlimmerHMM_glimmerT_58735-T1
Valid prediction for GlimmerHMM_glimmerT_58709-T1
Valid prediction for snap_scaffold_28-snap.1119-T1
Valid prediction for GlimmerHMM_glimmerT_58719-T1
Couldn't classify 217900, 218067
Couldn't classify 219683, 219790
Sorry, prediction pasa_asmbl_38225.p1 fails validation.
(CAT)	 AG	217900-218067	GT	AGG
(GAC)	 AG	218512-218700	GT	CGG
(GAG)	 AG	219683-219790	CG	GAC
-recovered pasa_asmbl_38225.p1, internal, 217900, 218067
-recovered pasa_asmbl_38225.p1, internal, 218512, 218700
Valid prediction for CodingQuarry_transcript_43642-T1
Valid prediction for snap_scaffold_28-snap.1115-T1
Valid prediction for snap_scaffold_28-snap.1102-T1
Valid prediction for snap_scaffold_28-snap.1111-T1
Couldn't classify 2287, 2497
Sorry, prediction pasa_asmbl_38230.p1 fails validation.
(TAC)	 AA	2287-2497	GT	AGG
(TGT)	 AG	3038-3187	GT	CGG
(GTG)	 AG	3631-3858	GT	TGG
(GTC)	 AG	3992-4098	GT	AGG
(GCA)	 AG	4773-4861	GT	AAG
(GCT)	 AG	5583-5694	GT	AGG
(GAG)	 AG	5900-6001	GC	GAG
-recovered pasa_asmbl_38230.p1, terminal, 5900, 6001
-recovered pasa_asmbl_38230.p1, internal, 3038, 3187
-recovered pasa_asmbl_38230.p1, internal, 3631, 3858
-recovered pasa_asmbl_38230.p1, internal, 3992, 4098
-recovered pasa_asmbl_38230.p1, internal, 4773, 4861
-recovered pasa_asmbl_38230.p1, internal, 5583, 5694
-recovered pasa_asmbl_38230.p1, internal, 5900, 6001
Couldn't classify 66681, 66750
Sorry, prediction CodingQuarry_transcript_43646-T1 fails validation.
(ATG)	 AC	65426-65661	GT	AGG
(GAA)	 AG	66181-66277	GT	AAG
(AAC)	 AG	66368-66484	GT	AGG
(GTC)	 AG	66681-66750	TA	AGT
(CAG)	 AG	66777-66850	GT	AGG
(TCT)	 AG	67066-67644	CA	GAC
-recovered CodingQuarry_transcript_43646-T1, initial, 65426, 65661
-recovered CodingQuarry_transcript_43646-T1, terminal, 67066, 67644
-recovered CodingQuarry_transcript_43646-T1, internal, 66181, 66277
-recovered CodingQuarry_transcript_43646-T1, internal, 66368, 66484
-recovered CodingQuarry_transcript_43646-T1, internal, 66777, 66850
Valid prediction for snap_scaffold_28-snap.1108-T1
Valid prediction for HiQ_model.g38917.t1
Valid prediction for Augustus_model.g38903.t1
Valid prediction for GlimmerHMM_glimmerT_58717-T1
Valid prediction for pasa_asmbl_38224.p1
Valid prediction for snap_scaffold_28-snap.1110-T1
Valid prediction for Augustus_model.g38896.t1
Valid prediction for Augustus_model.g38908.t1
Valid prediction for pasa_asmbl_38227.p2
Valid prediction for GlimmerHMM_glimmerT_58707-T1
Valid prediction for GlimmerHMM_glimmerT_58728-T1
Valid prediction for snap_scaffold_28-snap.1132-T1
Valid prediction for Augustus_model.g38892.t1
Valid prediction for GlimmerHMM_glimmerT_58737-T1
Valid prediction for snap_scaffold_28-snap.1124-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 28739, rend_intergenic: 18071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33775, rend_intergenic: 28964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70693, rend_intergenic: 63756  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88674, rend_intergenic: 85206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107351, rend_intergenic: 104942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123377, rend_intergenic: 118440  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148011, rend_intergenic: 146035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166873, rend_intergenic: 164864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175343, rend_intergenic: 168828  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190045, rend_intergenic: 187501  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199163, rend_intergenic: 196045  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207328, rend_intergenic: 203480  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223200, rend_intergenic: 208864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 245512
-exon list size: 439


building trellis

0.2    
0.5    
0.7    
0.9    
1.1    
1.4    
1.6    
1.8    
2.0    
2.3    
2.5    
2.7    
2.9    
3.2    
3.4    
3.6    
3.9    
4.1    
4.3    
4.5    
4.8    
5.0    
5.2    
5.4    
5.7    
5.9    
6.1    
6.3    
6.6    
6.8    
7.0    
7.3    
7.5    
7.7    
7.9    
8.2    
8.4    
8.6    
8.8    
9.1    
9.3    
9.5    
9.8    
10.0    
10.2    
10.4    
10.7    
10.9    
11.1    
11.3    
11.6    
11.8    
12.0    
12.2    
12.5    
12.7    
12.9    
13.2    
13.4    
13.6    
13.8    
14.1    
14.3    
14.5    
14.7    
15.0    
15.2    
15.4    
15.6    
15.9    
16.1    
16.3    
16.6    
16.8    
17.0    
17.2    
17.5    
17.7    
17.9    
18.1    
18.4    
18.6    
18.8    
19.0    
19.3    
19.5    
19.7    
20.0    
20.2    
20.4    
20.6    
20.9    
21.1    
21.3    
21.5    
21.8    
22.0    
22.2    
22.4    
22.7    
22.9    
23.1    
23.4    
23.6    
23.8    
24.0    
24.3    
24.5    
24.7    
24.9    
25.2    
25.4    
25.6    
25.9    
26.1    
26.3    
26.5    
26.8    
27.0    
27.2    
27.4    
27.7    
27.9    
28.1    
28.3    
28.6    
28.8    
29.0    
29.3    
29.5    
29.7    
29.9    
30.2    
30.4    
30.6    
30.8    
31.1    
31.3    
31.5    
31.7    
32.0    
32.2    
32.4    
32.7    
32.9    
33.1    
33.3    
33.6    
33.8    
34.0    
34.2    
34.5    
34.7    
34.9    
35.1    
35.4    
35.6    
35.8    
36.1    
36.3    
36.5    
36.7    
37.0    
37.2    
37.4    
37.6    
37.9    
38.1    
38.3    
38.5    
38.8    
39.0    
39.2    
39.5    
39.7    
39.9    
40.1    
40.4    
40.6    
40.8    
41.0    
41.3    
41.5    
41.7    
42.0    
42.2    
42.4    
42.6    
42.9    
43.1    
43.3    
43.5    
43.8    
44.0    
44.2    
44.4    
44.7    
44.9    
45.1    
45.4    
45.6    
45.8    
46.0    
46.3    
46.5    
46.7    
46.9    
47.2    
47.4    
47.6    
47.8    
48.1    
48.3    
48.5    
48.8    
49.0    
49.2    
49.4    
49.7    
49.9    
50.1    
50.3    
50.6    
50.8    
51.0    
51.2    
51.5    
51.7    
51.9    
52.2    
52.4    
52.6    
52.8    
53.1    
53.3    
53.5    
53.7    
54.0    
54.2    
54.4    
54.6    
54.9    
55.1    
55.3    
55.6    
55.8    
56.0    
56.2    
56.5    
56.7    
56.9    
57.1    
57.4    
57.6    
57.8    
58.0    
58.3    
58.5    
58.7    
59.0    
59.2    
59.4    
59.6    
59.9    
60.1    
60.3    
60.5    
60.8    
61.0    
61.2    
61.5    
61.7    
61.9    
62.1    
62.4    
62.6    
62.8    
63.0    
63.3    
63.5    
63.7    
63.9    
64.2    
64.4    
64.6    
64.9    
65.1    
65.3    
65.5    
65.8    
66.0    
66.2    
66.4    
66.7    
66.9    
67.1    
67.3    
67.6    
67.8    
68.0    
68.3    
68.5    
68.7    
68.9    
69.2    
69.4    
69.6    
69.8    
70.1    
70.3    
70.5    
70.7    
71.0    
71.2    
71.4    
71.7    
71.9    
72.1    
72.3    
72.6    
72.8    
73.0    
73.2    
73.5    
73.7    
73.9    
74.1    
74.4    
74.6    
74.8    
75.1    
75.3    
75.5    
75.7    
76.0    
76.2    
76.4    
76.6    
76.9    
77.1    
77.3    
77.6    
77.8    
78.0    
78.2    
78.5    
78.7    
78.9    
79.1    
79.4    
79.6    
79.8    
80.0    
80.3    
80.5    
80.7    
81.0    
81.2    
81.4    
81.6    
81.9    
82.1    
82.3    
82.5    
82.8    
83.0    
83.2    
83.4    
83.7    
83.9    
84.1    
84.4    
84.6    
84.8    
85.0    
85.3    
85.5    
85.7    
85.9    
86.2    
86.4    
86.6    
86.8    
87.1    
87.3    
87.5    
87.8    
88.0    
88.2    
88.4    
88.7    
88.9    
89.1    
89.3    
89.6    
89.8    
90.0    
90.2    
90.5    
90.7    
90.9    
91.2    
91.4    
91.6    
91.8    
92.1    
92.3    
92.5    
92.7    
93.0    
93.2    
93.4    
93.7    
93.9    
94.1    
94.3    
94.6    
94.8    
95.0    
95.2    
95.5    
95.7    
95.9    
96.1    
96.4    
96.6    
96.8    
97.1    
97.3    
97.5    
97.7    
98.0    
98.2    
98.4    
98.6    
98.9    
99.1    
99.3    
99.5    
99.8    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 28739, rend_intergenic: 18071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33775, rend_intergenic: 28964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70693, rend_intergenic: 63756  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88674, rend_intergenic: 85206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107351, rend_intergenic: 104942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123377, rend_intergenic: 118440  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148011, rend_intergenic: 146035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166873, rend_intergenic: 164864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175343, rend_intergenic: 168828  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190045, rend_intergenic: 187501  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199163, rend_intergenic: 196045  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207328, rend_intergenic: 203480  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223200, rend_intergenic: 208864  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support