-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_25/scaffold_25_8415773-8764502 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g36268.t1 Valid prediction for snap_scaffold_25-snap.1846-T1 Valid prediction for snap_scaffold_25-snap.1841-T1 Valid prediction for Augustus_model.g36269.t1 Valid prediction for Augustus_model.g36270.t1 Valid prediction for snap_scaffold_25-snap.1873-T1 Couldn't classify 262548, 262633 Sorry, prediction pasa_asmbl_33746.p1 fails validation. (GTC) CG 262548-262633 GT AGG (GAG) AG 264025-264197 GT AGG (GTG) AG 264607-264803 CC AGC -recovered pasa_asmbl_33746.p1, terminal, 264607, 264803 -recovered pasa_asmbl_33746.p1, internal, 264025, 264197 Valid prediction for snap_scaffold_25-snap.1892-T1 Valid prediction for snap_scaffold_25-snap.1883-T1 Valid prediction for GlimmerHMM_glimmerT_54695-T1 Valid prediction for snap_scaffold_25-snap.1865-T1 Valid prediction for snap_scaffold_25-snap.1840-T1 Valid prediction for snap_scaffold_25-snap.1871-T1 Valid prediction for GlimmerHMM_glimmerT_54683-T1 Valid prediction for GlimmerHMM_glimmerT_54682-T1 Valid prediction for HiQ_model.g36297.t1 Valid prediction for Augustus_model.g36291.t1 Valid prediction for GlimmerHMM_glimmerT_54669-T1 Valid prediction for CodingQuarry_transcript_38821-T1 Valid prediction for Augustus_model.g36290.t1 Valid prediction for HiQ_model.g36299.t1 Couldn't classify 248439, 248486 Couldn't classify 249735, 249895 Sorry, prediction pasa_asmbl_33897.p1 fails validation. (AAA) CC 248439-248486 GT TGG (GAG) AG 248663-248680 GT CGG (TCG) AG 248783-248936 GT GGG (TTC) AG 249201-249321 GT AGG (GGA) AG 249405-249529 GT TGG (GCG) AG 249735-249895 GT AGG -recovered pasa_asmbl_33897.p1, internal, 248663, 248680 -recovered pasa_asmbl_33897.p1, internal, 248783, 248936 -recovered pasa_asmbl_33897.p1, internal, 249201, 249321 -recovered pasa_asmbl_33897.p1, internal, 249405, 249529 -recovered pasa_asmbl_33897.p1, internal, 249735, 249895 Valid prediction for snap_scaffold_25-snap.1881-T1 Valid prediction for CodingQuarry_transcript_38811-T1 Valid prediction for snap_scaffold_25-snap.1844-T1 Valid prediction for Augustus_model.g36285.t1 Valid prediction for GlimmerHMM_glimmerT_54662-T1 Valid prediction for pasa_asmbl_33737.p1 Valid prediction for snap_scaffold_25-snap.1876-T1 Valid prediction for GlimmerHMM_glimmerT_54691-T1 Valid prediction for HiQ_model.g36302.t1 Valid prediction for Augustus_model.g36300.t1 Valid prediction for GlimmerHMM_glimmerT_54664-T1 Valid prediction for snap_scaffold_25-snap.1879-T1 Valid prediction for snap_scaffold_25-snap.1891-T1 Valid prediction for Augustus_model.g36287.t1 Valid prediction for GlimmerHMM_glimmerT_54698-T1 Valid prediction for snap_scaffold_25-snap.1872-T1 Valid prediction for pasa_asmbl_33762.p1 Couldn't classify 292757, 292779 Sorry, prediction pasa_asmbl_33755.p1 fails validation. (TCT) GG 292757-292779 GT AGG (AGA) AG 292882-293049 GT AGG (GGA) AG 293157-293246 GT CGG (GAG) AG 293371-293460 GT AGG (GCA) AG 293606-293768 GT AGG (GTG) AG 293891-294094 CT GAC -recovered pasa_asmbl_33755.p1, terminal, 293891, 294094 -recovered pasa_asmbl_33755.p1, internal, 292882, 293049 -recovered pasa_asmbl_33755.p1, internal, 293157, 293246 -recovered pasa_asmbl_33755.p1, internal, 293371, 293460 -recovered pasa_asmbl_33755.p1, internal, 293606, 293768 Valid prediction for CodingQuarry_transcript_38822-T1 Valid prediction for snap_scaffold_25-snap.1869-T1 Couldn't classify 318410, 318907 Sorry, prediction pasa_asmbl_33763.p1 fails validation. (TGG) CA 318410-318907 GA GTG Valid prediction for snap_scaffold_25-snap.1878-T1 Valid prediction for GlimmerHMM_glimmerT_54694-T1 Valid prediction for GlimmerHMM_glimmerT_54686-T1 Valid prediction for GlimmerHMM_glimmerT_54688-T1 Valid prediction for snap_scaffold_25-snap.1848-T1 Valid prediction for snap_scaffold_25-snap.1862-T1 Valid prediction for Augustus_model.g36283.t1 Valid prediction for snap_scaffold_25-snap.1853-T1 Valid prediction for snap_scaffold_25-snap.1895-T1 Valid prediction for GlimmerHMM_glimmerT_54681-T1 Valid prediction for HiQ_model.g36272.t1 Valid prediction for GlimmerHMM_glimmerT_54671-T1 Valid prediction for snap_scaffold_25-snap.1867-T1 Valid prediction for GlimmerHMM_glimmerT_54667-T1 Valid prediction for snap_scaffold_25-snap.1890-T1 Valid prediction for Augustus_model.g36289.t1 Valid prediction for GlimmerHMM_glimmerT_54690-T1 Valid prediction for GlimmerHMM_glimmerT_54700-T1 Valid prediction for Augustus_model.g36281.t1 Couldn't classify 316393, 316557 Couldn't classify 316654, 316872 Sorry, prediction pasa_asmbl_33870.p1 fails validation. (GTT) AT 316393-316557 GT AGG (GTG) AG 316654-316872 TC AGT Valid prediction for GlimmerHMM_glimmerT_54697-T1 Valid prediction for GlimmerHMM_glimmerT_54665-T1 Valid prediction for Augustus_model.g36284.t1 Couldn't classify 250719, 250744 Sorry, prediction pasa_asmbl_33741.p1 fails validation. (ATC) AC 250719-250744 GT AGG (AGA) AG 250836-250932 GT CTG (ATC) AG 251430-251502 GT TAG (TGA) AG 251578-251755 GT GAG (TGC) AG 251871-252055 GT CTG (GGC) AG 252151-252239 GT AGG (ATC) AG 252338-252418 GT AGG (ACC) AG 252930-253025 GT AGG (AGT) AG 253779-253982 CA AGC -recovered pasa_asmbl_33741.p1, terminal, 253779, 253982 -recovered pasa_asmbl_33741.p1, internal, 250836, 250932 -recovered pasa_asmbl_33741.p1, internal, 251430, 251502 -recovered pasa_asmbl_33741.p1, internal, 251578, 251755 -recovered pasa_asmbl_33741.p1, internal, 251871, 252055 -recovered pasa_asmbl_33741.p1, internal, 252151, 252239 -recovered pasa_asmbl_33741.p1, internal, 252338, 252418 -recovered pasa_asmbl_33741.p1, internal, 252930, 253025 Valid prediction for snap_scaffold_25-snap.1887-T1 Valid prediction for snap_scaffold_25-snap.1870-T1 Valid prediction for snap_scaffold_25-snap.1856-T1 Couldn't classify 318998, 319202 Couldn't classify 320245, 320586 Sorry, prediction pasa_asmbl_33764.p1 fails validation. (GTG) GT 318998-319202 GT AGG (GGT) AG 319525-319688 GT AGG (GCT) AG 319785-319910 GT CTG (GAT) AG 320007-320138 GT TGG (CTC) AG 320245-320586 TG GAT -recovered pasa_asmbl_33764.p1, internal, 319525, 319688 -recovered pasa_asmbl_33764.p1, internal, 319785, 319910 -recovered pasa_asmbl_33764.p1, internal, 320007, 320138 Valid prediction for CodingQuarry_transcript_38819-T1 Valid prediction for pasa_asmbl_33765.p1 Valid prediction for GlimmerHMM_glimmerT_54689-T1 Valid prediction for snap_scaffold_25-snap.1880-T1 Valid prediction for snap_scaffold_25-snap.1882-T1 Valid prediction for snap_scaffold_25-snap.1850-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_54679-T1 Valid prediction for GlimmerHMM_glimmerT_54678-T1 Valid prediction for Augustus_model.g36264.t1 Valid prediction for Augustus_model.g36282.t1 Valid prediction for snap_scaffold_25-snap.1839-T1 Couldn't classify 245834, 245887 Sorry, prediction pasa_asmbl_34453.p1 fails validation. (GGG) AG 245834-245887 GT CTG (GGA) AG 246235-246288 GT AGG (GGA) AG 246365-246472 GT CGG (GGT) AG 247257-247310 GT CCG (GGT) AG 247994-248047 GT AGG (GGT) AG 248282-248338 GT CAG (GGT) AG 249127-249180 GT AGG (GGT) AG 249881-249934 GT CTG (GGG) AG 250051-250104 GT TGG (GGA) AG 251152-251205 GT AAG (GGG) AG 251598-251705 GT AGG (GGT) AG 253783-253890 GT AGG (GGG) AG 253987-254094 GT TAG (GGG) AG 255156-255209 GT AGG (GGG) AG 255386-255448 GT TGG (GGC) AG 255532-255585 GT CTG (GGT) AG 256022-256057 GT TGG (GGA) AG 256782-256817 GT GAG (GGT) AG 256911-256937 GT CTG (AGA) AG 257415-257468 GT AGG (ACC) AG 257586-257754 GT CGG (GCT) AG 257877-257986 GT AGG (ATG) AG 258334-258558 GT AGG (ATC) AG 258650-258796 AT GAA -recovered pasa_asmbl_34453.p1, initial, 258334, 258558 -recovered pasa_asmbl_34453.p1, terminal, 258650, 258796 -recovered pasa_asmbl_34453.p1, internal, 245834, 245887 -recovered pasa_asmbl_34453.p1, internal, 246235, 246288 -recovered pasa_asmbl_34453.p1, internal, 246365, 246472 -recovered pasa_asmbl_34453.p1, internal, 247257, 247310 -recovered pasa_asmbl_34453.p1, internal, 247994, 248047 -recovered pasa_asmbl_34453.p1, internal, 248282, 248338 -recovered pasa_asmbl_34453.p1, internal, 249127, 249180 -recovered pasa_asmbl_34453.p1, internal, 249881, 249934 -recovered pasa_asmbl_34453.p1, internal, 250051, 250104 -recovered pasa_asmbl_34453.p1, internal, 251152, 251205 -recovered pasa_asmbl_34453.p1, internal, 251598, 251705 -recovered pasa_asmbl_34453.p1, internal, 253783, 253890 -recovered pasa_asmbl_34453.p1, internal, 253987, 254094 -recovered pasa_asmbl_34453.p1, internal, 255156, 255209 -recovered pasa_asmbl_34453.p1, internal, 255386, 255448 -recovered pasa_asmbl_34453.p1, internal, 255532, 255585 -recovered pasa_asmbl_34453.p1, internal, 256022, 256057 -recovered pasa_asmbl_34453.p1, internal, 256782, 256817 -recovered pasa_asmbl_34453.p1, internal, 256911, 256937 -recovered pasa_asmbl_34453.p1, internal, 257415, 257468 -recovered pasa_asmbl_34453.p1, internal, 257586, 257754 -recovered pasa_asmbl_34453.p1, internal, 257877, 257986 -recovered pasa_asmbl_34453.p1, internal, 258334, 258558 Couldn't classify 77131, 77300 Couldn't classify 77546, 77640 Sorry, prediction pasa_asmbl_34457.p1 fails validation. (ATG) AG 76589-76623 GT GGG (TGA) AG 77131-77300 AT CAA (GTA) AC 77546-77640 GT TGG (GAA) AG 77805-77867 GT AGG (GCT) AG 77969-78097 GT AGG (CTC) AG 78270-78376 GT GTG (GAT) AG 78484-78578 GT CGG (ATC) AG 78884-78960 TG GAT -recovered pasa_asmbl_34457.p1, initial, 76589, 76623 -recovered pasa_asmbl_34457.p1, terminal, 78884, 78960 -recovered pasa_asmbl_34457.p1, internal, 76589, 76623 -recovered pasa_asmbl_34457.p1, internal, 77805, 77867 -recovered pasa_asmbl_34457.p1, internal, 77969, 78097 -recovered pasa_asmbl_34457.p1, internal, 78270, 78376 -recovered pasa_asmbl_34457.p1, internal, 78484, 78578 Valid prediction for Augustus_model.g36277.t1 Couldn't classify 321325, 321424 Sorry, prediction pasa_asmbl_34443.p1 fails validation. (GCG) AG 321325-321424 GT AGG (GTA) AG 322124-322197 GT AGG (GAC) AG 323473-323592 GT AGG (CCC) AG 325488-325544 CA AAC -recovered pasa_asmbl_34443.p1, terminal, 325488, 325544 -recovered pasa_asmbl_34443.p1, internal, 321325, 321424 -recovered pasa_asmbl_34443.p1, internal, 322124, 322197 -recovered pasa_asmbl_34443.p1, internal, 323473, 323592 Couldn't classify 132626, 132913 Couldn't classify 133009, 133263 Sorry, prediction pasa_asmbl_34456.p1 fails validation. (CTG) AC 132626-132913 GT TGG (TAT) AG 133009-133263 GA AGG Valid prediction for snap_scaffold_25-snap.1854-T1 Valid prediction for snap_scaffold_25-snap.1860-T1 Valid prediction for snap_scaffold_25-snap.1868-T1 Valid prediction for snap_scaffold_25-snap.1857-T1 Valid prediction for GlimmerHMM_glimmerT_54674-T1 Valid prediction for snap_scaffold_25-snap.1836-T1 Valid prediction for GlimmerHMM_glimmerT_54702-T1 Couldn't classify 264028, 264108 Sorry, prediction pasa_asmbl_34450.p1 fails validation. (ATG) TG 261071-261159 GT AAG (CTG) AG 261473-261538 GT AGG (TTT) AG 262929-263035 GT TGG (ACT) AG 263111-263196 GT GAG (ATC) AG 264028-264108 AA AGA -recovered pasa_asmbl_34450.p1, initial, 261071, 261159 -recovered pasa_asmbl_34450.p1, internal, 261473, 261538 -recovered pasa_asmbl_34450.p1, internal, 262929, 263035 -recovered pasa_asmbl_34450.p1, internal, 263111, 263196 Valid prediction for HiQ_model.g36266.t1 Valid prediction for snap_scaffold_25-snap.1888-T1 Valid prediction for Augustus_model.g36276.t1 Valid prediction for GlimmerHMM_glimmerT_54670-T1 Valid prediction for CodingQuarry_transcript_38815-T1 Valid prediction for GlimmerHMM_glimmerT_54680-T1 Valid prediction for snap_scaffold_25-snap.1847-T1 Valid prediction for CodingQuarry_transcript_38818-T1 Couldn't classify 339174, 339710 Sorry, prediction pasa_asmbl_33734.p1 fails validation. (ATG) GG 339174-339710 AC TCA Valid prediction for snap_scaffold_25-snap.1855-T1 Valid prediction for snap_scaffold_25-snap.1886-T1 Valid prediction for GlimmerHMM_glimmerT_54687-T1 Valid prediction for Augustus_model.g36275.t1 Valid prediction for snap_scaffold_25-snap.1884-T1 Valid prediction for HiQ_model.g36293.t1 Valid prediction for GlimmerHMM_glimmerT_54668-T1 Valid prediction for pasa_asmbl_34466.p1 Valid prediction for snap_scaffold_25-snap.1849-T1 Valid prediction for GlimmerHMM_glimmerT_54701-T1 Couldn't classify 23047, 24111 Sorry, prediction pasa_asmbl_34468.p1 fails validation. (GAG) AA 23047-24111 GG AGG Valid prediction for Augustus_model.g36278.t1 Valid prediction for CodingQuarry_transcript_38814-T1 Valid prediction for snap_scaffold_25-snap.1835-T1 Valid prediction for GlimmerHMM_glimmerT_54693-T1 Valid prediction for snap_scaffold_25-snap.1885-T1 Valid prediction for HiQ_model.g36292.t1 Valid prediction for snap_scaffold_25-snap.1864-T1 Valid prediction for GlimmerHMM_glimmerT_54685-T1 Valid prediction for snap_scaffold_25-snap.1863-T1 Valid prediction for Augustus_model.g36288.t1 Valid prediction for snap_scaffold_25-snap.1877-T1 Valid prediction for snap_scaffold_25-snap.1866-T1 Valid prediction for GlimmerHMM_glimmerT_54684-T1 Couldn't classify 278605, 278731 Sorry, prediction pasa_asmbl_34447.p1 fails validation. (AGG) TC 278605-278731 GT AGG (CAG) AG 280146-280543 AC AGA -recovered pasa_asmbl_34447.p1, terminal, 280146, 280543 Valid prediction for GlimmerHMM_glimmerT_54673-T1 Valid prediction for Augustus_model.g36279.t1 Valid prediction for GlimmerHMM_glimmerT_54692-T1 Valid prediction for Augustus_model.g36303.t1 Valid prediction for CodingQuarry_transcript_38812-T1 Valid prediction for GlimmerHMM_glimmerT_54661-T1 Valid prediction for snap_scaffold_25-snap.1837-T1 Valid prediction for snap_scaffold_25-snap.1893-T1 Valid prediction for HiQ_model.g36265.t1 Valid prediction for snap_scaffold_25-snap.1875-T1 Valid prediction for CodingQuarry_transcript_38809-T1 Valid prediction for GlimmerHMM_glimmerT_54663-T1 Valid prediction for snap_scaffold_25-snap.1838-T1 Valid prediction for GlimmerHMM_glimmerT_54660-T1 Valid prediction for snap_scaffold_25-snap.1842-T1 Valid prediction for snap_scaffold_25-snap.1858-T1 Valid prediction for snap_scaffold_25-snap.1852-T1 Valid prediction for GlimmerHMM_glimmerT_54677-T1 Valid prediction for snap_scaffold_25-snap.1851-T1 Valid prediction for snap_scaffold_25-snap.1896-T1 Valid prediction for Augustus_model.g36294.t1 Valid prediction for Augustus_model.g36296.t1 Valid prediction for Augustus_model.g36271.t1 Valid prediction for Augustus_model.g36301.t1 Valid prediction for snap_scaffold_25-snap.1843-T1 Valid prediction for snap_scaffold_25-snap.1859-T1 Couldn't classify 7038, 7046 Sorry, prediction pasa_asmbl_34469.p1 fails validation. (ATC) AG 7038-7046 GT AGG (CAC) AG 7163-7372 GT GGG (GTG) AG 7690-7892 GT GCG (CGT) AG 7979-8083 GT TGG (CGA) AG 8180-8317 GT AAG (AAA) AG 8427-8448 AC AGA -recovered pasa_asmbl_34469.p1, terminal, 8427, 8448 -recovered pasa_asmbl_34469.p1, internal, 7038, 7046 -recovered pasa_asmbl_34469.p1, internal, 7163, 7372 -recovered pasa_asmbl_34469.p1, internal, 7690, 7892 -recovered pasa_asmbl_34469.p1, internal, 7979, 8083 -recovered pasa_asmbl_34469.p1, internal, 8180, 8317 Valid prediction for HiQ_model.g36295.t1 Valid prediction for snap_scaffold_25-snap.1861-T1 Valid prediction for CodingQuarry_transcript_38820-T1 Valid prediction for snap_scaffold_25-snap.1845-T1 Valid prediction for GlimmerHMM_glimmerT_54676-T1 Valid prediction for GlimmerHMM_glimmerT_54666-T1 Valid prediction for HiQ_model.g36298.t1 Couldn't classify 5384, 5451 Couldn't classify 6245, 6323 Sorry, prediction pasa_asmbl_34470.p1 fails validation. (CGC) CC 5384-5451 GT CGG (GTT) AG 5580-5695 GT AGG (GTG) AG 5809-5963 GT AGG (GAC) AG 6061-6116 GT GAG (TCA) AG 6245-6323 CT AGC -recovered pasa_asmbl_34470.p1, terminal, 5580, 5695 -recovered pasa_asmbl_34470.p1, internal, 5580, 5695 -recovered pasa_asmbl_34470.p1, internal, 5809, 5963 -recovered pasa_asmbl_34470.p1, internal, 6061, 6116 Couldn't classify 241984, 241984 Sorry, prediction CodingQuarry_transcript_38813-T1 fails validation. (ATG) AG 237824-237846 GT CTG (GGT) AG 238989-239042 GT GGG (GGG) AG 240958-241011 GT AGG (GGT) AG 241166-241210 GT TAG (GGC) AG 241984-241984 GC GGG -recovered CodingQuarry_transcript_38813-T1, initial, 237824, 237846 -recovered CodingQuarry_transcript_38813-T1, internal, 237824, 237846 -recovered CodingQuarry_transcript_38813-T1, internal, 238989, 239042 -recovered CodingQuarry_transcript_38813-T1, internal, 240958, 241011 -recovered CodingQuarry_transcript_38813-T1, internal, 241166, 241210 -recovered CodingQuarry_transcript_38813-T1, internal, 241984, 241984 Valid prediction for CodingQuarry_transcript_38808-T1 Valid prediction for pasa_asmbl_34442.p2 Valid prediction for pasa_asmbl_34441.p1 Valid prediction for Augustus_model.g36274.t1 Valid prediction for Augustus_model.g36286.t1 Valid prediction for snap_scaffold_25-snap.1874-T1 Valid prediction for Augustus_model.g36273.t1 Valid prediction for snap_scaffold_25-snap.1889-T1 Valid prediction for Augustus_model.g36263.t1 Valid prediction for Augustus_model.g36280.t1 Valid prediction for GlimmerHMM_glimmerT_54675-T1 Valid prediction for GlimmerHMM_glimmerT_54699-T1 Valid prediction for snap_scaffold_25-snap.1894-T1 Couldn't classify 235796, 235849 Couldn't classify 245564, 245617 Sorry, prediction pasa_asmbl_34627.p1 fails validation. (GGT) AG 235796-235849 GT AGG (GGC) AG 236823-236876 GT GGG (GGG) AG 237793-237846 GT CTG (GGT) AG 238989-239042 GT GGG (GGG) AG 240958-241011 GT AGG (GGT) AG 241166-241210 GT TAG (GGC) AG 241984-242028 GT CAG (GGT) AG 243757-243810 GT CAG (GGG) AG 244454-244507 GT AGG (GGC) AG 244666-244719 GT AGG (GGC) AG 245013-245066 GT GAG (GGG) AG 245564-245617 GT AGG -recovered pasa_asmbl_34627.p1, internal, 235796, 235849 -recovered pasa_asmbl_34627.p1, internal, 236823, 236876 -recovered pasa_asmbl_34627.p1, internal, 237793, 237846 -recovered pasa_asmbl_34627.p1, internal, 238989, 239042 -recovered pasa_asmbl_34627.p1, internal, 240958, 241011 -recovered pasa_asmbl_34627.p1, internal, 241166, 241210 -recovered pasa_asmbl_34627.p1, internal, 241984, 242028 -recovered pasa_asmbl_34627.p1, internal, 243757, 243810 -recovered pasa_asmbl_34627.p1, internal, 244454, 244507 -recovered pasa_asmbl_34627.p1, internal, 244666, 244719 -recovered pasa_asmbl_34627.p1, internal, 245013, 245066 -recovered pasa_asmbl_34627.p1, internal, 245564, 245617 Valid prediction for CodingQuarry_transcript_38810-T1 Valid prediction for CodingQuarry_transcript_38817-T1 Valid prediction for GlimmerHMM_glimmerT_54672-T1 Valid prediction for GlimmerHMM_glimmerT_54696-T1 Valid prediction for pasa_asmbl_34463.p1 Valid prediction for GlimmerHMM_glimmerT_54703-T1 Valid prediction for Augustus_model.g36267.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 27530, rend_intergenic: 19172 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73730, rend_intergenic: 71358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85893, rend_intergenic: 81431 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123958, rend_intergenic: 122443 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142271, rend_intergenic: 136151 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202196, rend_intergenic: 200928 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 348730 -exon list size: 685 building trellis 0.1 0.3 0.4 0.6 0.7 0.9 1.0 1.2 1.3 1.5 1.6 1.7 1.9 2.0 2.2 2.3 2.5 2.6 2.8 2.9 3.1 3.2 3.3 3.5 3.6 3.8 3.9 4.1 4.2 4.4 4.5 4.7 4.8 4.9 5.1 5.2 5.4 5.5 5.7 5.8 6.0 6.1 6.3 6.4 6.6 6.7 6.8 7.0 7.1 7.3 7.4 7.6 7.7 7.9 8.0 8.2 8.3 8.4 8.6 8.7 8.9 9.0 9.2 9.3 9.5 9.6 9.8 9.9 10.0 10.2 10.3 10.5 10.6 10.8 10.9 11.1 11.2 11.4 11.5 11.6 11.8 11.9 12.1 12.2 12.4 12.5 12.7 12.8 13.0 13.1 13.2 13.4 13.5 13.7 13.8 14.0 14.1 14.3 14.4 14.6 14.7 14.8 15.0 15.1 15.3 15.4 15.6 15.7 15.9 16.0 16.2 16.3 16.4 16.6 16.7 16.9 17.0 17.2 17.3 17.5 17.6 17.8 17.9 18.0 18.2 18.3 18.5 18.6 18.8 18.9 19.1 19.2 19.4 19.5 19.7 19.8 19.9 20.1 20.2 20.4 20.5 20.7 20.8 21.0 21.1 21.3 21.4 21.5 21.7 21.8 22.0 22.1 22.3 22.4 22.6 22.7 22.9 23.0 23.1 23.3 23.4 23.6 23.7 23.9 24.0 24.2 24.3 24.5 24.6 24.7 24.9 25.0 25.2 25.3 25.5 25.6 25.8 25.9 26.1 26.2 26.3 26.5 26.6 26.8 26.9 27.1 27.2 27.4 27.5 27.7 27.8 27.9 28.1 28.2 28.4 28.5 28.7 28.8 29.0 29.1 29.3 29.4 29.5 29.7 29.8 30.0 30.1 30.3 30.4 30.6 30.7 30.9 31.0 31.1 31.3 31.4 31.6 31.7 31.9 32.0 32.2 32.3 32.5 32.6 32.8 32.9 33.0 33.2 33.3 33.5 33.6 33.8 33.9 34.1 34.2 34.4 34.5 34.6 34.8 34.9 35.1 35.2 35.4 35.5 35.7 35.8 36.0 36.1 36.2 36.4 36.5 36.7 36.8 37.0 37.1 37.3 37.4 37.6 37.7 37.8 38.0 38.1 38.3 38.4 38.6 38.7 38.9 39.0 39.2 39.3 39.4 39.6 39.7 39.9 40.0 40.2 40.3 40.5 40.6 40.8 40.9 41.0 41.2 41.3 41.5 41.6 41.8 41.9 42.1 42.2 42.4 42.5 42.6 42.8 42.9 43.1 43.2 43.4 43.5 43.7 43.8 44.0 44.1 44.3 44.4 44.5 44.7 44.8 45.0 45.1 45.3 45.4 45.6 45.7 45.9 46.0 46.1 46.3 46.4 46.6 46.7 46.9 47.0 47.2 47.3 47.5 47.6 47.7 47.9 48.0 48.2 48.3 48.5 48.6 48.8 48.9 49.1 49.2 49.3 49.5 49.6 49.8 49.9 50.1 50.2 50.4 50.5 50.7 50.8 50.9 51.1 51.2 51.4 51.5 51.7 51.8 52.0 52.1 52.3 52.4 52.5 52.7 52.8 53.0 53.1 53.3 53.4 53.6 53.7 53.9 54.0 54.1 54.3 54.4 54.6 54.7 54.9 55.0 55.2 55.3 55.5 55.6 55.7 55.9 56.0 56.2 56.3 56.5 56.6 56.8 56.9 57.1 57.2 57.4 57.5 57.6 57.8 57.9 58.1 58.2 58.4 58.5 58.7 58.8 59.0 59.1 59.2 59.4 59.5 59.7 59.8 60.0 60.1 60.3 60.4 60.6 60.7 60.8 61.0 61.1 61.3 61.4 61.6 61.7 61.9 62.0 62.2 62.3 62.4 62.6 62.7 62.9 63.0 63.2 63.3 63.5 63.6 63.8 63.9 64.0 64.2 64.3 64.5 64.6 64.8 64.9 65.1 65.2 65.4 65.5 65.6 65.8 65.9 66.1 66.2 66.4 66.5 66.7 66.8 67.0 67.1 67.2 67.4 67.5 67.7 67.8 68.0 68.1 68.3 68.4 68.6 68.7 68.9 69.0 69.1 69.3 69.4 69.6 69.7 69.9 70.0 70.2 70.3 70.5 70.6 70.7 70.9 71.0 71.2 71.3 71.5 71.6 71.8 71.9 72.1 72.2 72.3 72.5 72.6 72.8 72.9 73.1 73.2 73.4 73.5 73.7 73.8 73.9 74.1 74.2 74.4 74.5 74.7 74.8 75.0 75.1 75.3 75.4 75.5 75.7 75.8 76.0 76.1 76.3 76.4 76.6 76.7 76.9 77.0 77.1 77.3 77.4 77.6 77.7 77.9 78.0 78.2 78.3 78.5 78.6 78.7 78.9 79.0 79.2 79.3 79.5 79.6 79.8 79.9 80.1 80.2 80.3 80.5 80.6 80.8 80.9 81.1 81.2 81.4 81.5 81.7 81.8 82.0 82.1 82.2 82.4 82.5 82.7 82.8 83.0 83.1 83.3 83.4 83.6 83.7 83.8 84.0 84.1 84.3 84.4 84.6 84.7 84.9 85.0 85.2 85.3 85.4 85.6 85.7 85.9 86.0 86.2 86.3 86.5 86.6 86.8 86.9 87.0 87.2 87.3 87.5 87.6 87.8 87.9 88.1 88.2 88.4 88.5 88.6 88.8 88.9 89.1 89.2 89.4 89.5 89.7 89.8 90.0 90.1 90.2 90.4 90.5 90.7 90.8 91.0 91.1 91.3 91.4 91.6 91.7 91.8 92.0 92.1 92.3 92.4 92.6 92.7 92.9 93.0 93.2 93.3 93.4 93.6 93.7 93.9 94.0 94.2 94.3 94.5 94.6 94.8 94.9 95.1 95.2 95.3 95.5 95.6 95.8 95.9 96.1 96.2 96.4 96.5 96.7 96.8 96.9 97.1 97.2 97.4 97.5 97.7 97.8 98.0 98.1 98.3 98.4 98.5 98.7 98.8 99.0 99.1 99.3 99.4 99.6 99.7 99.9 -found 55 predictions from path traversal Error with prediction: snap lend_intergenic: 27530, rend_intergenic: 19172 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73730, rend_intergenic: 71358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85893, rend_intergenic: 81431 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123958, rend_intergenic: 122443 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142271, rend_intergenic: 136151 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202196, rend_intergenic: 200928 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 49 predictions persist after filtering for low support