-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2639

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 849, 1142
Sorry, prediction snap_scaffold_2639-snap.1-T1 fails validation.
(ATG)	 AG	481-560	GT	CTG
(GTG)	 AG	591-778	GT	GGG
(TCT)	 AG	849-1142	GT	AGG
-recovered snap_scaffold_2639-snap.1-T1, initial, 481, 560
-recovered snap_scaffold_2639-snap.1-T1, internal, 481, 560
-recovered snap_scaffold_2639-snap.1-T1, internal, 591, 778
-recovered snap_scaffold_2639-snap.1-T1, internal, 849, 1142

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_61656-T1
Valid prediction for Augustus_model.g40950.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1164
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support