-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2333

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g40855.t1
Couldn't classify 1148, 1277
Sorry, prediction snap_scaffold_2333-snap.1-T1 fails validation.
(ATG)	 AC	136-171	GT	TGG
(GCC)	 AG	1014-1065	GT	TGG
(CGT)	 AG	1148-1277	GT	GCG
-recovered snap_scaffold_2333-snap.1-T1, initial, 136, 171
-recovered snap_scaffold_2333-snap.1-T1, internal, 1014, 1065
-recovered snap_scaffold_2333-snap.1-T1, internal, 1148, 1277

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1375
-exon list size: 8


building trellis

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-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support