-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2519

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 412, 548
Sorry, prediction Augustus_model.g40916.t1 fails validation.
(TGA)	 AG	412-548	GT	AGG
(TGA)	 AG	806-909	AA	AGA
-recovered Augustus_model.g40916.t1, terminal, 806, 909
-recovered Augustus_model.g40916.t1, internal, 412, 548
Valid prediction for GlimmerHMM_glimmerT_61629-T1
add_exon() Sorry, GlimmerHMM_glimmerT_61629-T1 412-595-terminal-1 is invalid.
Valid prediction for snap_scaffold_2519-snap.1-T1
add_exon() Sorry, snap_scaffold_2519-snap.1-T1 412-595-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1230
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support