-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_27/scaffold_27_7402620-7591568

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_57639-T1
Valid prediction for CodingQuarry_transcript_41950-T1
Valid prediction for snap_scaffold_27-snap.1751-T1
Valid prediction for Augustus_model.g38204.t1
Valid prediction for snap_scaffold_27-snap.1786-T1
Valid prediction for GlimmerHMM_glimmerT_57619-T1
Valid prediction for pasa_asmbl_36449.p1
Valid prediction for snap_scaffold_27-snap.1776-T1
Valid prediction for HiQ_model.g38183.t1
Valid prediction for Augustus_model.g38192.t1
Valid prediction for Augustus_model.g38199.t1
Valid prediction for pasa_asmbl_36452.p1
Valid prediction for GlimmerHMM_glimmerT_57617-T1
Valid prediction for snap_scaffold_27-snap.1748-T1
Valid prediction for CodingQuarry_transcript_41953-T1
Valid prediction for snap_scaffold_27-snap.1780-T1
Valid prediction for Augustus_model.g38194.t1
Valid prediction for Augustus_model.g38195.t1
Valid prediction for snap_scaffold_27-snap.1752-T1
Valid prediction for snap_scaffold_27-snap.1775-T1
Valid prediction for pasa_asmbl_36465.p1
Valid prediction for GlimmerHMM_glimmerT_57631-T1
Valid prediction for GlimmerHMM_glimmerT_57612-T1
Valid prediction for snap_scaffold_27-snap.1762-T1
Valid prediction for GlimmerHMM_glimmerT_57636-T1
Valid prediction for GlimmerHMM_glimmerT_57615-T1
Valid prediction for snap_scaffold_27-snap.1771-T1
Sorry, intron length (3) is less than minimum required (10)
Couldn't classify 41564, 41881
Sorry, prediction pasa_asmbl_36451.p1 fails validation.
(GTG)	 AG	41564-41881	GT	AGG
(GTC)	 AG	42280-42606	GA	GAG
-recovered pasa_asmbl_36451.p1, terminal, 42280, 42606
-recovered pasa_asmbl_36451.p1, internal, 41564, 41881
Valid prediction for GlimmerHMM_glimmerT_57616-T1
Couldn't classify 126559, 126677
Couldn't classify 126899, 126980
Sorry, prediction CodingQuarry_transcript_41954-T1 fails validation.
(ATG)	 TT	126559-126677	CA	TGC
(CAC)	 AC	126899-126980	GA	GAG
Valid prediction for CodingQuarry_transcript_41945-T1
Valid prediction for GlimmerHMM_glimmerT_57623-T1
Valid prediction for HiQ_model.g38181.t1
Valid prediction for Augustus_model.g38201.t1
Valid prediction for Augustus_model.g38180.t1
Valid prediction for CodingQuarry_transcript_41944-T1
Valid prediction for GlimmerHMM_glimmerT_57632-T1
Couldn't classify 37342, 37421
Couldn't classify 40155, 40206
Sorry, prediction pasa_asmbl_36450.p1 fails validation.
(GTA)	 CC	37342-37421	GT	AGG
(AAT)	 AG	38329-38535	GT	AGG
(GAC)	 AG	39045-39183	GT	AGG
(TTC)	 AG	39832-39974	GT	GGG
(GCA)	 AG	40155-40206	GG	AAG
-recovered pasa_asmbl_36450.p1, internal, 38329, 38535
-recovered pasa_asmbl_36450.p1, internal, 39045, 39183
-recovered pasa_asmbl_36450.p1, internal, 39832, 39974
Valid prediction for snap_scaffold_27-snap.1782-T1
Valid prediction for pasa_asmbl_36448.p1
Valid prediction for snap_scaffold_27-snap.1759-T1
Valid prediction for snap_scaffold_27-snap.1754-T1
Valid prediction for CodingQuarry_transcript_41942-T1
Valid prediction for HiQ_model.g38185.t1
Valid prediction for Augustus_model.g38188.t1
Valid prediction for snap_scaffold_27-snap.1766-T1
Couldn't classify 85682, 85732
Sorry, prediction pasa_asmbl_36459.p1 fails validation.
(AGA)	 GA	85682-85732	GT	AGG
(GTT)	 AG	86086-86167	GT	TAG
(GAT)	 AG	86271-86407	GT	ACG
(TTT)	 AG	86533-86667	GT	AGG
(GTG)	 AG	86927-87008	GT	AGG
(GAA)	 AG	87492-87602	GT	TGG
(CCA)	 AG	88212-88369	CC	GAC
add_exon() Sorry, pasa_asmbl_36459.p1 86927-87008-terminal-3 is invalid.
-recovered pasa_asmbl_36459.p1, terminal, 86927, 87008
-recovered pasa_asmbl_36459.p1, terminal, 88212, 88369
-recovered pasa_asmbl_36459.p1, internal, 86086, 86167
-recovered pasa_asmbl_36459.p1, internal, 86271, 86407
-recovered pasa_asmbl_36459.p1, internal, 86533, 86667
-recovered pasa_asmbl_36459.p1, internal, 86927, 87008
-recovered pasa_asmbl_36459.p1, internal, 87492, 87602
Valid prediction for GlimmerHMM_glimmerT_57620-T1
Valid prediction for GlimmerHMM_glimmerT_57614-T1
Valid prediction for snap_scaffold_27-snap.1755-T1
Valid prediction for snap_scaffold_27-snap.1760-T1
Valid prediction for GlimmerHMM_glimmerT_57626-T1
Valid prediction for snap_scaffold_27-snap.1778-T1
Couldn't classify 50702, 51853
Sorry, prediction pasa_asmbl_36454.p1 fails validation.
(CTG)	 TC	50702-51853	AG	AAA
Valid prediction for snap_scaffold_27-snap.1746-T1
Couldn't classify 138429, 138458
Couldn't classify 143958, 144072
Sorry, prediction pasa_asmbl_36469.p1 fails validation.
(CAT)	 AG	138429-138458	GT	AGG
(ACG)	 AG	138654-138734	GT	AGG
(ACT)	 AG	139281-139373	GT	GGG
(CGT)	 AG	140041-140154	GT	AGG
(GCG)	 AG	140354-140506	GT	AGG
(ATG)	 AG	141286-141417	GT	GGG
(TCC)	 AG	142081-142209	GT	AGG
(GAG)	 AG	143286-143356	GT	AGG
(GTA)	 AG	143958-144072	GT	AGG
-recovered pasa_asmbl_36469.p1, initial, 141286, 141417
-recovered pasa_asmbl_36469.p1, internal, 138429, 138458
-recovered pasa_asmbl_36469.p1, internal, 138654, 138734
-recovered pasa_asmbl_36469.p1, internal, 139281, 139373
-recovered pasa_asmbl_36469.p1, internal, 140041, 140154
-recovered pasa_asmbl_36469.p1, internal, 140354, 140506
-recovered pasa_asmbl_36469.p1, internal, 141286, 141417
-recovered pasa_asmbl_36469.p1, internal, 142081, 142209
-recovered pasa_asmbl_36469.p1, internal, 143286, 143356
-recovered pasa_asmbl_36469.p1, internal, 143958, 144072
Valid prediction for snap_scaffold_27-snap.1749-T1
Valid prediction for HiQ_model.g38187.t1
Valid prediction for pasa_asmbl_36455.p1
Valid prediction for snap_scaffold_27-snap.1772-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for Augustus_model.g38182.t1
Valid prediction for GlimmerHMM_glimmerT_57624-T1
Valid prediction for HiQ_model.g38198.t1
Valid prediction for Augustus_model.g38184.t1
Valid prediction for snap_scaffold_27-snap.1740-T1
Valid prediction for GlimmerHMM_glimmerT_57634-T1
Valid prediction for GlimmerHMM_glimmerT_57630-T1
Valid prediction for HiQ_model.g38191.t1
Valid prediction for Augustus_model.g38200.t1
Valid prediction for snap_scaffold_27-snap.1763-T1
Valid prediction for HiQ_model.g38174.t1
Valid prediction for snap_scaffold_27-snap.1757-T1
Valid prediction for CodingQuarry_transcript_41946-T1
Valid prediction for snap_scaffold_27-snap.1744-T1
Valid prediction for snap_scaffold_27-snap.1768-T1
Valid prediction for GlimmerHMM_glimmerT_57641-T1
Valid prediction for GlimmerHMM_glimmerT_57613-T1
Valid prediction for snap_scaffold_27-snap.1784-T1
Valid prediction for GlimmerHMM_glimmerT_57606-T1
Valid prediction for snap_scaffold_27-snap.1765-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_57637-T1
Valid prediction for HiQ_model.g38175.t1
Valid prediction for snap_scaffold_27-snap.1761-T1
Valid prediction for snap_scaffold_27-snap.1767-T1
Valid prediction for GlimmerHMM_glimmerT_57633-T1
Valid prediction for CodingQuarry_transcript_41947-T1
Valid prediction for GlimmerHMM_glimmerT_57638-T1
Valid prediction for Augustus_model.g38197.t1
Valid prediction for GlimmerHMM_glimmerT_57635-T1
Valid prediction for snap_scaffold_27-snap.1785-T1
Valid prediction for snap_scaffold_27-snap.1779-T1
Valid prediction for Augustus_model.g38203.t1
Valid prediction for Augustus_model.g38193.t1
Valid prediction for Augustus_model.g38178.t1
Valid prediction for GlimmerHMM_glimmerT_57622-T1
Valid prediction for snap_scaffold_27-snap.1741-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_57625-T1
Valid prediction for CodingQuarry_transcript_41948-T1
Couldn't classify 169788, 169868
Couldn't classify 170653, 170975
Sorry, prediction pasa_asmbl_37110.p1 fails validation.
(CAA)	 AC	169788-169868	GT	GGG
(GTG)	 AG	170045-170249	GT	GGG
(GCT)	 AG	170653-170975	GC	AGG
-recovered pasa_asmbl_37110.p1, internal, 170045, 170249
-recovered pasa_asmbl_37110.p1, internal, 170653, 170975
Valid prediction for HiQ_model.g38176.t1
Valid prediction for snap_scaffold_27-snap.1783-T1
Valid prediction for snap_scaffold_27-snap.1764-T1
Valid prediction for snap_scaffold_27-snap.1770-T1
Valid prediction for snap_scaffold_27-snap.1781-T1
Valid prediction for GlimmerHMM_glimmerT_57610-T1
Valid prediction for GlimmerHMM_glimmerT_57628-T1
Valid prediction for Augustus_model.g38186.t1
Valid prediction for snap_scaffold_27-snap.1750-T1
Valid prediction for GlimmerHMM_glimmerT_57629-T1
Valid prediction for snap_scaffold_27-snap.1756-T1
Valid prediction for GlimmerHMM_glimmerT_57609-T1
Valid prediction for snap_scaffold_27-snap.1747-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for HiQ_model.g38190.t1
Valid prediction for snap_scaffold_27-snap.1742-T1
Valid prediction for Augustus_model.g38179.t1
Valid prediction for GlimmerHMM_glimmerT_57611-T1
Valid prediction for GlimmerHMM_glimmerT_57608-T1
Valid prediction for CodingQuarry_transcript_41943-T1
Valid prediction for GlimmerHMM_glimmerT_57640-T1
Valid prediction for Augustus_model.g38177.t1
Valid prediction for snap_scaffold_27-snap.1773-T1
Valid prediction for snap_scaffold_27-snap.1777-T1
Couldn't classify 128086, 128311
Sorry, prediction pasa_asmbl_37113.p1 fails validation.
(GCC)	 GT	128086-128311	GT	AGG
(ACG)	 AG	128565-128669	GT	AGG
(AGA)	 AG	129102-129166	CC	GAC
-recovered pasa_asmbl_37113.p1, terminal, 129102, 129166
-recovered pasa_asmbl_37113.p1, internal, 128565, 128669
Valid prediction for HiQ_model.g38189.t1
Valid prediction for snap_scaffold_27-snap.1753-T1
Valid prediction for snap_scaffold_27-snap.1769-T1
Valid prediction for GlimmerHMM_glimmerT_57627-T1
Valid prediction for CodingQuarry_transcript_41949-T1
Couldn't classify 77450, 77496
Sorry, prediction pasa_asmbl_37118.p1 fails validation.
(CTT)	 AT	77450-77496	GT	AAG
(TCC)	 AG	77930-78045	GT	CGG
(GAG)	 AG	78151-78202	GT	CAG
(ATA)	 AG	78330-78459	GT	AGG
(ATT)	 AG	78869-79055	GT	AGG
(ATA)	 AG	79155-79738	AC	GAA
-recovered pasa_asmbl_37118.p1, terminal, 79155, 79738
-recovered pasa_asmbl_37118.p1, internal, 77930, 78045
-recovered pasa_asmbl_37118.p1, internal, 78151, 78202
-recovered pasa_asmbl_37118.p1, internal, 78330, 78459
-recovered pasa_asmbl_37118.p1, internal, 78869, 79055
Valid prediction for GlimmerHMM_glimmerT_57618-T1
Valid prediction for snap_scaffold_27-snap.1743-T1
Valid prediction for GlimmerHMM_glimmerT_57621-T1
Valid prediction for pasa_asmbl_37106.p1
Valid prediction for GlimmerHMM_glimmerT_57607-T1
Valid prediction for pasa_asmbl_37116.p1
Valid prediction for snap_scaffold_27-snap.1758-T1
Valid prediction for snap_scaffold_27-snap.1774-T1
Couldn't classify 178092, 178149
Sorry, prediction pasa_asmbl_37108.p1 fails validation.
(GAT)	 GA	178092-178149	GT	AGG
(GCT)	 AG	178691-179004	GA	GAG
-recovered pasa_asmbl_37108.p1, terminal, 178691, 179004
Valid prediction for snap_scaffold_27-snap.1745-T1
Valid prediction for HiQ_model.g38196.t1
Valid prediction for Augustus_model.g38202.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16369, rend_intergenic: 13197  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23631, rend_intergenic: 19065  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31534, rend_intergenic: 24870  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42203, rend_intergenic: 38330  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47274, rend_intergenic: 46162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56013, rend_intergenic: 53267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61416, rend_intergenic: 59935  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77385, rend_intergenic: 69555  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85056, rend_intergenic: 78990  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88369, rend_intergenic: 87424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106740, rend_intergenic: 91764  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117531, rend_intergenic: 115967  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123539, rend_intergenic: 121127  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139942, rend_intergenic: 129353  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145487, rend_intergenic: 139965  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149212, rend_intergenic: 147181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157567, rend_intergenic: 149561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159135, rend_intergenic: 158639  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163904, rend_intergenic: 159982  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166992, rend_intergenic: 166018  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176976, rend_intergenic: 167282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183823, rend_intergenic: 177599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 188949
-exon list size: 493


building trellis

0.2    
0.4    
0.6    
0.8    
1.0    
1.2    
1.4    
1.6    
1.8    
2.0    
2.2    
2.4    
2.6    
2.8    
3.0    
3.2    
3.4    
3.6    
3.8    
4.0    
4.2    
4.4    
4.6    
4.8    
5.1    
5.3    
5.5    
5.7    
5.9    
6.1    
6.3    
6.5    
6.7    
6.9    
7.1    
7.3    
7.5    
7.7    
7.9    
8.1    
8.3    
8.5    
8.7    
8.9    
9.1    
9.3    
9.5    
9.7    
9.9    
10.1    
10.3    
10.5    
10.7    
10.9    
11.1    
11.3    
11.5    
11.7    
11.9    
12.1    
12.3    
12.5    
12.7    
12.9    
13.1    
13.3    
13.5    
13.7    
13.9    
14.1    
14.3    
14.5    
14.7    
14.9    
15.2    
15.4    
15.6    
15.8    
16.0    
16.2    
16.4    
16.6    
16.8    
17.0    
17.2    
17.4    
17.6    
17.8    
18.0    
18.2    
18.4    
18.6    
18.8    
19.0    
19.2    
19.4    
19.6    
19.8    
20.0    
20.2    
20.4    
20.6    
20.8    
21.0    
21.2    
21.4    
21.6    
21.8    
22.0    
22.2    
22.4    
22.6    
22.8    
23.0    
23.2    
23.4    
23.6    
23.8    
24.0    
24.2    
24.4    
24.6    
24.8    
25.1    
25.3    
25.5    
25.7    
25.9    
26.1    
26.3    
26.5    
26.7    
26.9    
27.1    
27.3    
27.5    
27.7    
27.9    
28.1    
28.3    
28.5    
28.7    
28.9    
29.1    
29.3    
29.5    
29.7    
29.9    
30.1    
30.3    
30.5    
30.7    
30.9    
31.1    
31.3    
31.5    
31.7    
31.9    
32.1    
32.3    
32.5    
32.7    
32.9    
33.1    
33.3    
33.5    
33.7    
33.9    
34.1    
34.3    
34.5    
34.7    
34.9    
35.2    
35.4    
35.6    
35.8    
36.0    
36.2    
36.4    
36.6    
36.8    
37.0    
37.2    
37.4    
37.6    
37.8    
38.0    
38.2    
38.4    
38.6    
38.8    
39.0    
39.2    
39.4    
39.6    
39.8    
40.0    
40.2    
40.4    
40.6    
40.8    
41.0    
41.2    
41.4    
41.6    
41.8    
42.0    
42.2    
42.4    
42.6    
42.8    
43.0    
43.2    
43.4    
43.6    
43.8    
44.0    
44.2    
44.4    
44.6    
44.8    
45.1    
45.3    
45.5    
45.7    
45.9    
46.1    
46.3    
46.5    
46.7    
46.9    
47.1    
47.3    
47.5    
47.7    
47.9    
48.1    
48.3    
48.5    
48.7    
48.9    
49.1    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
50.9    
51.1    
51.3    
51.5    
51.7    
51.9    
52.1    
52.3    
52.5    
52.7    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.7    
54.9    
55.2    
55.4    
55.6    
55.8    
56.0    
56.2    
56.4    
56.6    
56.8    
57.0    
57.2    
57.4    
57.6    
57.8    
58.0    
58.2    
58.4    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.8    
60.0    
60.2    
60.4    
60.6    
60.8    
61.0    
61.2    
61.4    
61.6    
61.8    
62.0    
62.2    
62.4    
62.6    
62.8    
63.0    
63.2    
63.4    
63.6    
63.8    
64.0    
64.2    
64.4    
64.6    
64.8    
65.1    
65.3    
65.5    
65.7    
65.9    
66.1    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.7    
67.9    
68.1    
68.3    
68.5    
68.7    
68.9    
69.1    
69.3    
69.5    
69.7    
69.9    
70.1    
70.3    
70.5    
70.7    
70.9    
71.1    
71.3    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.1    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.2    
75.4    
75.6    
75.8    
76.0    
76.2    
76.4    
76.6    
76.8    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.8    
79.0    
79.2    
79.4    
79.6    
79.8    
80.0    
80.2    
80.4    
80.6    
80.8    
81.0    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.8    
83.0    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
85.1    
85.3    
85.5    
85.7    
85.9    
86.1    
86.3    
86.5    
86.7    
86.9    
87.1    
87.3    
87.5    
87.7    
87.9    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.5    
89.7    
89.9    
90.1    
90.3    
90.5    
90.7    
90.9    
91.1    
91.3    
91.5    
91.7    
91.9    
92.1    
92.3    
92.5    
92.7    
92.9    
93.1    
93.3    
93.5    
93.7    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.2    
95.4    
95.6    
95.8    
96.0    
96.2    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 40 predictions from path traversal
Error with prediction: snap lend_intergenic: 16369, rend_intergenic: 13197  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23631, rend_intergenic: 19065  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31534, rend_intergenic: 24870  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42203, rend_intergenic: 38330  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47274, rend_intergenic: 46162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56013, rend_intergenic: 53267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61416, rend_intergenic: 59935  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77385, rend_intergenic: 69555  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85056, rend_intergenic: 78990  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88369, rend_intergenic: 87424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106740, rend_intergenic: 91764  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117531, rend_intergenic: 115967  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123539, rend_intergenic: 121127  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139942, rend_intergenic: 129353  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145487, rend_intergenic: 139965  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149212, rend_intergenic: 147181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157567, rend_intergenic: 149561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159135, rend_intergenic: 158639  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163904, rend_intergenic: 159982  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166992, rend_intergenic: 166018  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176976, rend_intergenic: 167282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183823, rend_intergenic: 177599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 34 predictions persist after filtering for low support