-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_24/scaffold_24_1072915-1342546

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 92179, 92293
Couldn't classify 94231, 94241
Sorry, prediction pasa_asmbl_32069.p1 fails validation.
(GGG)	 CG	92179-92293	GT	GGG
(CAG)	 AG	92536-92601	GT	GGG
(ACA)	 AG	93911-94036	GT	TGG
(ATA)	 AG	94231-94241	TG	AGT
-recovered pasa_asmbl_32069.p1, internal, 92536, 92601
-recovered pasa_asmbl_32069.p1, internal, 93911, 94036
Valid prediction for Augustus_model.g34658.t1
Valid prediction for snap_scaffold_24-snap.298-T1
Couldn't classify 96383, 96398
Couldn't classify 100438, 100547
Sorry, prediction pasa_asmbl_32070.p1 fails validation.
(GGG)	 CT	96383-96398	GT	CGG
(ATA)	 AG	99121-99327	GT	AGG
(ACA)	 AG	99691-99816	GT	TGG
(ACA)	 AG	100438-100547	AA	GCA
-recovered pasa_asmbl_32070.p1, internal, 99121, 99327
-recovered pasa_asmbl_32070.p1, internal, 99691, 99816
Valid prediction for snap_scaffold_24-snap.287-T1
Valid prediction for GlimmerHMM_glimmerT_52001-T1
Valid prediction for snap_scaffold_24-snap.304-T1
Valid prediction for snap_scaffold_24-snap.310-T1
Valid prediction for snap_scaffold_24-snap.290-T1
Valid prediction for snap_scaffold_24-snap.313-T1
Valid prediction for snap_scaffold_24-snap.293-T1
Valid prediction for snap_scaffold_24-snap.315-T1
Valid prediction for HiQ_model.g34659.t1
Valid prediction for snap_scaffold_24-snap.311-T1
Valid prediction for GlimmerHMM_glimmerT_51997-T1
Couldn't classify 266691, 266742
Sorry, prediction pasa_asmbl_32072.p1 fails validation.
(ATG)	 CC	265421-265454	GT	GGG
(ATT)	 AG	265620-265683	GT	GGG
(CGG)	 AG	265928-266035	GT	CGG
(CAC)	 AG	266195-266302	GT	AAG
(GCT)	 AG	266691-266742	GA	ATG
-recovered pasa_asmbl_32072.p1, initial, 265421, 265454
-recovered pasa_asmbl_32072.p1, internal, 265620, 265683
-recovered pasa_asmbl_32072.p1, internal, 265928, 266035
-recovered pasa_asmbl_32072.p1, internal, 266195, 266302
Valid prediction for Augustus_model.g34656.t1
Valid prediction for CodingQuarry_transcript_37232-T1
Valid prediction for GlimmerHMM_glimmerT_51976-T1
Valid prediction for GlimmerHMM_glimmerT_51994-T1
Valid prediction for snap_scaffold_24-snap.305-T1
Valid prediction for snap_scaffold_24-snap.308-T1
Valid prediction for snap_scaffold_24-snap.292-T1
Valid prediction for snap_scaffold_24-snap.288-T1
Valid prediction for snap_scaffold_24-snap.321-T1
Valid prediction for snap_scaffold_24-snap.324-T1
Valid prediction for snap_scaffold_24-snap.301-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for pasa_asmbl_32066.p1
Valid prediction for HiQ_model.g34644.t1
Valid prediction for GlimmerHMM_glimmerT_51987-T1
Valid prediction for GlimmerHMM_glimmerT_52003-T1
Valid prediction for GlimmerHMM_glimmerT_51998-T1
Valid prediction for GlimmerHMM_glimmerT_51991-T1
Valid prediction for GlimmerHMM_glimmerT_51978-T1
Valid prediction for GlimmerHMM_glimmerT_51981-T1
Valid prediction for snap_scaffold_24-snap.273-T1
Valid prediction for GlimmerHMM_glimmerT_52000-T1
Valid prediction for GlimmerHMM_glimmerT_51995-T1
Valid prediction for snap_scaffold_24-snap.295-T1
Valid prediction for snap_scaffold_24-snap.269-T1
Valid prediction for snap_scaffold_24-snap.319-T1
Valid prediction for snap_scaffold_24-snap.270-T1
Valid prediction for Augustus_model.g34649.t1
Valid prediction for snap_scaffold_24-snap.320-T1
Valid prediction for snap_scaffold_24-snap.303-T1
Valid prediction for snap_scaffold_24-snap.279-T1
Valid prediction for CodingQuarry_transcript_37230-T1
Valid prediction for snap_scaffold_24-snap.285-T1
Valid prediction for snap_scaffold_24-snap.296-T1
Valid prediction for snap_scaffold_24-snap.272-T1
Valid prediction for snap_scaffold_24-snap.276-T1
Valid prediction for snap_scaffold_24-snap.307-T1
Valid prediction for GlimmerHMM_glimmerT_51983-T1
Valid prediction for snap_scaffold_24-snap.318-T1
Valid prediction for snap_scaffold_24-snap.282-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_51999-T1
Valid prediction for Augustus_model.g34654.t1
Valid prediction for snap_scaffold_24-snap.289-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for snap_scaffold_24-snap.291-T1
Valid prediction for snap_scaffold_24-snap.306-T1
Valid prediction for snap_scaffold_24-snap.302-T1
Valid prediction for GlimmerHMM_glimmerT_51977-T1
Valid prediction for Augustus_model.g34650.t1
Valid prediction for Augustus_model.g34647.t1
Valid prediction for snap_scaffold_24-snap.277-T1
Valid prediction for GlimmerHMM_glimmerT_51993-T1
Valid prediction for HiQ_model.g34651.t1
Valid prediction for snap_scaffold_24-snap.294-T1
Valid prediction for snap_scaffold_24-snap.275-T1
Valid prediction for snap_scaffold_24-snap.317-T1
Valid prediction for GlimmerHMM_glimmerT_52002-T1
Couldn't classify 110711, 110771
Sorry, prediction CodingQuarry_transcript_37233-T1 fails validation.
(ATG)	 AG	107743-107819	GT	GGG
(TGA)	 AG	108437-108618	GT	AGG
(TGG)	 AG	110711-110771	AC	GGA
(GGT)	 AG	111635-111728	GT	AGG
(GAC)	 AG	112163-112468	GT	ACG
(CTG)	 AG	112696-112849	GT	CTG
(CCA)	 AG	112950-112999	GT	TGG
(GAT)	 AG	113097-113157	GT	TCG
(GAG)	 AG	113350-113484	GT	AGG
(GAA)	 AG	113686-113727	GT	AGG
(GGA)	 AG	113839-113925	GT	CGG
(ATA)	 AG	114019-114120	GT	GGG
(GTA)	 AG	114218-114846	GT	ACG
(CTG)	 AG	115049-115100	GT	CGG
(GGA)	 AG	115465-115628	TC	GAT
-recovered CodingQuarry_transcript_37233-T1, initial, 107743, 107819
-recovered CodingQuarry_transcript_37233-T1, terminal, 115465, 115628
-recovered CodingQuarry_transcript_37233-T1, internal, 107743, 107819
-recovered CodingQuarry_transcript_37233-T1, internal, 108437, 108618
-recovered CodingQuarry_transcript_37233-T1, internal, 111635, 111728
-recovered CodingQuarry_transcript_37233-T1, internal, 112163, 112468
-recovered CodingQuarry_transcript_37233-T1, internal, 112696, 112849
-recovered CodingQuarry_transcript_37233-T1, internal, 112950, 112999
-recovered CodingQuarry_transcript_37233-T1, internal, 113097, 113157
-recovered CodingQuarry_transcript_37233-T1, internal, 113350, 113484
-recovered CodingQuarry_transcript_37233-T1, internal, 113686, 113727
-recovered CodingQuarry_transcript_37233-T1, internal, 113839, 113925
-recovered CodingQuarry_transcript_37233-T1, internal, 114019, 114120
-recovered CodingQuarry_transcript_37233-T1, internal, 114218, 114846
-recovered CodingQuarry_transcript_37233-T1, internal, 115049, 115100
Valid prediction for GlimmerHMM_glimmerT_51980-T1
Valid prediction for snap_scaffold_24-snap.283-T1
Valid prediction for Augustus_model.g34655.t1
Valid prediction for Augustus_model.g34657.t1
Valid prediction for snap_scaffold_24-snap.284-T1
Valid prediction for snap_scaffold_24-snap.297-T1
Valid prediction for GlimmerHMM_glimmerT_51986-T1
Valid prediction for snap_scaffold_24-snap.271-T1
Valid prediction for GlimmerHMM_glimmerT_51990-T1
Valid prediction for snap_scaffold_24-snap.316-T1
Valid prediction for snap_scaffold_24-snap.281-T1
Valid prediction for Augustus_model.g34653.t1
Valid prediction for GlimmerHMM_glimmerT_51979-T1
Valid prediction for snap_scaffold_24-snap.309-T1
Valid prediction for snap_scaffold_24-snap.314-T1
Valid prediction for snap_scaffold_24-snap.278-T1
Valid prediction for snap_scaffold_24-snap.299-T1
Valid prediction for Augustus_model.g34646.t1
Valid prediction for GlimmerHMM_glimmerT_51982-T1
Valid prediction for HiQ_model.g34652.t1
Valid prediction for pasa_asmbl_32718.p1
Valid prediction for GlimmerHMM_glimmerT_51984-T1
Valid prediction for Augustus_model.g34648.t1
Valid prediction for GlimmerHMM_glimmerT_51988-T1
Valid prediction for snap_scaffold_24-snap.280-T1
Valid prediction for GlimmerHMM_glimmerT_51989-T1
Valid prediction for GlimmerHMM_glimmerT_51992-T1
Valid prediction for snap_scaffold_24-snap.274-T1
Valid prediction for snap_scaffold_24-snap.322-T1
Valid prediction for Augustus_model.g34645.t1
Valid prediction for snap_scaffold_24-snap.323-T1
Valid prediction for snap_scaffold_24-snap.312-T1
Valid prediction for GlimmerHMM_glimmerT_51996-T1
Valid prediction for snap_scaffold_24-snap.300-T1
Valid prediction for GlimmerHMM_glimmerT_51985-T1
Valid prediction for snap_scaffold_24-snap.286-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11137, rend_intergenic: 8619  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23220, rend_intergenic: 12079  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33841, rend_intergenic: 28919  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36675, rend_intergenic: 33944  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41276, rend_intergenic: 36760  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47091, rend_intergenic: 44491  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56708, rend_intergenic: 47227  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57623, rend_intergenic: 56952  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92621, rend_intergenic: 57747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100643, rend_intergenic: 93913  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102298, rend_intergenic: 101110  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103294, rend_intergenic: 102526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115744, rend_intergenic: 107913  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123527, rend_intergenic: 116118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131803, rend_intergenic: 124716  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133313, rend_intergenic: 131837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142558, rend_intergenic: 134308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145605, rend_intergenic: 143678  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150094, rend_intergenic: 146073  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168672, rend_intergenic: 166292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192282, rend_intergenic: 170750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199427, rend_intergenic: 192617  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201642, rend_intergenic: 199542  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209599, rend_intergenic: 202409  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223434, rend_intergenic: 212939  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233099, rend_intergenic: 231106  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 257480, rend_intergenic: 234393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 264104, rend_intergenic: 261462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 267156, rend_intergenic: 265421  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 269632
-exon list size: 537


building trellis

0.2    
0.4    
0.6    
0.7    
0.9    
1.1    
1.3    
1.5    
1.7    
1.9    
2.0    
2.2    
2.4    
2.6    
2.8    
3.0    
3.2    
3.3    
3.5    
3.7    
3.9    
4.1    
4.3    
4.5    
4.6    
4.8    
5.0    
5.2    
5.4    
5.6    
5.8    
5.9    
6.1    
6.3    
6.5    
6.7    
6.9    
7.1    
7.2    
7.4    
7.6    
7.8    
8.0    
8.2    
8.3    
8.5    
8.7    
8.9    
9.1    
9.3    
9.5    
9.6    
9.8    
10.0    
10.2    
10.4    
10.6    
10.8    
10.9    
11.1    
11.3    
11.5    
11.7    
11.9    
12.1    
12.2    
12.4    
12.6    
12.8    
13.0    
13.2    
13.4    
13.5    
13.7    
13.9    
14.1    
14.3    
14.5    
14.7    
14.8    
15.0    
15.2    
15.4    
15.6    
15.8    
16.0    
16.1    
16.3    
16.5    
16.7    
16.9    
17.1    
17.3    
17.4    
17.6    
17.8    
18.0    
18.2    
18.4    
18.6    
18.7    
18.9    
19.1    
19.3    
19.5    
19.7    
19.9    
20.0    
20.2    
20.4    
20.6    
20.8    
21.0    
21.2    
21.3    
21.5    
21.7    
21.9    
22.1    
22.3    
22.4    
22.6    
22.8    
23.0    
23.2    
23.4    
23.6    
23.7    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.0    
25.2    
25.4    
25.6    
25.8    
26.0    
26.2    
26.3    
26.5    
26.7    
26.9    
27.1    
27.3    
27.5    
27.6    
27.8    
28.0    
28.2    
28.4    
28.6    
28.8    
28.9    
29.1    
29.3    
29.5    
29.7    
29.9    
30.1    
30.2    
30.4    
30.6    
30.8    
31.0    
31.2    
31.4    
31.5    
31.7    
31.9    
32.1    
32.3    
32.5    
32.7    
32.8    
33.0    
33.2    
33.4    
33.6    
33.8    
34.0    
34.1    
34.3    
34.5    
34.7    
34.9    
35.1    
35.3    
35.4    
35.6    
35.8    
36.0    
36.2    
36.4    
36.5    
36.7    
36.9    
37.1    
37.3    
37.5    
37.7    
37.8    
38.0    
38.2    
38.4    
38.6    
38.8    
39.0    
39.1    
39.3    
39.5    
39.7    
39.9    
40.1    
40.3    
40.4    
40.6    
40.8    
41.0    
41.2    
41.4    
41.6    
41.7    
41.9    
42.1    
42.3    
42.5    
42.7    
42.9    
43.0    
43.2    
43.4    
43.6    
43.8    
44.0    
44.2    
44.3    
44.5    
44.7    
44.9    
45.1    
45.3    
45.5    
45.6    
45.8    
46.0    
46.2    
46.4    
46.6    
46.8    
46.9    
47.1    
47.3    
47.5    
47.7    
47.9    
48.1    
48.2    
48.4    
48.6    
48.8    
49.0    
49.2    
49.4    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.6    
50.8    
51.0    
51.2    
51.4    
51.6    
51.8    
51.9    
52.1    
52.3    
52.5    
52.7    
52.9    
53.1    
53.2    
53.4    
53.6    
53.8    
54.0    
54.2    
54.4    
54.5    
54.7    
54.9    
55.1    
55.3    
55.5    
55.7    
55.8    
56.0    
56.2    
56.4    
56.6    
56.8    
57.0    
57.1    
57.3    
57.5    
57.7    
57.9    
58.1    
58.3    
58.4    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.7    
59.9    
60.1    
60.3    
60.5    
60.7    
60.9    
61.0    
61.2    
61.4    
61.6    
61.8    
62.0    
62.2    
62.3    
62.5    
62.7    
62.9    
63.1    
63.3    
63.5    
63.6    
63.8    
64.0    
64.2    
64.4    
64.6    
64.7    
64.9    
65.1    
65.3    
65.5    
65.7    
65.9    
66.0    
66.2    
66.4    
66.6    
66.8    
67.0    
67.2    
67.3    
67.5    
67.7    
67.9    
68.1    
68.3    
68.5    
68.6    
68.8    
69.0    
69.2    
69.4    
69.6    
69.8    
69.9    
70.1    
70.3    
70.5    
70.7    
70.9    
71.1    
71.2    
71.4    
71.6    
71.8    
72.0    
72.2    
72.4    
72.5    
72.7    
72.9    
73.1    
73.3    
73.5    
73.7    
73.8    
74.0    
74.2    
74.4    
74.6    
74.8    
75.0    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.4    
76.6    
76.8    
77.0    
77.2    
77.4    
77.6    
77.7    
77.9    
78.1    
78.3    
78.5    
78.7    
78.8    
79.0    
79.2    
79.4    
79.6    
79.8    
80.0    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.3    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.7    
82.9    
83.1    
83.3    
83.5    
83.7    
83.9    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.3    
85.5    
85.7    
85.9    
86.1    
86.3    
86.5    
86.6    
86.8    
87.0    
87.2    
87.4    
87.6    
87.8    
87.9    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.2    
89.4    
89.6    
89.8    
90.0    
90.2    
90.4    
90.5    
90.7    
90.9    
91.1    
91.3    
91.5    
91.7    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
92.9    
93.1    
93.3    
93.5    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.8    
95.0    
95.2    
95.4    
95.5    
95.7    
95.9    
96.1    
96.3    
96.5    
96.7    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.7    
98.9    
99.1    
99.3    
99.4    
99.6    
99.8    
-found 27 predictions from path traversal
Error with prediction: snap lend_intergenic: 11137, rend_intergenic: 8619  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23220, rend_intergenic: 12079  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33841, rend_intergenic: 28919  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36675, rend_intergenic: 33944  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41276, rend_intergenic: 36760  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47091, rend_intergenic: 44491  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56708, rend_intergenic: 47227  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57623, rend_intergenic: 56952  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92621, rend_intergenic: 57747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100643, rend_intergenic: 93913  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102298, rend_intergenic: 101110  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103294, rend_intergenic: 102526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115744, rend_intergenic: 107913  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123527, rend_intergenic: 116118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131803, rend_intergenic: 124716  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133313, rend_intergenic: 131837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142558, rend_intergenic: 134308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145605, rend_intergenic: 143678  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150094, rend_intergenic: 146073  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168672, rend_intergenic: 166292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192282, rend_intergenic: 170750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199427, rend_intergenic: 192617  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201642, rend_intergenic: 199542  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209599, rend_intergenic: 202409  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223434, rend_intergenic: 212939  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233099, rend_intergenic: 231106  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 257480, rend_intergenic: 234393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 264104, rend_intergenic: 261462  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 267156, rend_intergenic: 265421  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 16 predictions persist after filtering for low support