-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_22/scaffold_22_6985050-7299316 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_22-snap.1373-T1 Valid prediction for GlimmerHMM_glimmerT_49689-T1 Valid prediction for snap_scaffold_22-snap.1386-T1 Valid prediction for snap_scaffold_22-snap.1421-T1 Valid prediction for snap_scaffold_22-snap.1384-T1 Valid prediction for Augustus_model.g33149.t1 Couldn't classify 285912, 285939 Couldn't classify 287682, 287849 Sorry, prediction pasa_asmbl_30167.p1 fails validation. (GCA) GC 285912-285939 GT CGG (GCC) AG 286784-286899 GT AGG (GCG) AG 287130-287321 GT AGG (GGC) AG 287682-287849 TC AGT -recovered pasa_asmbl_30167.p1, internal, 286784, 286899 -recovered pasa_asmbl_30167.p1, internal, 287130, 287321 Valid prediction for GlimmerHMM_glimmerT_49692-T1 Valid prediction for snap_scaffold_22-snap.1403-T1 Valid prediction for GlimmerHMM_glimmerT_49679-T1 Valid prediction for GlimmerHMM_glimmerT_49677-T1 Valid prediction for snap_scaffold_22-snap.1365-T1 Couldn't classify 121991, 122139 Couldn't classify 122965, 123106 Sorry, prediction pasa_asmbl_30151.p1 fails validation. (GGG) AC 121991-122139 GT AGG (GTG) AG 122332-122489 GT AGG (AAA) AG 122672-122870 GT GGG (ATG) AG 122965-123106 GG GAG -recovered pasa_asmbl_30151.p1, internal, 122332, 122489 -recovered pasa_asmbl_30151.p1, internal, 122672, 122870 Valid prediction for GlimmerHMM_glimmerT_49714-T1 Valid prediction for snap_scaffold_22-snap.1394-T1 Valid prediction for snap_scaffold_22-snap.1419-T1 Valid prediction for GlimmerHMM_glimmerT_49697-T1 Valid prediction for GlimmerHMM_glimmerT_49713-T1 Valid prediction for snap_scaffold_22-snap.1410-T1 Valid prediction for GlimmerHMM_glimmerT_49687-T1 Valid prediction for Augustus_model.g33164.t1 Couldn't classify 280389, 280436 Couldn't classify 280985, 281035 Sorry, prediction pasa_asmbl_30166.p1 fails validation. (CAG) GG 280389-280436 GT AGG (TTC) AG 280612-280830 GT AGG (GAC) AG 280985-281035 GA ACG -recovered pasa_asmbl_30166.p1, internal, 280612, 280830 Valid prediction for GlimmerHMM_glimmerT_49685-T1 Valid prediction for snap_scaffold_22-snap.1411-T1 Valid prediction for GlimmerHMM_glimmerT_49691-T1 Couldn't classify 245855, 245997 Couldn't classify 250417, 250988 Sorry, prediction pasa_asmbl_30164.p1 fails validation. (GGC) GT 245855-245997 GT AGG (GTT) AG 246335-246383 GT AGG (TAC) AG 246705-246851 GT AAG (AAC) AG 247021-247103 GT AGG (TGA) AG 249074-249164 GT AGG (GTG) AG 249310-249393 GT AGG (GAC) AG 249691-249777 GT ATG (ATG) AG 250151-250244 GT GGG (TGT) AG 250417-250988 GA AGG -recovered pasa_asmbl_30164.p1, initial, 250151, 250244 -recovered pasa_asmbl_30164.p1, internal, 246335, 246383 -recovered pasa_asmbl_30164.p1, internal, 246705, 246851 -recovered pasa_asmbl_30164.p1, internal, 247021, 247103 -recovered pasa_asmbl_30164.p1, internal, 249074, 249164 -recovered pasa_asmbl_30164.p1, internal, 249310, 249393 -recovered pasa_asmbl_30164.p1, internal, 249691, 249777 -recovered pasa_asmbl_30164.p1, internal, 250151, 250244 Valid prediction for Augustus_model.g33162.t1 Valid prediction for GlimmerHMM_glimmerT_49712-T1 Valid prediction for Augustus_model.g33168.t1 Valid prediction for snap_scaffold_22-snap.1420-T1 Valid prediction for GlimmerHMM_glimmerT_49708-T1 Valid prediction for Augustus_model.g33147.t1 Valid prediction for GlimmerHMM_glimmerT_49693-T1 Couldn't classify 227738, 227797 Sorry, prediction pasa_asmbl_30495.p2 fails validation. (CAG) CG 227738-227797 GT CGG (AGA) AG 228181-228280 GT AGG (AGA) AG 228450-228634 GA GAG -recovered pasa_asmbl_30495.p2, terminal, 228450, 228634 -recovered pasa_asmbl_30495.p2, internal, 228181, 228280 Valid prediction for Augustus_model.g33160.t1 Couldn't classify 125939, 126047 Couldn't classify 128796, 129186 Sorry, prediction pasa_asmbl_30152.p1 fails validation. (TGT) AG 125939-126047 GT AGG (AAC) AG 126138-126314 GT AGG (CAC) AG 127625-127709 GT AGG (CTG) AG 127923-128114 GT AGG (ACT) AG 128405-128572 GT GGG (ATA) AG 128796-129186 AC CCA -recovered pasa_asmbl_30152.p1, internal, 125939, 126047 -recovered pasa_asmbl_30152.p1, internal, 126138, 126314 -recovered pasa_asmbl_30152.p1, internal, 127625, 127709 -recovered pasa_asmbl_30152.p1, internal, 127923, 128114 -recovered pasa_asmbl_30152.p1, internal, 128405, 128572 Couldn't classify 135665, 135893 Sorry, prediction pasa_asmbl_30159.p1 fails validation. (CAT) AG 135665-135893 GT GAG (CTA) AG 138303-138398 GT ACG (CGA) AG 138891-138986 GT CGG (CTG) AG 140228-140321 GT AGG (GAA) AG 141484-141514 GA AAG -recovered pasa_asmbl_30159.p1, terminal, 141484, 141514 -recovered pasa_asmbl_30159.p1, internal, 135665, 135893 -recovered pasa_asmbl_30159.p1, internal, 138303, 138398 -recovered pasa_asmbl_30159.p1, internal, 138891, 138986 -recovered pasa_asmbl_30159.p1, internal, 140228, 140321 Valid prediction for pasa_asmbl_30146.p1 Valid prediction for GlimmerHMM_glimmerT_49698-T1 Valid prediction for CodingQuarry_transcript_34203-T1 Valid prediction for snap_scaffold_22-snap.1389-T1 Valid prediction for snap_scaffold_22-snap.1413-T1 Valid prediction for snap_scaffold_22-snap.1416-T1 Valid prediction for snap_scaffold_22-snap.1426-T1 Couldn't classify 281352, 281457 Couldn't classify 282896, 282959 Sorry, prediction pasa_asmbl_30487.p1 fails validation. (CAG) AT 281352-281457 GT TGG (GCT) AG 281745-281898 GT AGG (AAG) AG 282896-282959 AC TGA -recovered pasa_asmbl_30487.p1, terminal, 281745, 281898 -recovered pasa_asmbl_30487.p1, internal, 281745, 281898 Valid prediction for Augustus_model.g33155.t1 Valid prediction for GlimmerHMM_glimmerT_49690-T1 Valid prediction for snap_scaffold_22-snap.1375-T1 Valid prediction for Augustus_model.g33166.t1 Valid prediction for GlimmerHMM_glimmerT_49710-T1 Valid prediction for Augustus_model.g33156.t1 Valid prediction for snap_scaffold_22-snap.1396-T1 Valid prediction for GlimmerHMM_glimmerT_49699-T1 Couldn't classify 305641, 305781 Sorry, prediction pasa_asmbl_30465.p1 fails validation. (CCA) AT 305641-305781 GT AGG (GTT) AG 308091-308229 GT CGG (GGG) AG 309166-309291 GT GGG (ACC) AG 310586-310686 AA AGA -recovered pasa_asmbl_30465.p1, terminal, 310586, 310686 -recovered pasa_asmbl_30465.p1, internal, 308091, 308229 -recovered pasa_asmbl_30465.p1, internal, 309166, 309291 Valid prediction for snap_scaffold_22-snap.1407-T1 Valid prediction for Augustus_model.g33163.t1 Valid prediction for Augustus_model.g33145.t1 Valid prediction for snap_scaffold_22-snap.1368-T1 Valid prediction for pasa_asmbl_30147.p1 Valid prediction for Augustus_model.g33154.t1 Valid prediction for snap_scaffold_22-snap.1387-T1 Valid prediction for snap_scaffold_22-snap.1382-T1 Couldn't classify 224755, 224915 Sorry, prediction pasa_asmbl_30161.p1 fails validation. (ATG) AG 223105-223314 GT AGG (ATG) AG 224267-224438 GT AGG (TGA) AG 224755-224915 TG AAT -recovered pasa_asmbl_30161.p1, initial, 223105, 223314 -recovered pasa_asmbl_30161.p1, initial, 224267, 224438 -recovered pasa_asmbl_30161.p1, internal, 223105, 223314 -recovered pasa_asmbl_30161.p1, internal, 224267, 224438 Valid prediction for snap_scaffold_22-snap.1425-T1 Valid prediction for GlimmerHMM_glimmerT_49705-T1 Valid prediction for snap_scaffold_22-snap.1428-T1 Valid prediction for Augustus_model.g33170.t1 Valid prediction for snap_scaffold_22-snap.1399-T1 Valid prediction for snap_scaffold_22-snap.1369-T1 Valid prediction for snap_scaffold_22-snap.1414-T1 Couldn't classify 129726, 130172 Sorry, prediction pasa_asmbl_30153.p1 fails validation. (GTT) TC 129726-130172 GA ACG Valid prediction for GlimmerHMM_glimmerT_49706-T1 Couldn't classify 124145, 124189 Couldn't classify 124982, 125130 Sorry, prediction pasa_asmbl_30458.p1 fails validation. (ATC) CC 124145-124189 GT AGG (GTC) AG 124494-124623 GT TGG (ACT) AG 124982-125130 CA GCC -recovered pasa_asmbl_30458.p1, internal, 124494, 124623 Valid prediction for HiQ_model.g33138.t1 Valid prediction for snap_scaffold_22-snap.1405-T1 Couldn't classify 251190, 251567 Sorry, prediction pasa_asmbl_30165.p1 fails validation. (TCG) CC 251190-251567 GC AGG Valid prediction for GlimmerHMM_glimmerT_49696-T1 Valid prediction for Augustus_model.g33148.t1 Valid prediction for CodingQuarry_transcript_34198-T1 Valid prediction for snap_scaffold_22-snap.1391-T1 Couldn't classify 225518, 225536 Couldn't classify 227484, 227722 Sorry, prediction pasa_asmbl_30162.p1 fails validation. (AGG) AG 225518-225536 GT AGG (AAG) AG 226858-226949 GT AGG (AAA) AG 227213-227324 GT AGG (CCA) AG 227484-227722 CC AGC -recovered pasa_asmbl_30162.p1, internal, 225518, 225536 -recovered pasa_asmbl_30162.p1, internal, 226858, 226949 -recovered pasa_asmbl_30162.p1, internal, 227213, 227324 Valid prediction for snap_scaffold_22-snap.1424-T1 Valid prediction for GlimmerHMM_glimmerT_49703-T1 Valid prediction for snap_scaffold_22-snap.1429-T1 Valid prediction for snap_scaffold_22-snap.1379-T1 Valid prediction for HiQ_model.g33140.t1 Valid prediction for GlimmerHMM_glimmerT_49707-T1 Valid prediction for Augustus_model.g33151.t1 Valid prediction for GlimmerHMM_glimmerT_49694-T1 Valid prediction for Augustus_model.g33169.t1 Valid prediction for snap_scaffold_22-snap.1392-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_22-snap.1377-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 82870, 82989 Couldn't classify 83886, 84070 Sorry, prediction pasa_asmbl_29756.p1 fails validation. (GTG) AG 82870-82989 GT AGG (TCC) AG 83271-83382 GT TGG (GCC) AG 83886-84070 GG CTG -recovered pasa_asmbl_29756.p1, internal, 82870, 82989 -recovered pasa_asmbl_29756.p1, internal, 83271, 83382 Couldn't classify 279559, 279873 Sorry, prediction pasa_asmbl_29373.p1 fails validation. (TCA) TG 279559-279873 GT AAG (ATC) AG 280033-280210 GT TGG (GCA) AG 280416-280531 TG GAT -recovered pasa_asmbl_29373.p1, terminal, 280416, 280531 -recovered pasa_asmbl_29373.p1, internal, 280033, 280210 Valid prediction for snap_scaffold_22-snap.1423-T1 Valid prediction for CodingQuarry_transcript_34199-T1 Valid prediction for GlimmerHMM_glimmerT_49681-T1 Valid prediction for Augustus_model.g33141.t1 Valid prediction for snap_scaffold_22-snap.1422-T1 Valid prediction for Augustus_model.g33161.t1 Valid prediction for GlimmerHMM_glimmerT_49680-T1 Valid prediction for snap_scaffold_22-snap.1401-T1 Valid prediction for snap_scaffold_22-snap.1370-T1 Couldn't classify 272319, 272624 Sorry, prediction pasa_asmbl_29775.p1 fails validation. (TTC) TT 272319-272624 CA AAC Valid prediction for GlimmerHMM_glimmerT_49684-T1 Valid prediction for Augustus_model.g33142.t1 Valid prediction for snap_scaffold_22-snap.1430-T1 Valid prediction for snap_scaffold_22-snap.1402-T1 Valid prediction for pasa_asmbl_29379.p1 Valid prediction for Augustus_model.g33139.t1 Valid prediction for Augustus_model.g33167.t1 Couldn't classify 81172, 81206 Sorry, prediction pasa_asmbl_29384.p1 fails validation. (ATG) TA 79747-79932 GT AGG (GTG) AG 80378-80460 GT AGG (GTT) AG 80882-81018 GT AGG (GCA) AG 81172-81206 GG AGG -recovered pasa_asmbl_29384.p1, initial, 79747, 79932 -recovered pasa_asmbl_29384.p1, internal, 80378, 80460 -recovered pasa_asmbl_29384.p1, internal, 80882, 81018 Valid prediction for snap_scaffold_22-snap.1415-T1 Valid prediction for GlimmerHMM_glimmerT_49709-T1 Valid prediction for snap_scaffold_22-snap.1417-T1 Valid prediction for GlimmerHMM_glimmerT_49686-T1 Valid prediction for snap_scaffold_22-snap.1400-T1 Valid prediction for CodingQuarry_transcript_34200-T1 Couldn't classify 287667, 287702 Couldn't classify 289925, 289945 Sorry, prediction pasa_asmbl_29372.p1 fails validation. (ACT) AG 287667-287702 GT ACG (ATC) AG 288203-288328 GT AGG (GTG) AG 288581-288700 GT AGG (TTC) AG 289107-289190 GT AGG (AGT) AG 289504-289677 GT TGG (GCT) AG 289925-289945 GA GGG -recovered pasa_asmbl_29372.p1, internal, 287667, 287702 -recovered pasa_asmbl_29372.p1, internal, 288203, 288328 -recovered pasa_asmbl_29372.p1, internal, 288581, 288700 -recovered pasa_asmbl_29372.p1, internal, 289107, 289190 -recovered pasa_asmbl_29372.p1, internal, 289504, 289677 Valid prediction for GlimmerHMM_glimmerT_49683-T1 Valid prediction for GlimmerHMM_glimmerT_49695-T1 Couldn't classify 290665, 290698 Sorry, prediction pasa_asmbl_29371.p1 fails validation. (TGC) GA 290665-290698 GT TGG (GTG) AG 290865-291024 GT AGG (GGC) AG 291529-291718 GC AGG -recovered pasa_asmbl_29371.p1, terminal, 291529, 291718 -recovered pasa_asmbl_29371.p1, internal, 290865, 291024 -recovered pasa_asmbl_29371.p1, internal, 291529, 291718 Couldn't classify 303184, 303488 Sorry, prediction pasa_asmbl_29368.p1 fails validation. (ACA) TG 303184-303488 GT GAG (GAA) AG 303629-303684 GT AGG (TGT) AG 303809-303888 GT AAG (CTG) AG 303993-304112 GA GAG -recovered pasa_asmbl_29368.p1, terminal, 303993, 304112 -recovered pasa_asmbl_29368.p1, internal, 303629, 303684 -recovered pasa_asmbl_29368.p1, internal, 303809, 303888 Valid prediction for snap_scaffold_22-snap.1372-T1 Valid prediction for Augustus_model.g33153.t1 Valid prediction for pasa_asmbl_29380.p1 Valid prediction for HiQ_model.g33165.t1 Valid prediction for snap_scaffold_22-snap.1366-T1 Valid prediction for GlimmerHMM_glimmerT_49701-T1 Valid prediction for snap_scaffold_22-snap.1404-T1 Valid prediction for GlimmerHMM_glimmerT_49702-T1 Valid prediction for Augustus_model.g33144.t1 Valid prediction for CodingQuarry_transcript_34202-T1 Valid prediction for snap_scaffold_22-snap.1383-T1 Valid prediction for snap_scaffold_22-snap.1397-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for snap_scaffold_22-snap.1409-T1 Valid prediction for snap_scaffold_22-snap.1388-T1 Valid prediction for snap_scaffold_22-snap.1408-T1 Valid prediction for snap_scaffold_22-snap.1395-T1 Valid prediction for Augustus_model.g33143.t1 Valid prediction for snap_scaffold_22-snap.1374-T1 Valid prediction for Augustus_model.g33158.t1 Valid prediction for snap_scaffold_22-snap.1385-T1 Valid prediction for snap_scaffold_22-snap.1371-T1 Valid prediction for Augustus_model.g33146.t1 Valid prediction for GlimmerHMM_glimmerT_49678-T1 Valid prediction for CodingQuarry_transcript_34201-T1 Valid prediction for snap_scaffold_22-snap.1376-T1 Valid prediction for HiQ_model.g33152.t1 Valid prediction for snap_scaffold_22-snap.1418-T1 Valid prediction for Augustus_model.g33150.t1 Valid prediction for snap_scaffold_22-snap.1380-T1 Valid prediction for GlimmerHMM_glimmerT_49711-T1 Valid prediction for pasa_asmbl_29376.p1 Valid prediction for HiQ_model.g33159.t1 Valid prediction for GlimmerHMM_glimmerT_49688-T1 Valid prediction for GlimmerHMM_glimmerT_49715-T1 Valid prediction for snap_scaffold_22-snap.1390-T1 Valid prediction for GlimmerHMM_glimmerT_49704-T1 Valid prediction for GlimmerHMM_glimmerT_49700-T1 Valid prediction for snap_scaffold_22-snap.1393-T1 Valid prediction for snap_scaffold_22-snap.1381-T1 Valid prediction for GlimmerHMM_glimmerT_49682-T1 Valid prediction for snap_scaffold_22-snap.1406-T1 Valid prediction for snap_scaffold_22-snap.1364-T1 Valid prediction for pasa_asmbl_29367.p1 Valid prediction for pasa_asmbl_29386.p1 Valid prediction for snap_scaffold_22-snap.1378-T1 Valid prediction for snap_scaffold_22-snap.1412-T1 Valid prediction for snap_scaffold_22-snap.1398-T1 Valid prediction for Augustus_model.g33157.t1 Couldn't classify 39882, 39891 Sorry, prediction pasa_asmbl_29388.p1 fails validation. (CCC) TC 39882-39891 GT AGG (GAG) AG 40324-40407 GT CTG (ACT) AG 40581-40730 GT CGG (GCA) AG 40935-41081 GT CCG (ACC) AG 41351-41478 GT AGG (TAC) AG 41708-41885 GT AGG (TGA) AG 42402-42625 CC GAC add_exon() Sorry, pasa_asmbl_29388.p1 41708-41885-terminal-3 is invalid. -recovered pasa_asmbl_29388.p1, terminal, 41708, 41885 -recovered pasa_asmbl_29388.p1, terminal, 42402, 42625 -recovered pasa_asmbl_29388.p1, internal, 40324, 40407 -recovered pasa_asmbl_29388.p1, internal, 40581, 40730 -recovered pasa_asmbl_29388.p1, internal, 40935, 41081 -recovered pasa_asmbl_29388.p1, internal, 41351, 41478 -recovered pasa_asmbl_29388.p1, internal, 41708, 41885 Valid prediction for CodingQuarry_transcript_34197-T1 Valid prediction for snap_scaffold_22-snap.1367-T1 Valid prediction for snap_scaffold_22-snap.1427-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 255402, rend_intergenic: 255399 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 9145, rend_intergenic: 7005 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18485, rend_intergenic: 16702 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29424, rend_intergenic: 28644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35712, rend_intergenic: 33328 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 37433, rend_intergenic: 35751 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45006, rend_intergenic: 38276 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50644, rend_intergenic: 45259 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62859, rend_intergenic: 56570 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65315, rend_intergenic: 62944 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73588, rend_intergenic: 69505 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75654, rend_intergenic: 73907 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97916, rend_intergenic: 75937 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102364, rend_intergenic: 98083 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106785, rend_intergenic: 102547 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113761, rend_intergenic: 106988 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123166, rend_intergenic: 120520 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124612, rend_intergenic: 124017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135973, rend_intergenic: 125023 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141539, rend_intergenic: 137614 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159351, rend_intergenic: 157778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164013, rend_intergenic: 159429 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187039, rend_intergenic: 164240 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201360, rend_intergenic: 187701 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215852, rend_intergenic: 208471 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234212, rend_intergenic: 229921 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251567, rend_intergenic: 239946 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251704, rend_intergenic: 251611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 255402, rend_intergenic: 251725 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 266231, rend_intergenic: 255520 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270489, rend_intergenic: 267572 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 274781, rend_intergenic: 272338 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 287912, rend_intergenic: 279281 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 310686, rend_intergenic: 305302 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 314267 -exon list size: 736 building trellis 0.1 0.3 0.4 0.5 0.7 0.8 0.9 1.1 1.2 1.4 1.5 1.6 1.8 1.9 2.0 2.2 2.3 2.4 2.6 2.7 2.8 3.0 3.1 3.3 3.4 3.5 3.7 3.8 3.9 4.1 4.2 4.3 4.5 4.6 4.7 4.9 5.0 5.1 5.3 5.4 5.6 5.7 5.8 6.0 6.1 6.2 6.4 6.5 6.6 6.8 6.9 7.0 7.2 7.3 7.5 7.6 7.7 7.9 8.0 8.1 8.3 8.4 8.5 8.7 8.8 8.9 9.1 9.2 9.3 9.5 9.6 9.8 9.9 10.0 10.2 10.3 10.4 10.6 10.7 10.8 11.0 11.1 11.2 11.4 11.5 11.7 11.8 11.9 12.1 12.2 12.3 12.5 12.6 12.7 12.9 13.0 13.1 13.3 13.4 13.6 13.7 13.8 14.0 14.1 14.2 14.4 14.5 14.6 14.8 14.9 15.0 15.2 15.3 15.4 15.6 15.7 15.9 16.0 16.1 16.3 16.4 16.5 16.7 16.8 16.9 17.1 17.2 17.3 17.5 17.6 17.8 17.9 18.0 18.2 18.3 18.4 18.6 18.7 18.8 19.0 19.1 19.2 19.4 19.5 19.6 19.8 19.9 20.1 20.2 20.3 20.5 20.6 20.7 20.9 21.0 21.1 21.3 21.4 21.5 21.7 21.8 22.0 22.1 22.2 22.4 22.5 22.6 22.8 22.9 23.0 23.2 23.3 23.4 23.6 23.7 23.8 24.0 24.1 24.3 24.4 24.5 24.7 24.8 24.9 25.1 25.2 25.3 25.5 25.6 25.7 25.9 26.0 26.2 26.3 26.4 26.6 26.7 26.8 27.0 27.1 27.2 27.4 27.5 27.6 27.8 27.9 28.0 28.2 28.3 28.5 28.6 28.7 28.9 29.0 29.1 29.3 29.4 29.5 29.7 29.8 29.9 30.1 30.2 30.4 30.5 30.6 30.8 30.9 31.0 31.2 31.3 31.4 31.6 31.7 31.8 32.0 32.1 32.2 32.4 32.5 32.7 32.8 32.9 33.1 33.2 33.3 33.5 33.6 33.7 33.9 34.0 34.1 34.3 34.4 34.6 34.7 34.8 35.0 35.1 35.2 35.4 35.5 35.6 35.8 35.9 36.0 36.2 36.3 36.4 36.6 36.7 36.9 37.0 37.1 37.3 37.4 37.5 37.7 37.8 37.9 38.1 38.2 38.3 38.5 38.6 38.8 38.9 39.0 39.2 39.3 39.4 39.6 39.7 39.8 40.0 40.1 40.2 40.4 40.5 40.7 40.8 40.9 41.1 41.2 41.3 41.5 41.6 41.7 41.9 42.0 42.1 42.3 42.4 42.5 42.7 42.8 43.0 43.1 43.2 43.4 43.5 43.6 43.8 43.9 44.0 44.2 44.3 44.4 44.6 44.7 44.9 45.0 45.1 45.3 45.4 45.5 45.7 45.8 45.9 46.1 46.2 46.3 46.5 46.6 46.7 46.9 47.0 47.2 47.3 47.4 47.6 47.7 47.8 48.0 48.1 48.2 48.4 48.5 48.6 48.8 48.9 49.1 49.2 49.3 49.5 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.5 50.7 50.8 50.9 51.1 51.2 51.4 51.5 51.6 51.8 51.9 52.0 52.2 52.3 52.4 52.6 52.7 52.8 53.0 53.1 53.3 53.4 53.5 53.7 53.8 53.9 54.1 54.2 54.3 54.5 54.6 54.7 54.9 55.0 55.1 55.3 55.4 55.6 55.7 55.8 56.0 56.1 56.2 56.4 56.5 56.6 56.8 56.9 57.0 57.2 57.3 57.5 57.6 57.7 57.9 58.0 58.1 58.3 58.4 58.5 58.7 58.8 58.9 59.1 59.2 59.3 59.5 59.6 59.8 59.9 60.0 60.2 60.3 60.4 60.6 60.7 60.8 61.0 61.1 61.2 61.4 61.5 61.7 61.8 61.9 62.1 62.2 62.3 62.5 62.6 62.7 62.9 63.0 63.1 63.3 63.4 63.6 63.7 63.8 64.0 64.1 64.2 64.4 64.5 64.6 64.8 64.9 65.0 65.2 65.3 65.4 65.6 65.7 65.9 66.0 66.1 66.3 66.4 66.5 66.7 66.8 66.9 67.1 67.2 67.3 67.5 67.6 67.8 67.9 68.0 68.2 68.3 68.4 68.6 68.7 68.8 69.0 69.1 69.2 69.4 69.5 69.6 69.8 69.9 70.1 70.2 70.3 70.5 70.6 70.7 70.9 71.0 71.1 71.3 71.4 71.5 71.7 71.8 72.0 72.1 72.2 72.4 72.5 72.6 72.8 72.9 73.0 73.2 73.3 73.4 73.6 73.7 73.8 74.0 74.1 74.3 74.4 74.5 74.7 74.8 74.9 75.1 75.2 75.3 75.5 75.6 75.7 75.9 76.0 76.2 76.3 76.4 76.6 76.7 76.8 77.0 77.1 77.2 77.4 77.5 77.6 77.8 77.9 78.0 78.2 78.3 78.5 78.6 78.7 78.9 79.0 79.1 79.3 79.4 79.5 79.7 79.8 79.9 80.1 80.2 80.4 80.5 80.6 80.8 80.9 81.0 81.2 81.3 81.4 81.6 81.7 81.8 82.0 82.1 82.2 82.4 82.5 82.7 82.8 82.9 83.1 83.2 83.3 83.5 83.6 83.7 83.9 84.0 84.1 84.3 84.4 84.6 84.7 84.8 85.0 85.1 85.2 85.4 85.5 85.6 85.8 85.9 86.0 86.2 86.3 86.4 86.6 86.7 86.9 87.0 87.1 87.3 87.4 87.5 87.7 87.8 87.9 88.1 88.2 88.3 88.5 88.6 88.8 88.9 89.0 89.2 89.3 89.4 89.6 89.7 89.8 90.0 90.1 90.2 90.4 90.5 90.7 90.8 90.9 91.1 91.2 91.3 91.5 91.6 91.7 91.9 92.0 92.1 92.3 92.4 92.5 92.7 92.8 93.0 93.1 93.2 93.4 93.5 93.6 93.8 93.9 94.0 94.2 94.3 94.4 94.6 94.7 94.9 95.0 95.1 95.3 95.4 95.5 95.7 95.8 95.9 96.1 96.2 96.3 96.5 96.6 96.7 96.9 97.0 97.2 97.3 97.4 97.6 97.7 97.8 98.0 98.1 98.2 98.4 98.5 98.6 98.8 98.9 99.1 99.2 99.3 99.5 99.6 99.7 99.9 -found 44 predictions from path traversal Error with prediction: GlimmerHMM lend_intergenic: 255402, rend_intergenic: 255399 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 9145, rend_intergenic: 7005 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18485, rend_intergenic: 16702 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29424, rend_intergenic: 28644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35712, rend_intergenic: 33328 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 37433, rend_intergenic: 35751 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45006, rend_intergenic: 38276 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50644, rend_intergenic: 45259 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62859, rend_intergenic: 56570 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65315, rend_intergenic: 62944 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73588, rend_intergenic: 69505 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75654, rend_intergenic: 73907 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97916, rend_intergenic: 75937 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102364, rend_intergenic: 98083 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106785, rend_intergenic: 102547 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113761, rend_intergenic: 106988 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123166, rend_intergenic: 120520 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124612, rend_intergenic: 124017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135973, rend_intergenic: 125023 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141539, rend_intergenic: 137614 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159351, rend_intergenic: 157778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164013, rend_intergenic: 159429 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187039, rend_intergenic: 164240 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201360, rend_intergenic: 187701 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215852, rend_intergenic: 208471 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234212, rend_intergenic: 229921 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251567, rend_intergenic: 239946 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251704, rend_intergenic: 251611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 255402, rend_intergenic: 251725 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 266231, rend_intergenic: 255520 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 270489, rend_intergenic: 267572 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 274781, rend_intergenic: 272338 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 287912, rend_intergenic: 279281 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 310686, rend_intergenic: 305302 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 35 predictions persist after filtering for low support