-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2620

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 84, 212
Couldn't classify 838, 912
Sorry, prediction snap_scaffold_2620-snap.1-T1 fails validation.
(GCA)	 AG	84-212	GT	AGG
(TTC)	 AG	838-912	GT	AGG
-recovered snap_scaffold_2620-snap.1-T1, internal, 84, 212
-recovered snap_scaffold_2620-snap.1-T1, internal, 838, 912
Valid prediction for HiQ_model.g40946.t1
Couldn't classify 84, 212
Sorry, prediction GlimmerHMM_glimmerT_61650-T1 fails validation.
(GCA)	 AG	84-212	GT	AGG
(TTC)	 AG	838-1002	AG	AAA
-recovered GlimmerHMM_glimmerT_61650-T1, terminal, 838, 1002
-recovered GlimmerHMM_glimmerT_61650-T1, internal, 84, 212

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1172
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support