-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_28/scaffold_28_3830053-4136864

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_58586-T1
Valid prediction for GlimmerHMM_glimmerT_58613-T1
Valid prediction for CodingQuarry_transcript_43621-T1
Valid prediction for CodingQuarry_transcript_43620-T1
Valid prediction for pasa_asmbl_37497.p1
Valid prediction for Augustus_model.g38827.t1
Valid prediction for snap_scaffold_28-snap.950-T1
Valid prediction for Augustus_model.g38826.t1
Valid prediction for HiQ_model.g38829.t1
Valid prediction for GlimmerHMM_glimmerT_58604-T1
Valid prediction for HiQ_model.g38807.t1
Valid prediction for pasa_asmbl_37503.p1
Valid prediction for pasa_asmbl_37514.p1
Valid prediction for GlimmerHMM_glimmerT_58594-T1
Valid prediction for GlimmerHMM_glimmerT_58598-T1
Valid prediction for snap_scaffold_28-snap.981-T1
Valid prediction for GlimmerHMM_glimmerT_58597-T1
Couldn't classify 129773, 129791
Couldn't classify 133773, 133888
Sorry, prediction pasa_asmbl_37507.p1 fails validation.
(GAC)	 AG	129773-129791	GT	CGG
(GAC)	 AG	130468-130568	GT	AGG
(AAC)	 AG	131583-131730	GT	AGG
(GTG)	 AG	131917-132020	GT	AGG
(CCG)	 AG	132702-132792	GT	CGG
(GTG)	 AG	133141-133254	GT	AGG
(ATT)	 AG	133773-133888	CT	GCC
-recovered pasa_asmbl_37507.p1, internal, 129773, 129791
-recovered pasa_asmbl_37507.p1, internal, 130468, 130568
-recovered pasa_asmbl_37507.p1, internal, 131583, 131730
-recovered pasa_asmbl_37507.p1, internal, 131917, 132020
-recovered pasa_asmbl_37507.p1, internal, 132702, 132792
-recovered pasa_asmbl_37507.p1, internal, 133141, 133254
Valid prediction for CodingQuarry_transcript_43624-T1
Valid prediction for pasa_asmbl_37494.p1
Valid prediction for snap_scaffold_28-snap.951-T1
Valid prediction for Augustus_model.g38806.t1
Valid prediction for HiQ_model.g38812.t1
Valid prediction for snap_scaffold_28-snap.985-T1
Couldn't classify 289880, 290262
Sorry, prediction pasa_asmbl_37513.p1 fails validation.
(TGC)	 CC	289880-290262	GT	AAG
(CCC)	 AG	290555-290980	GT	GGG
(GTC)	 AG	291321-291469	GT	CAG
(GCG)	 AG	292531-292741	GT	AAG
(ACC)	 AG	293161-293251	GT	GGG
(CAG)	 AG	293448-293613	GT	AGG
(ATG)	 AG	294893-295191	GT	AGG
(ATT)	 AG	295520-295667	GT	TGG
(GTA)	 AG	295974-296071	GT	AAG
(GAG)	 AG	296449-297750	GG	AGG
add_exon() Sorry, pasa_asmbl_37513.p1 294893-295191-initial-1 is invalid.
-recovered pasa_asmbl_37513.p1, initial, 294893, 295191
-recovered pasa_asmbl_37513.p1, terminal, 296449, 297750
-recovered pasa_asmbl_37513.p1, internal, 290555, 290980
-recovered pasa_asmbl_37513.p1, internal, 291321, 291469
-recovered pasa_asmbl_37513.p1, internal, 292531, 292741
-recovered pasa_asmbl_37513.p1, internal, 293161, 293251
-recovered pasa_asmbl_37513.p1, internal, 293448, 293613
-recovered pasa_asmbl_37513.p1, internal, 294893, 295191
-recovered pasa_asmbl_37513.p1, internal, 295520, 295667
-recovered pasa_asmbl_37513.p1, internal, 295974, 296071
Valid prediction for snap_scaffold_28-snap.961-T1
Valid prediction for snap_scaffold_28-snap.979-T1
Valid prediction for snap_scaffold_28-snap.987-T1
Valid prediction for HiQ_model.g38815.t1
Valid prediction for snap_scaffold_28-snap.976-T1
Valid prediction for snap_scaffold_28-snap.974-T1
Valid prediction for CodingQuarry_transcript_43616-T1
Valid prediction for GlimmerHMM_glimmerT_58593-T1
Valid prediction for pasa_asmbl_37501.p1
Valid prediction for snap_scaffold_28-snap.972-T1
Couldn't classify 286789, 286939
Couldn't classify 287410, 287555
Sorry, prediction pasa_asmbl_37512.p1 fails validation.
(CTG)	 AT	286789-286939	GT	AGG
(GCG)	 AG	287410-287555	GC	GGG
-recovered pasa_asmbl_37512.p1, internal, 287410, 287555
Valid prediction for snap_scaffold_28-snap.958-T1
Valid prediction for GlimmerHMM_glimmerT_58588-T1
Valid prediction for GlimmerHMM_glimmerT_58616-T1
Valid prediction for GlimmerHMM_glimmerT_58615-T1
Couldn't classify 128281, 128363
Sorry, prediction pasa_asmbl_37505.p1 fails validation.
(ATG)	 CC	126910-127018	GT	AGG
(ATC)	 AG	127106-127209	GT	AGG
(CAC)	 AG	127467-127619	GT	AGG
(ACA)	 AG	127764-127908	GT	AGG
(GCC)	 AG	128281-128363	AA	GCA
-recovered pasa_asmbl_37505.p1, initial, 126910, 127018
-recovered pasa_asmbl_37505.p1, internal, 127106, 127209
-recovered pasa_asmbl_37505.p1, internal, 127467, 127619
-recovered pasa_asmbl_37505.p1, internal, 127764, 127908
Couldn't classify 280715, 280730
Couldn't classify 283187, 283301
Sorry, prediction pasa_asmbl_37833.p1 fails validation.
(TGC)	 CC	280715-280730	GT	AGG
(GCT)	 AG	280863-281096	GT	AGG
(GGG)	 AG	281441-281551	GT	TGG
(GCA)	 AG	282852-283044	GT	GGG
(GTA)	 AG	283187-283301	TA	GAT
add_exon() Sorry, pasa_asmbl_37833.p1 280863-281096-terminal-1 is invalid.
-recovered pasa_asmbl_37833.p1, terminal, 280863, 281096
-recovered pasa_asmbl_37833.p1, internal, 280863, 281096
-recovered pasa_asmbl_37833.p1, internal, 281441, 281551
-recovered pasa_asmbl_37833.p1, internal, 282852, 283044
Couldn't classify 134868, 134993
Couldn't classify 136239, 136373
Sorry, prediction pasa_asmbl_37508.p1 fails validation.
(CTC)	 AG	134868-134993	GT	TGG
(AAG)	 AG	135122-135304	GT	AGG
(AGT)	 AG	135519-135629	GT	AGG
(CTG)	 AG	135731-135853	GT	AGG
(GAG)	 AG	136239-136373	CA	AGC
-recovered pasa_asmbl_37508.p1, internal, 134868, 134993
-recovered pasa_asmbl_37508.p1, internal, 135122, 135304
-recovered pasa_asmbl_37508.p1, internal, 135519, 135629
-recovered pasa_asmbl_37508.p1, internal, 135731, 135853
Valid prediction for GlimmerHMM_glimmerT_58602-T1
Valid prediction for snap_scaffold_28-snap.967-T1
Valid prediction for snap_scaffold_28-snap.983-T1
Valid prediction for GlimmerHMM_glimmerT_58587-T1
Valid prediction for Augustus_model.g38818.t1
Valid prediction for snap_scaffold_28-snap.937-T1
Valid prediction for snap_scaffold_28-snap.975-T1
Valid prediction for snap_scaffold_28-snap.957-T1
Valid prediction for snap_scaffold_28-snap.965-T1
Valid prediction for GlimmerHMM_glimmerT_58614-T1
Valid prediction for snap_scaffold_28-snap.946-T1
Valid prediction for snap_scaffold_28-snap.938-T1
Valid prediction for Augustus_model.g38828.t1
Valid prediction for CodingQuarry_transcript_43622-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_43619-T1
Valid prediction for Augustus_model.g38821.t1
Valid prediction for GlimmerHMM_glimmerT_58607-T1
Valid prediction for GlimmerHMM_glimmerT_58610-T1
Valid prediction for Augustus_model.g38823.t1
Couldn't classify 163182, 163226
Sorry, prediction pasa_asmbl_38193.p1 fails validation.
(TTC)	 CC	163182-163226	GT	AGG
(ACA)	 AG	163388-163471	GT	AGG
(GAT)	 AG	164024-164269	GT	AGG
(TTA)	 AG	164496-164634	GT	TGG
(GCA)	 AG	164803-164933	GT	AGG
(GTG)	 AG	165271-165597	AC	GAA
-recovered pasa_asmbl_38193.p1, terminal, 165271, 165597
-recovered pasa_asmbl_38193.p1, internal, 163388, 163471
-recovered pasa_asmbl_38193.p1, internal, 164024, 164269
-recovered pasa_asmbl_38193.p1, internal, 164496, 164634
-recovered pasa_asmbl_38193.p1, internal, 164803, 164933
Valid prediction for snap_scaffold_28-snap.949-T1
Valid prediction for snap_scaffold_28-snap.944-T1
Valid prediction for Augustus_model.g38819.t1
Valid prediction for snap_scaffold_28-snap.980-T1
Valid prediction for snap_scaffold_28-snap.969-T1
Valid prediction for Augustus_model.g38810.t1
Valid prediction for HiQ_model.g38809.t1
Valid prediction for GlimmerHMM_glimmerT_58609-T1
Valid prediction for snap_scaffold_28-snap.956-T1
Couldn't classify 163003, 163079
Sorry, prediction pasa_asmbl_38194.p1 fails validation.
(ATG)	 CT	162061-162186	GT	TGG
(GCT)	 AG	162593-162776	GT	GGG
(CCG)	 AG	163003-163079	TT	AGT
-recovered pasa_asmbl_38194.p1, initial, 162061, 162186
-recovered pasa_asmbl_38194.p1, internal, 162593, 162776
Couldn't classify 262898, 263142
Sorry, prediction pasa_asmbl_38185.p1 fails validation.
(AAC)	 CT	262898-263142	GT	GTG
(CTA)	 AG	264006-264195	GT	AGG
(ATC)	 AG	265116-265232	GT	AAG
(GGT)	 AG	265414-265528	GT	AGG
(GTA)	 AG	265662-265793	GT	AGG
(CGC)	 AG	266854-266963	GT	AGG
(CCT)	 AG	267086-267202	CC	AAC
add_exon() Sorry, pasa_asmbl_38185.p1 265414-265528-terminal-3 is invalid.
-recovered pasa_asmbl_38185.p1, terminal, 265414, 265528
-recovered pasa_asmbl_38185.p1, terminal, 267086, 267202
-recovered pasa_asmbl_38185.p1, internal, 264006, 264195
-recovered pasa_asmbl_38185.p1, internal, 265116, 265232
-recovered pasa_asmbl_38185.p1, internal, 265414, 265528
-recovered pasa_asmbl_38185.p1, internal, 265662, 265793
-recovered pasa_asmbl_38185.p1, internal, 266854, 266963
Valid prediction for snap_scaffold_28-snap.942-T1
Valid prediction for GlimmerHMM_glimmerT_58592-T1
Valid prediction for snap_scaffold_28-snap.963-T1
Valid prediction for Augustus_model.g38820.t1
Valid prediction for Augustus_model.g38817.t1
Valid prediction for snap_scaffold_28-snap.964-T1
Valid prediction for Augustus_model.g38822.t1
Valid prediction for snap_scaffold_28-snap.955-T1
Valid prediction for pasa_asmbl_38189.p1
Valid prediction for Augustus_model.g38816.t1
Couldn't classify 283194, 283365
Sorry, prediction pasa_asmbl_38180.p1 fails validation.
(CCC)	 AT	283194-283365	GT	AAG
(CAA)	 AG	283471-283588	GT	AAG
(AAC)	 AG	283975-284076	GT	AGG
(TGA)	 AG	284236-284359	GT	AGG
(GTT)	 AG	284681-284745	GT	GGG
(TGA)	 AG	285121-285186	GT	AGG
(TGC)	 AG	285266-285335	GT	AGG
(CTT)	 AG	285463-285555	GT	AGG
(GCG)	 AG	285746-285829	GT	TGG
(GAC)	 AG	286082-286249	GT	AGG
(AGC)	 AG	286547-286644	GT	AGG
(ATG)	 AG	288258-288377	GT	AGG
(GGC)	 AG	288533-288647	GT	AGG
(AAT)	 AG	289079-289117	AA	GAA
add_exon() Sorry, pasa_asmbl_38180.p1 288258-288377-initial-1 is invalid.
-recovered pasa_asmbl_38180.p1, initial, 288258, 288377
-recovered pasa_asmbl_38180.p1, terminal, 289079, 289117
-recovered pasa_asmbl_38180.p1, internal, 283471, 283588
-recovered pasa_asmbl_38180.p1, internal, 283975, 284076
-recovered pasa_asmbl_38180.p1, internal, 284236, 284359
-recovered pasa_asmbl_38180.p1, internal, 284681, 284745
-recovered pasa_asmbl_38180.p1, internal, 285121, 285186
-recovered pasa_asmbl_38180.p1, internal, 285266, 285335
-recovered pasa_asmbl_38180.p1, internal, 285463, 285555
-recovered pasa_asmbl_38180.p1, internal, 285746, 285829
-recovered pasa_asmbl_38180.p1, internal, 286082, 286249
-recovered pasa_asmbl_38180.p1, internal, 286547, 286644
-recovered pasa_asmbl_38180.p1, internal, 288258, 288377
-recovered pasa_asmbl_38180.p1, internal, 288533, 288647
Couldn't classify 160394, 160547
Couldn't classify 161032, 161048
Sorry, prediction pasa_asmbl_38195.p1 fails validation.
(GTG)	 CG	160394-160547	GT	AGG
(GTG)	 AG	160723-160911	GT	CGG
(TGC)	 AG	161032-161048	AA	GGA
-recovered pasa_asmbl_38195.p1, internal, 160723, 160911
Valid prediction for snap_scaffold_28-snap.948-T1
Valid prediction for GlimmerHMM_glimmerT_58600-T1
Valid prediction for Augustus_model.g38813.t1
Valid prediction for Augustus_model.g38814.t1
Valid prediction for snap_scaffold_28-snap.940-T1
Valid prediction for snap_scaffold_28-snap.945-T1
Valid prediction for Augustus_model.g38824.t1
Valid prediction for snap_scaffold_28-snap.941-T1
Valid prediction for Augustus_model.g38825.t1
Valid prediction for snap_scaffold_28-snap.954-T1
Valid prediction for snap_scaffold_28-snap.968-T1
Valid prediction for GlimmerHMM_glimmerT_58589-T1
Valid prediction for GlimmerHMM_glimmerT_58611-T1
Valid prediction for pasa_asmbl_38184.p1
Valid prediction for GlimmerHMM_glimmerT_58590-T1
Valid prediction for snap_scaffold_28-snap.984-T1
Valid prediction for CodingQuarry_transcript_43617-T1
Valid prediction for GlimmerHMM_glimmerT_58599-T1
Valid prediction for HiQ_model.g38808.t1
Valid prediction for GlimmerHMM_glimmerT_58591-T1
Valid prediction for snap_scaffold_28-snap.960-T1
Valid prediction for snap_scaffold_28-snap.939-T1
Valid prediction for snap_scaffold_28-snap.971-T1
Valid prediction for snap_scaffold_28-snap.973-T1
Valid prediction for snap_scaffold_28-snap.977-T1
Valid prediction for snap_scaffold_28-snap.943-T1
Valid prediction for GlimmerHMM_glimmerT_58605-T1
Valid prediction for snap_scaffold_28-snap.962-T1
Valid prediction for snap_scaffold_28-snap.966-T1
Valid prediction for snap_scaffold_28-snap.959-T1
Valid prediction for snap_scaffold_28-snap.970-T1
Valid prediction for CodingQuarry_transcript_43618-T1
Valid prediction for GlimmerHMM_glimmerT_58608-T1
Valid prediction for snap_scaffold_28-snap.947-T1
Valid prediction for GlimmerHMM_glimmerT_58612-T1
Valid prediction for snap_scaffold_28-snap.952-T1
Valid prediction for GlimmerHMM_glimmerT_58595-T1
Valid prediction for GlimmerHMM_glimmerT_58603-T1
Valid prediction for Augustus_model.g38811.t1
Valid prediction for snap_scaffold_28-snap.982-T1
Valid prediction for GlimmerHMM_glimmerT_58601-T1
Valid prediction for snap_scaffold_28-snap.986-T1
Valid prediction for GlimmerHMM_glimmerT_58596-T1
Valid prediction for GlimmerHMM_glimmerT_58606-T1
Valid prediction for snap_scaffold_28-snap.978-T1
Valid prediction for snap_scaffold_28-snap.953-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 137736, rend_intergenic: 134823  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152529, rend_intergenic: 150465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186480, rend_intergenic: 181894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198110, rend_intergenic: 190126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234602, rend_intergenic: 232529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237546, rend_intergenic: 235964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 277224, rend_intergenic: 273358  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 278930, rend_intergenic: 278726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 287636, rend_intergenic: 284347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 291908, rend_intergenic: 287705  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 297750, rend_intergenic: 292455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 306812
-exon list size: 609


building trellis

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48.3    
48.4    
48.6    
48.8    
48.9    
49.1    
49.3    
49.4    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.6    
50.7    
50.9    
51.1    
51.2    
51.4    
51.6    
51.7    
51.9    
52.0    
52.2    
52.4    
52.5    
52.7    
52.9    
53.0    
53.2    
53.4    
53.5    
53.7    
53.8    
54.0    
54.2    
54.3    
54.5    
54.7    
54.8    
55.0    
55.2    
55.3    
55.5    
55.6    
55.8    
56.0    
56.1    
56.3    
56.5    
56.6    
56.8    
57.0    
57.1    
57.3    
57.4    
57.6    
57.8    
57.9    
58.1    
58.3    
58.4    
58.6    
58.8    
58.9    
59.1    
59.2    
59.4    
59.6    
59.7    
59.9    
60.1    
60.2    
60.4    
60.6    
60.7    
60.9    
61.0    
61.2    
61.4    
61.5    
61.7    
61.9    
62.0    
62.2    
62.4    
62.5    
62.7    
62.8    
63.0    
63.2    
63.3    
63.5    
63.7    
63.8    
64.0    
64.2    
64.3    
64.5    
64.6    
64.8    
65.0    
65.1    
65.3    
65.5    
65.6    
65.8    
66.0    
66.1    
66.3    
66.4    
66.6    
66.8    
66.9    
67.1    
67.3    
67.4    
67.6    
67.8    
67.9    
68.1    
68.2    
68.4    
68.6    
68.7    
68.9    
69.1    
69.2    
69.4    
69.6    
69.7    
69.9    
70.0    
70.2    
70.4    
70.5    
70.7    
70.9    
71.0    
71.2    
71.4    
71.5    
71.7    
71.8    
72.0    
72.2    
72.3    
72.5    
72.7    
72.8    
73.0    
73.2    
73.3    
73.5    
73.6    
73.8    
74.0    
74.1    
74.3    
74.5    
74.6    
74.8    
75.0    
75.1    
75.3    
75.5    
75.6    
75.8    
75.9    
76.1    
76.3    
76.4    
76.6    
76.8    
76.9    
77.1    
77.3    
77.4    
77.6    
77.7    
77.9    
78.1    
78.2    
78.4    
78.6    
78.7    
78.9    
79.1    
79.2    
79.4    
79.5    
79.7    
79.9    
80.0    
80.2    
80.4    
80.5    
80.7    
80.9    
81.0    
81.2    
81.3    
81.5    
81.7    
81.8    
82.0    
82.2    
82.3    
82.5    
82.7    
82.8    
83.0    
83.1    
83.3    
83.5    
83.6    
83.8    
84.0    
84.1    
84.3    
84.5    
84.6    
84.8    
84.9    
85.1    
85.3    
85.4    
85.6    
85.8    
85.9    
86.1    
86.3    
86.4    
86.6    
86.7    
86.9    
87.1    
87.2    
87.4    
87.6    
87.7    
87.9    
88.1    
88.2    
88.4    
88.5    
88.7    
88.9    
89.0    
89.2    
89.4    
89.5    
89.7    
89.9    
90.0    
90.2    
90.3    
90.5    
90.7    
90.8    
91.0    
91.2    
91.3    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.5    
92.6    
92.8    
93.0    
93.1    
93.3    
93.5    
93.6    
93.8    
93.9    
94.1    
94.3    
94.4    
94.6    
94.8    
94.9    
95.1    
95.3    
95.4    
95.6    
95.7    
95.9    
96.1    
96.2    
96.4    
96.6    
96.7    
96.9    
97.1    
97.2    
97.4    
97.5    
97.7    
97.9    
98.0    
98.2    
98.4    
98.5    
98.7    
98.9    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 38 predictions from path traversal
Error with prediction: snap lend_intergenic: 137736, rend_intergenic: 134823  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 152529, rend_intergenic: 150465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186480, rend_intergenic: 181894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198110, rend_intergenic: 190126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234602, rend_intergenic: 232529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237546, rend_intergenic: 235964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 277224, rend_intergenic: 273358  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 278930, rend_intergenic: 278726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 287636, rend_intergenic: 284347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 291908, rend_intergenic: 287705  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 297750, rend_intergenic: 292455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 31 predictions persist after filtering for low support