-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_259

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 7034, 7095
Sorry, prediction snap_scaffold_259-snap.1-T1 fails validation.
(ATG)	 GG	1736-1867	GT	GGG
(GAA)	 AG	4152-4230	GT	AGG
(AAT)	 AG	7034-7095	GT	AGG
-recovered snap_scaffold_259-snap.1-T1, initial, 1736, 1867
-recovered snap_scaffold_259-snap.1-T1, internal, 4152, 4230
-recovered snap_scaffold_259-snap.1-T1, internal, 7034, 7095

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 388, 482
Couldn't classify 2961, 3182
Sorry, prediction snap_scaffold_259-snap.2-T1 fails validation.
(GAG)	 AG	388-482	GT	AGG
(AAC)	 AG	2961-3182	GT	AAG
-recovered snap_scaffold_259-snap.2-T1, internal, 388, 482
-recovered snap_scaffold_259-snap.2-T1, internal, 2961, 3182

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7095, rend_intergenic: 5702  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 8883
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 7095, rend_intergenic: 5702  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support