-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2430

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1135, 1285
Sorry, prediction snap_scaffold_2430-snap.1-T1 fails validation.
(ATG)	 CC	10-249	GT	AGG
(CAC)	 AG	1135-1285	GT	GAG
-recovered snap_scaffold_2430-snap.1-T1, initial, 10, 249
-recovered snap_scaffold_2430-snap.1-T1, internal, 1135, 1285
Couldn't classify 1, 249
Couldn't classify 1135, 1297
Sorry, prediction Augustus_model.g40888.t1 fails validation.
(GCT)	 CT	1-249	GT	AGG
(CAC)	 AG	1135-1297		CT
Couldn't classify 1135, 1285
Sorry, prediction GlimmerHMM_glimmerT_61604-T1 fails validation.
(ATG)	 CC	37-249	GT	AGG
(CAC)	 AG	1135-1285	GT	GAG
-recovered GlimmerHMM_glimmerT_61604-T1, initial, 37, 249
-recovered GlimmerHMM_glimmerT_61604-T1, internal, 1135, 1285

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 41, 133
Couldn't classify 1067, 1255
Sorry, prediction snap_scaffold_2430-snap.2-T1 fails validation.
(CAG)	 AG	41-133	GT	TGG
(AGC)	 AG	143-334	GT	AGG
(CTG)	 AG	1067-1255	GT	AGG
-recovered snap_scaffold_2430-snap.2-T1, internal, 41, 133
-recovered snap_scaffold_2430-snap.2-T1, internal, 143, 334
-recovered snap_scaffold_2430-snap.2-T1, internal, 1067, 1255
Sorry, intron length (8) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 1285, rend_intergenic: 43  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 1297
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 1285, rend_intergenic: 43  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support