-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_27/scaffold_27_2803546-3032884

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_27-snap.681-T1
Valid prediction for GlimmerHMM_glimmerT_56919-T1
Valid prediction for CodingQuarry_transcript_41842-T1
Valid prediction for Augustus_model.g37727.t1
Valid prediction for pasa_asmbl_36118.p1
Valid prediction for pasa_asmbl_36136.p1
Valid prediction for snap_scaffold_27-snap.691-T1
Couldn't classify 33519, 33551
Couldn't classify 36656, 36717
Sorry, prediction pasa_asmbl_36132.p1 fails validation.
(CAA)	 GG	33519-33551	GT	AGG
(GTC)	 AG	33879-33917	GT	GTG
(GAT)	 AG	34741-34857	GT	AGG
(GTA)	 AG	35086-35167	GT	AGG
(TGC)	 AG	35258-35338	GT	TGG
(CAT)	 AG	35492-35571	GT	AGG
(GTG)	 AG	35791-35897	GT	AAG
(TAT)	 AG	36223-36260	GT	TGG
(ACT)	 AG	36656-36717	GT	CGG
-recovered pasa_asmbl_36132.p1, internal, 33879, 33917
-recovered pasa_asmbl_36132.p1, internal, 34741, 34857
-recovered pasa_asmbl_36132.p1, internal, 35086, 35167
-recovered pasa_asmbl_36132.p1, internal, 35258, 35338
-recovered pasa_asmbl_36132.p1, internal, 35492, 35571
-recovered pasa_asmbl_36132.p1, internal, 35791, 35897
-recovered pasa_asmbl_36132.p1, internal, 36223, 36260
-recovered pasa_asmbl_36132.p1, internal, 36656, 36717
Valid prediction for CodingQuarry_transcript_41826-T1
Valid prediction for snap_scaffold_27-snap.673-T1
Valid prediction for pasa_asmbl_36150.p1
Valid prediction for GlimmerHMM_glimmerT_56930-T1
Valid prediction for GlimmerHMM_glimmerT_56905-T1
Valid prediction for snap_scaffold_27-snap.704-T1
Valid prediction for Augustus_model.g37716.t1
Valid prediction for HiQ_model.g37738.t1
Valid prediction for CodingQuarry_transcript_41825-T1
Valid prediction for snap_scaffold_27-snap.667-T1
Valid prediction for Augustus_model.g37717.t1
Valid prediction for CodingQuarry_transcript_41839-T1
Valid prediction for GlimmerHMM_glimmerT_56909-T1
Valid prediction for GlimmerHMM_glimmerT_56918-T1
Valid prediction for CodingQuarry_transcript_41831-T1
Valid prediction for GlimmerHMM_glimmerT_56921-T1
Valid prediction for CodingQuarry_transcript_41834-T1
Valid prediction for snap_scaffold_27-snap.690-T1
Valid prediction for CodingQuarry_transcript_41833-T1
Valid prediction for GlimmerHMM_glimmerT_56943-T1
Valid prediction for Augustus_model.g37736.t1
Valid prediction for GlimmerHMM_glimmerT_56941-T1
Valid prediction for GlimmerHMM_glimmerT_56917-T1
Valid prediction for Augustus_model.g37711.t1
Valid prediction for HiQ_model.g37712.t1
Couldn't classify 206248, 206388
Sorry, prediction pasa_asmbl_36162.p1 fails validation.
(CTG)	 AC	206248-206388	GT	AGG
(AGA)	 AG	207615-207690	GT	AGG
(GCT)	 AG	207945-208047	GT	GGG
(CTC)	 AG	208184-208277	GT	ACG
(GTC)	 AG	208430-208541	GT	GGG
(AAA)	 AG	208662-208768	GT	AGG
(CAA)	 AG	208883-208924	GT	AGG
(GCC)	 AG	209910-209995	GT	AGG
(GGC)	 AG	210574-210697	GT	AGG
(CGT)	 AG	211130-211248	GT	AGG
(CAC)	 AG	212034-212131	GT	AGG
(ATC)	 AG	213141-213305	GT	TGG
(ATC)	 AG	213938-214021	GT	AGG
(ACT)	 AG	214446-214526	GT	AGG
(GGT)	 AG	215505-215615	GT	TGG
(GTG)	 AG	216430-216549	GT	CAG
(ATC)	 AG	216733-216763	GT	AAG
(TGA)	 AG	216863-216962	GT	TGG
(GCA)	 AG	219204-219263	GT	TGG
(CCC)	 AG	220146-220250	GT	AGG
(ATG)	 AG	222126-222140	TC	AAT
add_exon() Sorry, pasa_asmbl_36162.p1 211130-211248-terminal-2 is invalid.
-recovered pasa_asmbl_36162.p1, terminal, 211130, 211248
-recovered pasa_asmbl_36162.p1, terminal, 222126, 222140
-recovered pasa_asmbl_36162.p1, internal, 207615, 207690
-recovered pasa_asmbl_36162.p1, internal, 207945, 208047
-recovered pasa_asmbl_36162.p1, internal, 208184, 208277
-recovered pasa_asmbl_36162.p1, internal, 208430, 208541
-recovered pasa_asmbl_36162.p1, internal, 208662, 208768
-recovered pasa_asmbl_36162.p1, internal, 208883, 208924
-recovered pasa_asmbl_36162.p1, internal, 209910, 209995
-recovered pasa_asmbl_36162.p1, internal, 210574, 210697
-recovered pasa_asmbl_36162.p1, internal, 211130, 211248
-recovered pasa_asmbl_36162.p1, internal, 212034, 212131
-recovered pasa_asmbl_36162.p1, internal, 213141, 213305
-recovered pasa_asmbl_36162.p1, internal, 213938, 214021
-recovered pasa_asmbl_36162.p1, internal, 214446, 214526
-recovered pasa_asmbl_36162.p1, internal, 215505, 215615
-recovered pasa_asmbl_36162.p1, internal, 216430, 216549
-recovered pasa_asmbl_36162.p1, internal, 216733, 216763
-recovered pasa_asmbl_36162.p1, internal, 216863, 216962
-recovered pasa_asmbl_36162.p1, internal, 219204, 219263
-recovered pasa_asmbl_36162.p1, internal, 220146, 220250
Valid prediction for snap_scaffold_27-snap.700-T1
Valid prediction for HiQ_model.g37731.t1
Valid prediction for snap_scaffold_27-snap.675-T1
Valid prediction for pasa_asmbl_36133.p1
Valid prediction for snap_scaffold_27-snap.672-T1
Valid prediction for GlimmerHMM_glimmerT_56907-T1
Valid prediction for GlimmerHMM_glimmerT_56913-T1
Valid prediction for Augustus_model.g37720.t1
Valid prediction for GlimmerHMM_glimmerT_56915-T1
Valid prediction for GlimmerHMM_glimmerT_56940-T1
Valid prediction for snap_scaffold_27-snap.679-T1
Valid prediction for GlimmerHMM_glimmerT_56901-T1
Valid prediction for snap_scaffold_27-snap.670-T1
Valid prediction for GlimmerHMM_glimmerT_56942-T1
Valid prediction for snap_scaffold_27-snap.703-T1
Valid prediction for snap_scaffold_27-snap.676-T1
Valid prediction for snap_scaffold_27-snap.711-T1
Valid prediction for snap_scaffold_27-snap.708-T1
Valid prediction for snap_scaffold_27-snap.685-T1
Valid prediction for snap_scaffold_27-snap.705-T1
Valid prediction for pasa_asmbl_36142.p1
Valid prediction for HiQ_model.g37737.t1
Valid prediction for CodingQuarry_transcript_41832-T1
Valid prediction for snap_scaffold_27-snap.697-T1
Valid prediction for pasa_asmbl_36149.p1
Valid prediction for snap_scaffold_27-snap.661-T1
Couldn't classify 72774, 72981
Sorry, prediction pasa_asmbl_36141.p1 fails validation.
(GCT)	 TT	72774-72981	GT	TGG
(AGC)	 AG	73223-73334	GT	AGG
(ACA)	 AG	73459-73525	GT	AGG
(AGA)	 AG	73707-73778	GT	TGG
(GGG)	 AG	73885-74025	TG	GAT
-recovered pasa_asmbl_36141.p1, terminal, 73885, 74025
-recovered pasa_asmbl_36141.p1, internal, 73223, 73334
-recovered pasa_asmbl_36141.p1, internal, 73459, 73525
-recovered pasa_asmbl_36141.p1, internal, 73707, 73778
Valid prediction for GlimmerHMM_glimmerT_56910-T1
Valid prediction for GlimmerHMM_glimmerT_56916-T1
Valid prediction for snap_scaffold_27-snap.668-T1
Valid prediction for snap_scaffold_27-snap.680-T1
Valid prediction for CodingQuarry_transcript_41830-T1
Valid prediction for snap_scaffold_27-snap.674-T1
Valid prediction for snap_scaffold_27-snap.669-T1
Valid prediction for GlimmerHMM_glimmerT_56911-T1
Valid prediction for GlimmerHMM_glimmerT_56922-T1
Valid prediction for snap_scaffold_27-snap.665-T1
Couldn't classify 25836, 25937
Sorry, prediction pasa_asmbl_36127.p2 fails validation.
(CTA)	 CG	25836-25937	GT	ATG
(GGA)	 AG	28870-28938	GT	AGG
(AAA)	 AG	29154-29327	GT	AGG
(GAA)	 AG	29784-29910	GT	CGG
(GGC)	 AG	30049-30140	GT	AGG
(GTG)	 AG	30359-30451	GT	AGG
(GGT)	 AG	30592-30747	GT	GGG
(GTG)	 AG	30828-30899	GT	AGG
(GGT)	 AG	31000-31067	GT	AGG
(CTA)	 AG	31297-31405	GT	AGG
(GAG)	 AG	31708-31872	AG	AAA
-recovered pasa_asmbl_36127.p2, terminal, 31708, 31872
-recovered pasa_asmbl_36127.p2, internal, 28870, 28938
-recovered pasa_asmbl_36127.p2, internal, 29154, 29327
-recovered pasa_asmbl_36127.p2, internal, 29784, 29910
-recovered pasa_asmbl_36127.p2, internal, 30049, 30140
-recovered pasa_asmbl_36127.p2, internal, 30359, 30451
-recovered pasa_asmbl_36127.p2, internal, 30592, 30747
-recovered pasa_asmbl_36127.p2, internal, 30828, 30899
-recovered pasa_asmbl_36127.p2, internal, 31000, 31067
-recovered pasa_asmbl_36127.p2, internal, 31297, 31405
Valid prediction for GlimmerHMM_glimmerT_56914-T1
Valid prediction for snap_scaffold_27-snap.706-T1
Valid prediction for snap_scaffold_27-snap.709-T1
Valid prediction for Augustus_model.g37723.t1
Valid prediction for GlimmerHMM_glimmerT_56908-T1
Valid prediction for CodingQuarry_transcript_41843-T1
Valid prediction for GlimmerHMM_glimmerT_56934-T1
Valid prediction for Augustus_model.g37713.t1
Valid prediction for snap_scaffold_27-snap.677-T1
Valid prediction for Augustus_model.g37707.t1
Valid prediction for GlimmerHMM_glimmerT_56926-T1
Valid prediction for CodingQuarry_transcript_41841-T1
Valid prediction for HiQ_model.g37718.t1
Valid prediction for Augustus_model.g37714.t1
Valid prediction for GlimmerHMM_glimmerT_56939-T1
Valid prediction for GlimmerHMM_glimmerT_56923-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_56945-T1
Valid prediction for CodingQuarry_transcript_41829-T1
Couldn't classify 226176, 227455
Sorry, prediction pasa_asmbl_36858.p1 fails validation.
(ATG)	 AA	224288-224420	GT	GGG
(GAG)	 AG	224607-224735	GT	TGG
(GTA)	 AG	225517-225651	GT	CGG
(GTG)	 AG	225834-225977	GT	AGG
(CCA)	 AG	226176-227455	GA	GGG
-recovered pasa_asmbl_36858.p1, initial, 224288, 224420
-recovered pasa_asmbl_36858.p1, internal, 224607, 224735
-recovered pasa_asmbl_36858.p1, internal, 225517, 225651
-recovered pasa_asmbl_36858.p1, internal, 225834, 225977
Valid prediction for snap_scaffold_27-snap.698-T1
Valid prediction for snap_scaffold_27-snap.671-T1
Valid prediction for snap_scaffold_27-snap.699-T1
Valid prediction for Augustus_model.g37729.t1
Valid prediction for snap_scaffold_27-snap.689-T1
Valid prediction for snap_scaffold_27-snap.688-T1
Valid prediction for pasa_asmbl_36859.p1
Valid prediction for Augustus_model.g37734.t1
Valid prediction for HiQ_model.g37710.t1
Valid prediction for GlimmerHMM_glimmerT_56937-T1
Valid prediction for GlimmerHMM_glimmerT_56899-T1
Valid prediction for Augustus_model.g37728.t1
Valid prediction for CodingQuarry_transcript_41835-T1
Valid prediction for GlimmerHMM_glimmerT_56931-T1
Valid prediction for snap_scaffold_27-snap.664-T1
Valid prediction for Augustus_model.g37724.t1
Valid prediction for Augustus_model.g37733.t1
Valid prediction for pasa_asmbl_36875.p1
Valid prediction for CodingQuarry_transcript_41840-T1
Valid prediction for snap_scaffold_27-snap.710-T1
Valid prediction for Augustus_model.g37722.t1
Valid prediction for GlimmerHMM_glimmerT_56936-T1
Valid prediction for snap_scaffold_27-snap.662-T1
Valid prediction for snap_scaffold_27-snap.687-T1
Couldn't classify 93878, 93912
Couldn't classify 94655, 94763
Sorry, prediction pasa_asmbl_36872.p1 fails validation.
(TAC)	 GG	93878-93912	GT	AAG
(TTG)	 AG	94037-94166	GT	ACG
(GTC)	 AG	94274-94404	GT	AAG
(ATC)	 AG	94655-94763	CG	AGC
-recovered pasa_asmbl_36872.p1, internal, 94037, 94166
-recovered pasa_asmbl_36872.p1, internal, 94274, 94404
Valid prediction for GlimmerHMM_glimmerT_56903-T1
Valid prediction for pasa_asmbl_36868.p1
Valid prediction for Augustus_model.g37732.t1
Valid prediction for snap_scaffold_27-snap.707-T1
Valid prediction for snap_scaffold_27-snap.701-T1
Valid prediction for GlimmerHMM_glimmerT_56900-T1
Valid prediction for snap_scaffold_27-snap.678-T1
Valid prediction for snap_scaffold_27-snap.660-T1
Couldn't classify 7886, 8178
Sorry, prediction pasa_asmbl_36884.p1 fails validation.
(ACA)	 AC	7886-8178	GT	AGG
(CCA)	 AG	9018-9162	GT	GAG
-recovered pasa_asmbl_36884.p1, terminal, 9018, 9162
-recovered pasa_asmbl_36884.p1, internal, 9018, 9162
Valid prediction for GlimmerHMM_glimmerT_56920-T1
Valid prediction for GlimmerHMM_glimmerT_56902-T1
Valid prediction for GlimmerHMM_glimmerT_56933-T1
Valid prediction for Augustus_model.g37705.t1
Valid prediction for GlimmerHMM_glimmerT_56927-T1
Valid prediction for CodingQuarry_transcript_41838-T1
Valid prediction for Augustus_model.g37735.t1
Valid prediction for snap_scaffold_27-snap.692-T1
Valid prediction for snap_scaffold_27-snap.695-T1
Valid prediction for snap_scaffold_27-snap.686-T1
Valid prediction for CodingQuarry_transcript_41836-T1
Valid prediction for snap_scaffold_27-snap.683-T1
Valid prediction for snap_scaffold_27-snap.702-T1
Couldn't classify 44667, 44726
Couldn't classify 44815, 45078
Sorry, prediction pasa_asmbl_36882.p1 fails validation.
(AAG)	 GG	44667-44726	GT	AGG
(ATG)	 AG	44815-45078	CC	GGC
Valid prediction for Augustus_model.g37719.t1
Valid prediction for snap_scaffold_27-snap.663-T1
Valid prediction for snap_scaffold_27-snap.684-T1
Valid prediction for GlimmerHMM_glimmerT_56924-T1
Valid prediction for HiQ_model.g37709.t1
Valid prediction for GlimmerHMM_glimmerT_56928-T1
Valid prediction for HiQ_model.g37708.t1
Valid prediction for snap_scaffold_27-snap.666-T1
Valid prediction for GlimmerHMM_glimmerT_56938-T1
Valid prediction for GlimmerHMM_glimmerT_56904-T1
Valid prediction for CodingQuarry_transcript_41837-T1
Valid prediction for HiQ_model.g37721.t1
Valid prediction for snap_scaffold_27-snap.659-T1
Valid prediction for GlimmerHMM_glimmerT_56906-T1
Valid prediction for snap_scaffold_27-snap.682-T1
Valid prediction for Augustus_model.g37706.t1
Couldn't classify 49557, 49925
Sorry, prediction pasa_asmbl_37190.p1 fails validation.
(TCT)	 TC	49557-49925	TG	TCT
Valid prediction for HiQ_model.g37730.t1
Valid prediction for snap_scaffold_27-snap.658-T1
Valid prediction for GlimmerHMM_glimmerT_56929-T1
Valid prediction for CodingQuarry_transcript_41827-T1
Valid prediction for GlimmerHMM_glimmerT_56925-T1
Couldn't classify 45133, 45729
Sorry, prediction pasa_asmbl_36881.p1 fails validation.
(CTG)	 GT	45133-45729	GT	AGG
(GTG)	 AG	45953-46165	CT	AAC
-recovered pasa_asmbl_36881.p1, terminal, 45953, 46165
Valid prediction for Augustus_model.g37739.t1
Valid prediction for pasa_asmbl_36860.p1
Valid prediction for Augustus_model.g37715.t1
Valid prediction for snap_scaffold_27-snap.696-T1
Valid prediction for pasa_asmbl_36877.p1
Valid prediction for GlimmerHMM_glimmerT_56912-T1
Valid prediction for CodingQuarry_transcript_41828-T1
Couldn't classify 148242, 148374
Sorry, prediction pasa_asmbl_36866.p1 fails validation.
(GTG)	 CC	148242-148374	GT	TGG
(GTT)	 AG	148592-148681	GT	CAG
(AGA)	 AG	148828-148936	GT	CAG
(TAA)	 AG	149061-149234	GT	AGG
(GCC)	 AG	149546-149630	GT	AAG
-recovered pasa_asmbl_36866.p1, terminal, 149546, 149630
-recovered pasa_asmbl_36866.p1, internal, 148592, 148681
-recovered pasa_asmbl_36866.p1, internal, 148828, 148936
-recovered pasa_asmbl_36866.p1, internal, 149061, 149234
-recovered pasa_asmbl_36866.p1, internal, 149546, 149630
Valid prediction for Augustus_model.g37725.t1
Valid prediction for snap_scaffold_27-snap.693-T1
Valid prediction for Augustus_model.g37726.t1
Valid prediction for pasa_asmbl_36864.p1
Valid prediction for GlimmerHMM_glimmerT_56932-T1
Valid prediction for snap_scaffold_27-snap.694-T1
Valid prediction for GlimmerHMM_glimmerT_56944-T1
Valid prediction for GlimmerHMM_glimmerT_56935-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 31872, rend_intergenic: 27359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138471, rend_intergenic: 134562  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180211, rend_intergenic: 176665  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228007, rend_intergenic: 223845  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 229339
-exon list size: 605


building trellis

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40.7    
40.9    
41.0    
41.2    
41.4    
41.5    
41.7    
41.8    
42.0    
42.2    
42.3    
42.5    
42.7    
42.8    
43.0    
43.2    
43.3    
43.5    
43.7    
43.8    
44.0    
44.2    
44.3    
44.5    
44.6    
44.8    
45.0    
45.1    
45.3    
45.5    
45.6    
45.8    
46.0    
46.1    
46.3    
46.5    
46.6    
46.8    
47.0    
47.1    
47.3    
47.4    
47.6    
47.8    
47.9    
48.1    
48.3    
48.4    
48.6    
48.8    
48.9    
49.1    
49.3    
49.4    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.6    
50.7    
50.9    
51.1    
51.2    
51.4    
51.6    
51.7    
51.9    
52.1    
52.2    
52.4    
52.6    
52.7    
52.9    
53.0    
53.2    
53.4    
53.5    
53.7    
53.9    
54.0    
54.2    
54.4    
54.5    
54.7    
54.9    
55.0    
55.2    
55.4    
55.5    
55.7    
55.8    
56.0    
56.2    
56.3    
56.5    
56.7    
56.8    
57.0    
57.2    
57.3    
57.5    
57.7    
57.8    
58.0    
58.2    
58.3    
58.5    
58.6    
58.8    
59.0    
59.1    
59.3    
59.5    
59.6    
59.8    
60.0    
60.1    
60.3    
60.5    
60.6    
60.8    
61.0    
61.1    
61.3    
61.4    
61.6    
61.8    
61.9    
62.1    
62.3    
62.4    
62.6    
62.8    
62.9    
63.1    
63.3    
63.4    
63.6    
63.8    
63.9    
64.1    
64.3    
64.4    
64.6    
64.7    
64.9    
65.1    
65.2    
65.4    
65.6    
65.7    
65.9    
66.1    
66.2    
66.4    
66.6    
66.7    
66.9    
67.1    
67.2    
67.4    
67.5    
67.7    
67.9    
68.0    
68.2    
68.4    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.5    
69.7    
69.9    
70.0    
70.2    
70.3    
70.5    
70.7    
70.8    
71.0    
71.2    
71.3    
71.5    
71.7    
71.8    
72.0    
72.2    
72.3    
72.5    
72.7    
72.8    
73.0    
73.1    
73.3    
73.5    
73.6    
73.8    
74.0    
74.1    
74.3    
74.5    
74.6    
74.8    
75.0    
75.1    
75.3    
75.5    
75.6    
75.8    
75.9    
76.1    
76.3    
76.4    
76.6    
76.8    
76.9    
77.1    
77.3    
77.4    
77.6    
77.8    
77.9    
78.1    
78.3    
78.4    
78.6    
78.7    
78.9    
79.1    
79.2    
79.4    
79.6    
79.7    
79.9    
80.1    
80.2    
80.4    
80.6    
80.7    
80.9    
81.1    
81.2    
81.4    
81.5    
81.7    
81.9    
82.0    
82.2    
82.4    
82.5    
82.7    
82.9    
83.0    
83.2    
83.4    
83.5    
83.7    
83.9    
84.0    
84.2    
84.3    
84.5    
84.7    
84.8    
85.0    
85.2    
85.3    
85.5    
85.7    
85.8    
86.0    
86.2    
86.3    
86.5    
86.7    
86.8    
87.0    
87.1    
87.3    
87.5    
87.6    
87.8    
88.0    
88.1    
88.3    
88.5    
88.6    
88.8    
89.0    
89.1    
89.3    
89.5    
89.6    
89.8    
90.0    
90.1    
90.3    
90.4    
90.6    
90.8    
90.9    
91.1    
91.3    
91.4    
91.6    
91.8    
91.9    
92.1    
92.3    
92.4    
92.6    
92.8    
92.9    
93.1    
93.2    
93.4    
93.6    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.7    
94.9    
95.1    
95.2    
95.4    
95.6    
95.7    
95.9    
96.0    
96.2    
96.4    
96.5    
96.7    
96.9    
97.0    
97.2    
97.4    
97.5    
97.7    
97.9    
98.0    
98.2    
98.4    
98.5    
98.7    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 45 predictions from path traversal
Error with prediction: snap lend_intergenic: 31872, rend_intergenic: 27359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138471, rend_intergenic: 134562  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180211, rend_intergenic: 176665  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228007, rend_intergenic: 223845  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 44 predictions persist after filtering for low support