-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_262

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_262-snap.1-T1
Valid prediction for snap_scaffold_262-snap.2-T1
Valid prediction for Augustus_model.g39798.t1
Couldn't classify 4062, 4547
Sorry, prediction GlimmerHMM_glimmerT_60097-T1 fails validation.
(ATG)	 GG	1235-1394	GT	AAG
(TTA)	 AG	4062-4547	GT	AGG
-recovered GlimmerHMM_glimmerT_60097-T1, initial, 1235, 1394
-recovered GlimmerHMM_glimmerT_60097-T1, internal, 4062, 4547
Couldn't classify 665, 1013
Couldn't classify 1185, 1294
Sorry, prediction pasa_asmbl_35925.p1 fails validation.
(GGA)	 TA	665-1013	GT	AGG
(CTG)	 AG	1185-1294	AG	ACA

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 8857
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support