-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_23/scaffold_23_4149189-4469241 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_50904-T1 Valid prediction for Augustus_model.g34017.t1 Valid prediction for snap_scaffold_23-snap.816-T1 Valid prediction for Augustus_model.g34046.t1 Valid prediction for snap_scaffold_23-snap.829-T1 Valid prediction for HiQ_model.g34014.t1 Valid prediction for HiQ_model.g34031.t1 Valid prediction for GlimmerHMM_glimmerT_50905-T1 Valid prediction for pasa_asmbl_31490.p1 Couldn't classify 274169, 274324 Sorry, prediction pasa_asmbl_31506.p1 fails validation. (TTT) GC 274169-274324 GT AGG (CTG) AG 274968-275093 GC AGG (GAG) AG 276145-276315 GT AGG (CTG) AG 276700-276825 GT AGG (ACA) AG 278117-278337 GT AGG (ACT) AG 278651-278879 GT AGG (GAC) AG 279093-279197 GT CGG (CTG) AG 279310-279429 GT AGG (GAA) AG 281229-281339 GT AGG (GGA) AG 282463-282504 TC AAT -recovered pasa_asmbl_31506.p1, terminal, 282463, 282504 -recovered pasa_asmbl_31506.p1, internal, 274968, 275093 -recovered pasa_asmbl_31506.p1, internal, 276145, 276315 -recovered pasa_asmbl_31506.p1, internal, 276700, 276825 -recovered pasa_asmbl_31506.p1, internal, 278117, 278337 -recovered pasa_asmbl_31506.p1, internal, 278651, 278879 -recovered pasa_asmbl_31506.p1, internal, 279093, 279197 -recovered pasa_asmbl_31506.p1, internal, 279310, 279429 -recovered pasa_asmbl_31506.p1, internal, 281229, 281339 Couldn't classify 9387, 9434 Sorry, prediction pasa_asmbl_31487.p1 fails validation. (CTA) GA 9387-9434 GT CGG (ACT) AG 9558-9638 GT AGG (AAT) AG 9806-9917 GT CAG (GTA) AG 10126-10409 GG GAG -recovered pasa_asmbl_31487.p1, terminal, 10126, 10409 -recovered pasa_asmbl_31487.p1, internal, 9558, 9638 -recovered pasa_asmbl_31487.p1, internal, 9806, 9917 Valid prediction for snap_scaffold_23-snap.840-T1 Valid prediction for snap_scaffold_23-snap.815-T1 Valid prediction for GlimmerHMM_glimmerT_50913-T1 Valid prediction for Augustus_model.g34043.t1 Valid prediction for CodingQuarry_transcript_35626-T1 Valid prediction for snap_scaffold_23-snap.801-T1 Valid prediction for GlimmerHMM_glimmerT_50919-T1 Valid prediction for GlimmerHMM_glimmerT_50923-T1 Valid prediction for GlimmerHMM_glimmerT_50912-T1 Valid prediction for Augustus_model.g34037.t1 Valid prediction for snap_scaffold_23-snap.825-T1 Valid prediction for snap_scaffold_23-snap.819-T1 Valid prediction for HiQ_model.g34026.t1 Valid prediction for snap_scaffold_23-snap.820-T1 Valid prediction for HiQ_model.g34039.t1 Valid prediction for Augustus_model.g34030.t1 Valid prediction for pasa_asmbl_31504.p1 Valid prediction for Augustus_model.g34033.t1 Valid prediction for Augustus_model.g34019.t1 Valid prediction for Augustus_model.g34027.t1 Valid prediction for snap_scaffold_23-snap.800-T1 Valid prediction for snap_scaffold_23-snap.803-T1 Valid prediction for snap_scaffold_23-snap.838-T1 Valid prediction for GlimmerHMM_glimmerT_50916-T1 Valid prediction for snap_scaffold_23-snap.797-T1 Valid prediction for snap_scaffold_23-snap.821-T1 Valid prediction for GlimmerHMM_glimmerT_50931-T1 Valid prediction for snap_scaffold_23-snap.799-T1 Valid prediction for GlimmerHMM_glimmerT_50929-T1 Valid prediction for snap_scaffold_23-snap.805-T1 Valid prediction for GlimmerHMM_glimmerT_50935-T1 Valid prediction for snap_scaffold_23-snap.812-T1 Valid prediction for snap_scaffold_23-snap.808-T1 Valid prediction for HiQ_model.g34016.t1 Valid prediction for GlimmerHMM_glimmerT_50926-T1 Valid prediction for GlimmerHMM_glimmerT_50917-T1 Valid prediction for GlimmerHMM_glimmerT_50907-T1 Valid prediction for GlimmerHMM_glimmerT_50921-T1 Valid prediction for GlimmerHMM_glimmerT_50933-T1 Valid prediction for CodingQuarry_transcript_35624-T1 Valid prediction for GlimmerHMM_glimmerT_50902-T1 Valid prediction for snap_scaffold_23-snap.818-T1 Valid prediction for snap_scaffold_23-snap.827-T1 Valid prediction for pasa_asmbl_31499.p1 Valid prediction for GlimmerHMM_glimmerT_50924-T1 Valid prediction for snap_scaffold_23-snap.842-T1 Valid prediction for Augustus_model.g34035.t1 Valid prediction for GlimmerHMM_glimmerT_50914-T1 Valid prediction for Augustus_model.g34029.t1 Valid prediction for pasa_asmbl_31970.p1 Valid prediction for snap_scaffold_23-snap.841-T1 Valid prediction for snap_scaffold_23-snap.817-T1 Valid prediction for snap_scaffold_23-snap.835-T1 Valid prediction for snap_scaffold_23-snap.824-T1 Valid prediction for GlimmerHMM_glimmerT_50927-T1 Valid prediction for snap_scaffold_23-snap.823-T1 Valid prediction for CodingQuarry_transcript_35632-T1 Valid prediction for Augustus_model.g34025.t1 Valid prediction for HiQ_model.g34041.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_35637-T1 Valid prediction for HiQ_model.g34021.t1 Valid prediction for snap_scaffold_23-snap.807-T1 Valid prediction for snap_scaffold_23-snap.826-T1 Valid prediction for snap_scaffold_23-snap.843-T1 Valid prediction for GlimmerHMM_glimmerT_50911-T1 Valid prediction for Augustus_model.g34024.t1 Valid prediction for CodingQuarry_transcript_35630-T1 Couldn't classify 288873, 288953 Sorry, prediction pasa_asmbl_30842.p1 fails validation. (ACT) AA 288873-288953 GT TGG (GCA) AG 289523-289600 GT AGG (TTC) AG 289956-290069 GT AGG (GTG) AG 290361-290490 GT AGG (GCG) AG 290587-290648 AA AAA -recovered pasa_asmbl_30842.p1, terminal, 290587, 290648 -recovered pasa_asmbl_30842.p1, internal, 289523, 289600 -recovered pasa_asmbl_30842.p1, internal, 289956, 290069 -recovered pasa_asmbl_30842.p1, internal, 290361, 290490 Couldn't classify 277712, 277828 Sorry, prediction pasa_asmbl_31263.p1 fails validation. (TAT) AG 277712-277828 GT AGG (GAA) AG 278157-278381 TG GAT -recovered pasa_asmbl_31263.p1, terminal, 278157, 278381 -recovered pasa_asmbl_31263.p1, internal, 277712, 277828 Valid prediction for Augustus_model.g34020.t1 Valid prediction for HiQ_model.g34013.t1 Valid prediction for GlimmerHMM_glimmerT_50918-T1 Valid prediction for CodingQuarry_transcript_35634-T1 Valid prediction for GlimmerHMM_glimmerT_50934-T1 Valid prediction for pasa_asmbl_30859.p1 Valid prediction for snap_scaffold_23-snap.802-T1 Valid prediction for Augustus_model.g34036.t1 Valid prediction for Augustus_model.g34044.t1 Valid prediction for HiQ_model.g34023.t1 Valid prediction for CodingQuarry_transcript_35639-T1 Valid prediction for GlimmerHMM_glimmerT_50932-T1 Valid prediction for HiQ_model.g34045.t1 Valid prediction for CodingQuarry_transcript_35629-T1 Couldn't classify 236933, 237025 Sorry, prediction pasa_asmbl_30848.p1 fails validation. (TGG) AC 236933-237025 GT AGG (TTT) AG 237377-237452 GT AGG (CTC) AG 239535-239578 GT AGG (CAT) AG 240921-240983 GT AGG (GTG) AG 241366-241554 GT AGG (CTG) AG 241730-241825 GT AGG (ACA) AG 241958-242018 GT TAG (CTC) AG 242128-242211 GT AGG (CCA) AG 242350-242531 CT AGC -recovered pasa_asmbl_30848.p1, terminal, 242350, 242531 -recovered pasa_asmbl_30848.p1, internal, 237377, 237452 -recovered pasa_asmbl_30848.p1, internal, 239535, 239578 -recovered pasa_asmbl_30848.p1, internal, 240921, 240983 -recovered pasa_asmbl_30848.p1, internal, 241366, 241554 -recovered pasa_asmbl_30848.p1, internal, 241730, 241825 -recovered pasa_asmbl_30848.p1, internal, 241958, 242018 -recovered pasa_asmbl_30848.p1, internal, 242128, 242211 Valid prediction for GlimmerHMM_glimmerT_50930-T1 Valid prediction for GlimmerHMM_glimmerT_50920-T1 Valid prediction for GlimmerHMM_glimmerT_50925-T1 Valid prediction for CodingQuarry_transcript_35628-T1 Valid prediction for GlimmerHMM_glimmerT_50922-T1 Couldn't classify 91511, 91588 Couldn't classify 91800, 92063 Sorry, prediction CodingQuarry_transcript_35636-T1 fails validation. (ATG) TG 91511-91588 GG AAG (AGA) CC 91800-92063 GT AGG (GAA) AG 92200-92389 GT TGG (ATA) AG 92661-92719 GT AGG (GAT) AG 93082-93276 AA AGA -recovered CodingQuarry_transcript_35636-T1, terminal, 93082, 93276 -recovered CodingQuarry_transcript_35636-T1, internal, 92200, 92389 -recovered CodingQuarry_transcript_35636-T1, internal, 92661, 92719 Valid prediction for pasa_asmbl_30838.p1 Valid prediction for CodingQuarry_transcript_35638-T1 Valid prediction for GlimmerHMM_glimmerT_50910-T1 Valid prediction for snap_scaffold_23-snap.811-T1 Valid prediction for GlimmerHMM_glimmerT_50909-T1 Valid prediction for snap_scaffold_23-snap.844-T1 Valid prediction for snap_scaffold_23-snap.832-T1 Valid prediction for snap_scaffold_23-snap.830-T1 Valid prediction for CodingQuarry_transcript_35633-T1 Valid prediction for snap_scaffold_23-snap.837-T1 Valid prediction for GlimmerHMM_glimmerT_50906-T1 Valid prediction for HiQ_model.g34038.t1 Couldn't classify 304286, 304312 Sorry, prediction pasa_asmbl_30839.p1 fails validation. (GAT) GA 304286-304312 GT CTG (TTT) AG 304458-304661 GT AGG (TAT) AG 305019-305084 GT TGG (GTG) AG 305218-305316 GT TAG (TTG) AG 306166-306333 GT AGG (GAC) AG 306414-306496 GT AGG (GTG) AG 306802-306920 GT CGG (GCC) AG 307077-307180 GT AGG (GCG) AG 307267-307368 GT TGG (GCG) AG 307473-307583 GT CTG (CAA) AG 307742-307849 GT AGG (TCA) AG 308001-308153 CC AAC -recovered pasa_asmbl_30839.p1, terminal, 308001, 308153 -recovered pasa_asmbl_30839.p1, internal, 304458, 304661 -recovered pasa_asmbl_30839.p1, internal, 305019, 305084 -recovered pasa_asmbl_30839.p1, internal, 305218, 305316 -recovered pasa_asmbl_30839.p1, internal, 306166, 306333 -recovered pasa_asmbl_30839.p1, internal, 306414, 306496 -recovered pasa_asmbl_30839.p1, internal, 306802, 306920 -recovered pasa_asmbl_30839.p1, internal, 307077, 307180 -recovered pasa_asmbl_30839.p1, internal, 307267, 307368 -recovered pasa_asmbl_30839.p1, internal, 307473, 307583 -recovered pasa_asmbl_30839.p1, internal, 307742, 307849 Valid prediction for snap_scaffold_23-snap.814-T1 Couldn't classify 91511, 91588 Couldn't classify 91800, 92063 Couldn't classify 92661, 92718 Couldn't classify 93080, 93086 Sorry, prediction CodingQuarry_transcript_35635-T1 fails validation. (ATG) TG 91511-91588 GG AAG (AGA) CC 91800-92063 GT AGG (GAA) AG 92200-92389 GT TGG (ATA) AG 92661-92718 GG GAG (AGG) TT 93080-93086 TG GAT -recovered CodingQuarry_transcript_35635-T1, internal, 92200, 92389 Valid prediction for snap_scaffold_23-snap.809-T1 Valid prediction for GlimmerHMM_glimmerT_50908-T1 Valid prediction for HiQ_model.g34015.t1 Valid prediction for Augustus_model.g34028.t1 Valid prediction for HiQ_model.g34018.t1 Couldn't classify 230605, 230646 Sorry, prediction pasa_asmbl_30855.p1 fails validation. (GTA) CG 230605-230646 GT CCG (GAC) AG 231303-231407 GT AGG (ATG) AG 231607-231757 GT AGG (TGA) AG 232071-232151 GT AGG (ATG) AG 232277-232439 GT GGG (CGT) AG 232538-232643 GT AGG (GTG) AG 233302-233478 GT TGG (GTG) AG 233602-233760 AA AAA -recovered pasa_asmbl_30855.p1, initial, 231607, 231757 add_exon() Sorry, pasa_asmbl_30855.p1 232277-232439-initial-1 is invalid. -recovered pasa_asmbl_30855.p1, initial, 232277, 232439 -recovered pasa_asmbl_30855.p1, terminal, 233602, 233760 -recovered pasa_asmbl_30855.p1, internal, 231303, 231407 -recovered pasa_asmbl_30855.p1, internal, 231607, 231757 -recovered pasa_asmbl_30855.p1, internal, 232071, 232151 -recovered pasa_asmbl_30855.p1, internal, 232277, 232439 -recovered pasa_asmbl_30855.p1, internal, 232538, 232643 -recovered pasa_asmbl_30855.p1, internal, 233302, 233478 Couldn't classify 91381, 91589 Sorry, prediction pasa_asmbl_30861.p1 fails validation. (AGC) AC 91381-91589 GT AGG (AAT) AG 91802-92063 GT AGG (GAA) AG 92200-92389 GT TGG (ATA) AG 92661-92719 GT AGG (GAT) AG 93082-93276 AA AGA -recovered pasa_asmbl_30861.p1, terminal, 93082, 93276 -recovered pasa_asmbl_30861.p1, internal, 91802, 92063 -recovered pasa_asmbl_30861.p1, internal, 92200, 92389 -recovered pasa_asmbl_30861.p1, internal, 92661, 92719 Valid prediction for Augustus_model.g34042.t1 Valid prediction for GlimmerHMM_glimmerT_50901-T1 Valid prediction for Augustus_model.g34034.t1 Valid prediction for Augustus_model.g34040.t1 Valid prediction for snap_scaffold_23-snap.845-T1 Valid prediction for GlimmerHMM_glimmerT_50903-T1 Valid prediction for snap_scaffold_23-snap.831-T1 Valid prediction for snap_scaffold_23-snap.810-T1 Valid prediction for snap_scaffold_23-snap.822-T1 Valid prediction for snap_scaffold_23-snap.798-T1 Couldn't classify 229959, 230076 Couldn't classify 230186, 230373 Sorry, prediction pasa_asmbl_31211.p1 fails validation. (CTG) GC 229959-230076 GT AGG (GGA) AG 230186-230373 CT CCC Valid prediction for snap_scaffold_23-snap.806-T1 Couldn't classify 62804, 63010 Sorry, prediction pasa_asmbl_30862.p1 fails validation. (CTT) CC 62804-63010 GT AGG (GTT) AG 64030-64083 GT AGG (GCC) AG 65640-65705 GT ATG (ATC) AG 65789-65869 GT TGG (GTG) AG 66101-66224 GT AAG (GGC) AG 66326-66458 GT TGG (GAA) AG 66593-66637 GT AAG (AAT) AG 66818-66895 GT GGG (CAC) AG 67139-67236 GT TGG (GTC) AG 67332-67373 GT AGG (TGT) AG 67515-67609 GT TGG (ATG) AG 67816-67900 GT TCG (CGA) AG 68061-68167 GT AGG (GTG) AG 68251-68367 GT AGG (ATG) AG 68523-68620 GT GGG (ACC) AG 68979-69052 GT TGG (GTG) AG 69174-69249 GT TGG (CAC) AG 69486-69540 AG GAA -recovered pasa_asmbl_30862.p1, initial, 67816, 67900 -recovered pasa_asmbl_30862.p1, initial, 68523, 68620 -recovered pasa_asmbl_30862.p1, terminal, 66593, 66637 -recovered pasa_asmbl_30862.p1, terminal, 67332, 67373 -recovered pasa_asmbl_30862.p1, terminal, 69486, 69540 -recovered pasa_asmbl_30862.p1, internal, 64030, 64083 -recovered pasa_asmbl_30862.p1, internal, 65640, 65705 -recovered pasa_asmbl_30862.p1, internal, 65789, 65869 -recovered pasa_asmbl_30862.p1, internal, 66101, 66224 -recovered pasa_asmbl_30862.p1, internal, 66326, 66458 -recovered pasa_asmbl_30862.p1, internal, 66593, 66637 -recovered pasa_asmbl_30862.p1, internal, 66818, 66895 -recovered pasa_asmbl_30862.p1, internal, 67139, 67236 -recovered pasa_asmbl_30862.p1, internal, 67332, 67373 -recovered pasa_asmbl_30862.p1, internal, 67515, 67609 -recovered pasa_asmbl_30862.p1, internal, 67816, 67900 -recovered pasa_asmbl_30862.p1, internal, 68061, 68167 -recovered pasa_asmbl_30862.p1, internal, 68251, 68367 -recovered pasa_asmbl_30862.p1, internal, 68523, 68620 -recovered pasa_asmbl_30862.p1, internal, 68979, 69052 -recovered pasa_asmbl_30862.p1, internal, 69174, 69249 Valid prediction for snap_scaffold_23-snap.804-T1 Couldn't classify 223726, 224874 Sorry, prediction pasa_asmbl_30856.p1 fails validation. (CCC) TA 223726-224874 CC GGC Valid prediction for GlimmerHMM_glimmerT_50915-T1 Valid prediction for snap_scaffold_23-snap.833-T1 Valid prediction for snap_scaffold_23-snap.834-T1 Valid prediction for snap_scaffold_23-snap.796-T1 Couldn't classify 263666, 264100 Sorry, prediction pasa_asmbl_30844.p1 fails validation. (CCG) AC 263666-264100 GT TGG (GTG) AG 264307-264641 GT AGG (CGA) AG 264851-265027 GT AGG (GTC) AG 265205-265362 GT AGG (GTA) AG 265429-265572 GT CAG (TGG) AG 265693-265851 GT GGG (AGG) AG 266543-266712 GT AGG (GGG) AG 266800-266896 GT TGG (TGC) AG 267105-267235 GT GAG (GTG) AG 267341-267467 GT AGG (GTG) AG 268305-268354 TG AGT -recovered pasa_asmbl_30844.p1, terminal, 268305, 268354 -recovered pasa_asmbl_30844.p1, internal, 264307, 264641 -recovered pasa_asmbl_30844.p1, internal, 264851, 265027 -recovered pasa_asmbl_30844.p1, internal, 265205, 265362 -recovered pasa_asmbl_30844.p1, internal, 265429, 265572 -recovered pasa_asmbl_30844.p1, internal, 265693, 265851 -recovered pasa_asmbl_30844.p1, internal, 266543, 266712 -recovered pasa_asmbl_30844.p1, internal, 266800, 266896 -recovered pasa_asmbl_30844.p1, internal, 267105, 267235 -recovered pasa_asmbl_30844.p1, internal, 267341, 267467 Valid prediction for snap_scaffold_23-snap.813-T1 Couldn't classify 239535, 239580 Couldn't classify 240667, 240763 Sorry, prediction CodingQuarry_transcript_35631-T1 fails validation. (ATG) AA 236972-237025 GT AGG (TTT) AG 237377-237452 GT AGG (CTC) AG 239535-239580 AT GTA (CAC) GT 240667-240763 GT AGG (CAT) AG 240921-240983 GT AGG (GTG) AG 241366-241554 GT AGG (CTG) AG 241730-241825 GT AGG (ACA) AG 241958-242018 GT TAG (CTC) AG 242128-242211 GT AGG (CCA) AG 242350-242456 GT TGG (ATC) AG 242690-242829 GT AGG (GTG) AG 243146-243315 GT ATG (ATG) AG 243807-243913 GG GAG -recovered CodingQuarry_transcript_35631-T1, initial, 236972, 237025 -recovered CodingQuarry_transcript_35631-T1, terminal, 243807, 243913 -recovered CodingQuarry_transcript_35631-T1, internal, 237377, 237452 -recovered CodingQuarry_transcript_35631-T1, internal, 240921, 240983 -recovered CodingQuarry_transcript_35631-T1, internal, 241366, 241554 -recovered CodingQuarry_transcript_35631-T1, internal, 241730, 241825 -recovered CodingQuarry_transcript_35631-T1, internal, 241958, 242018 -recovered CodingQuarry_transcript_35631-T1, internal, 242128, 242211 -recovered CodingQuarry_transcript_35631-T1, internal, 242350, 242456 -recovered CodingQuarry_transcript_35631-T1, internal, 242690, 242829 -recovered CodingQuarry_transcript_35631-T1, internal, 243146, 243315 Valid prediction for Augustus_model.g34022.t1 Valid prediction for Augustus_model.g34032.t1 Valid prediction for CodingQuarry_transcript_35625-T1 Valid prediction for snap_scaffold_23-snap.836-T1 Valid prediction for snap_scaffold_23-snap.828-T1 Valid prediction for snap_scaffold_23-snap.839-T1 Valid prediction for GlimmerHMM_glimmerT_50928-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 45926, rend_intergenic: 43637 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 68083, rend_intergenic: 65514 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159926, rend_intergenic: 153093 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 320053 -exon list size: 551 building trellis 0.2 0.4 0.5 0.7 0.9 1.1 1.3 1.4 1.6 1.8 2.0 2.2 2.4 2.5 2.7 2.9 3.1 3.3 3.4 3.6 3.8 4.0 4.2 4.3 4.5 4.7 4.9 5.1 5.2 5.4 5.6 5.8 6.0 6.1 6.3 6.5 6.7 6.9 7.1 7.2 7.4 7.6 7.8 8.0 8.1 8.3 8.5 8.7 8.9 9.0 9.2 9.4 9.6 9.8 9.9 10.1 10.3 10.5 10.7 10.8 11.0 11.2 11.4 11.6 11.8 11.9 12.1 12.3 12.5 12.7 12.8 13.0 13.2 13.4 13.6 13.7 13.9 14.1 14.3 14.5 14.6 14.8 15.0 15.2 15.4 15.6 15.7 15.9 16.1 16.3 16.5 16.6 16.8 17.0 17.2 17.4 17.5 17.7 17.9 18.1 18.3 18.4 18.6 18.8 19.0 19.2 19.3 19.5 19.7 19.9 20.1 20.3 20.4 20.6 20.8 21.0 21.2 21.3 21.5 21.7 21.9 22.1 22.2 22.4 22.6 22.8 23.0 23.1 23.3 23.5 23.7 23.9 24.1 24.2 24.4 24.6 24.8 25.0 25.1 25.3 25.5 25.7 25.9 26.0 26.2 26.4 26.6 26.8 26.9 27.1 27.3 27.5 27.7 27.8 28.0 28.2 28.4 28.6 28.8 28.9 29.1 29.3 29.5 29.7 29.8 30.0 30.2 30.4 30.6 30.7 30.9 31.1 31.3 31.5 31.6 31.8 32.0 32.2 32.4 32.5 32.7 32.9 33.1 33.3 33.5 33.6 33.8 34.0 34.2 34.4 34.5 34.7 34.9 35.1 35.3 35.4 35.6 35.8 36.0 36.2 36.3 36.5 36.7 36.9 37.1 37.3 37.4 37.6 37.8 38.0 38.2 38.3 38.5 38.7 38.9 39.1 39.2 39.4 39.6 39.8 40.0 40.1 40.3 40.5 40.7 40.9 41.0 41.2 41.4 41.6 41.8 42.0 42.1 42.3 42.5 42.7 42.9 43.0 43.2 43.4 43.6 43.8 43.9 44.1 44.3 44.5 44.7 44.8 45.0 45.2 45.4 45.6 45.8 45.9 46.1 46.3 46.5 46.7 46.8 47.0 47.2 47.4 47.6 47.7 47.9 48.1 48.3 48.5 48.6 48.8 49.0 49.2 49.4 49.5 49.7 49.9 50.1 50.3 50.5 50.6 50.8 51.0 51.2 51.4 51.5 51.7 51.9 52.1 52.3 52.4 52.6 52.8 53.0 53.2 53.3 53.5 53.7 53.9 54.1 54.2 54.4 54.6 54.8 55.0 55.2 55.3 55.5 55.7 55.9 56.1 56.2 56.4 56.6 56.8 57.0 57.1 57.3 57.5 57.7 57.9 58.0 58.2 58.4 58.6 58.8 59.0 59.1 59.3 59.5 59.7 59.9 60.0 60.2 60.4 60.6 60.8 60.9 61.1 61.3 61.5 61.7 61.8 62.0 62.2 62.4 62.6 62.7 62.9 63.1 63.3 63.5 63.7 63.8 64.0 64.2 64.4 64.6 64.7 64.9 65.1 65.3 65.5 65.6 65.8 66.0 66.2 66.4 66.5 66.7 66.9 67.1 67.3 67.5 67.6 67.8 68.0 68.2 68.4 68.5 68.7 68.9 69.1 69.3 69.4 69.6 69.8 70.0 70.2 70.3 70.5 70.7 70.9 71.1 71.2 71.4 71.6 71.8 72.0 72.2 72.3 72.5 72.7 72.9 73.1 73.2 73.4 73.6 73.8 74.0 74.1 74.3 74.5 74.7 74.9 75.0 75.2 75.4 75.6 75.8 75.9 76.1 76.3 76.5 76.7 76.9 77.0 77.2 77.4 77.6 77.8 77.9 78.1 78.3 78.5 78.7 78.8 79.0 79.2 79.4 79.6 79.7 79.9 80.1 80.3 80.5 80.7 80.8 81.0 81.2 81.4 81.6 81.7 81.9 82.1 82.3 82.5 82.6 82.8 83.0 83.2 83.4 83.5 83.7 83.9 84.1 84.3 84.4 84.6 84.8 85.0 85.2 85.4 85.5 85.7 85.9 86.1 86.3 86.4 86.6 86.8 87.0 87.2 87.3 87.5 87.7 87.9 88.1 88.2 88.4 88.6 88.8 89.0 89.2 89.3 89.5 89.7 89.9 90.1 90.2 90.4 90.6 90.8 91.0 91.1 91.3 91.5 91.7 91.9 92.0 92.2 92.4 92.6 92.8 92.9 93.1 93.3 93.5 93.7 93.9 94.0 94.2 94.4 94.6 94.8 94.9 95.1 95.3 95.5 95.7 95.8 96.0 96.2 96.4 96.6 96.7 96.9 97.1 97.3 97.5 97.6 97.8 98.0 98.2 98.4 98.6 98.7 98.9 99.1 99.3 99.5 99.6 99.8 -found 42 predictions from path traversal Error with prediction: snap lend_intergenic: 45926, rend_intergenic: 43637 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 68083, rend_intergenic: 65514 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159926, rend_intergenic: 153093 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 41 predictions persist after filtering for low support -building DP trellis -building trellis in range 306358 - 320053 -exon list size: 2 building trellis 25.0 50.0 75.0 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 306358 - 320036 -exon list size: 1 building trellis 33.3 66.7 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support