-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_213

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_213-snap.2-T1
Couldn't classify 1045, 1072
Sorry, prediction Augustus_model.g39752.t1 fails validation.
(GTC)	 AG	1045-1072	GT	TGG
(TGG)	 AG	1449-1559	AT	AAA
-recovered Augustus_model.g39752.t1, terminal, 1449, 1559
-recovered Augustus_model.g39752.t1, internal, 1045, 1072
Valid prediction for GlimmerHMM_glimmerT_60017-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 482, 605
Sorry, prediction snap_scaffold_213-snap.1-T1 fails validation.
(TGA)	 AG	482-605	GT	ACG
(AGA)	 AG	2071-2101	GT	AAG
(GAA)	 AG	6805-6870	GT	AGG
(GTA)	 AG	7970-8070	GG	AGG
-recovered snap_scaffold_213-snap.1-T1, terminal, 7970, 8070
-recovered snap_scaffold_213-snap.1-T1, internal, 482, 605
-recovered snap_scaffold_213-snap.1-T1, internal, 2071, 2101
-recovered snap_scaffold_213-snap.1-T1, internal, 6805, 6870
Valid prediction for GlimmerHMM_glimmerT_60016-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9033, rend_intergenic: 4147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 9514
-exon list size: 17


building trellis

5.3    
10.5    
15.8    
21.1    
26.3    
31.6    
36.8    
42.1    
47.4    
52.6    
57.9    
63.2    
68.4    
73.7    
78.9    
84.2    
89.5    
94.7    
-found 2 predictions from path traversal
Error with prediction: snap lend_intergenic: 9033, rend_intergenic: 4147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support