-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2233

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_61527-T1
add_exon() Sorry, GlimmerHMM_glimmerT_61527-T1 119-768-terminal-1 is invalid.
Valid prediction for GlimmerHMM_glimmerT_61526-T1
Valid prediction for snap_scaffold_2233-snap.1-T1
Couldn't classify 1, 768
Sorry, prediction Augustus_model.g40825.t1 fails validation.
(GAC)	 AA	1-768	GA	GAG
Valid prediction for snap_scaffold_2233-snap.2-T1
Couldn't classify 806, 1455
Sorry, prediction Augustus_model.g40824.t1 fails validation.
(ATG)	 AC	806-1455		AA

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1455
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 2 predictions persist after filtering for low support