-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_21/scaffold_21_9682119-9860227

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 94624, 94764
Sorry, prediction pasa_asmbl_28988.p1 fails validation.
(ATG)	 AG	82447-82525	GT	AAG
(ATG)	 AG	82669-82764	GT	AGG
(TGA)	 AG	83357-83404	GT	AGG
(GTG)	 AG	83852-84037	GT	CAG
(CAT)	 AG	84383-84522	GT	ATG
(CCT)	 AG	84624-84731	GT	AGG
(GAG)	 AG	84921-85107	GT	CAG
(GTA)	 AG	85260-85429	GT	TGG
(GGT)	 AG	86009-86149	GT	AGG
(AAC)	 AG	86396-86522	GT	TGG
(GTT)	 AG	86792-86884	GT	CGG
(CTG)	 AG	86968-87111	GT	CGG
(CTC)	 AG	87214-87347	GT	AGG
(CGT)	 AG	87734-87921	GT	AGG
(GAA)	 AG	88054-88170	GT	AGG
(TCT)	 AG	88486-88672	GT	AGG
(GTG)	 AG	88813-88903	GT	AGG
(GCA)	 AG	89038-89151	GT	AGG
(GCT)	 AG	89277-89415	GT	AGG
(ACG)	 AG	89557-89734	GT	AGG
(GTG)	 AG	89978-90130	GT	AGG
(ACT)	 AG	91297-91545	GT	AGG
(ATC)	 AG	91802-91925	GT	CAG
(TCA)	 AG	92323-92570	GT	AGG
(GGT)	 AG	92968-93143	GT	AAG
(GTT)	 AG	93442-93671	GT	CGG
(TTG)	 AG	93782-94069	GT	CGG
(GGG)	 AG	94314-94471	GT	CAG
(GTG)	 AG	94624-94764	GT	AGG
-recovered pasa_asmbl_28988.p1, initial, 82447, 82525
-recovered pasa_asmbl_28988.p1, initial, 82669, 82764
-recovered pasa_asmbl_28988.p1, internal, 82447, 82525
-recovered pasa_asmbl_28988.p1, internal, 82669, 82764
-recovered pasa_asmbl_28988.p1, internal, 83357, 83404
-recovered pasa_asmbl_28988.p1, internal, 83852, 84037
-recovered pasa_asmbl_28988.p1, internal, 84383, 84522
-recovered pasa_asmbl_28988.p1, internal, 84624, 84731
-recovered pasa_asmbl_28988.p1, internal, 84921, 85107
-recovered pasa_asmbl_28988.p1, internal, 85260, 85429
-recovered pasa_asmbl_28988.p1, internal, 86009, 86149
-recovered pasa_asmbl_28988.p1, internal, 86396, 86522
-recovered pasa_asmbl_28988.p1, internal, 86792, 86884
-recovered pasa_asmbl_28988.p1, internal, 86968, 87111
-recovered pasa_asmbl_28988.p1, internal, 87214, 87347
-recovered pasa_asmbl_28988.p1, internal, 87734, 87921
-recovered pasa_asmbl_28988.p1, internal, 88054, 88170
-recovered pasa_asmbl_28988.p1, internal, 88486, 88672
-recovered pasa_asmbl_28988.p1, internal, 88813, 88903
-recovered pasa_asmbl_28988.p1, internal, 89038, 89151
-recovered pasa_asmbl_28988.p1, internal, 89277, 89415
-recovered pasa_asmbl_28988.p1, internal, 89557, 89734
-recovered pasa_asmbl_28988.p1, internal, 89978, 90130
-recovered pasa_asmbl_28988.p1, internal, 91297, 91545
-recovered pasa_asmbl_28988.p1, internal, 91802, 91925
-recovered pasa_asmbl_28988.p1, internal, 92323, 92570
-recovered pasa_asmbl_28988.p1, internal, 92968, 93143
-recovered pasa_asmbl_28988.p1, internal, 93442, 93671
-recovered pasa_asmbl_28988.p1, internal, 93782, 94069
-recovered pasa_asmbl_28988.p1, internal, 94314, 94471
-recovered pasa_asmbl_28988.p1, internal, 94624, 94764
Valid prediction for Augustus_model.g32344.t1
Valid prediction for snap_scaffold_21-snap.2126-T1
Valid prediction for snap_scaffold_21-snap.2112-T1
Valid prediction for Augustus_model.g32337.t1
Valid prediction for GlimmerHMM_glimmerT_48428-T1
Couldn't classify 97190, 97216
Sorry, prediction pasa_asmbl_28843.p1 fails validation.
(ATG)	 AC	95479-95516	GT	ACG
(ACT)	 AG	95711-95952	GT	AGG
(ACT)	 AG	96114-96268	GT	AGG
(TTG)	 AG	97190-97216	TG	AGT
-recovered pasa_asmbl_28843.p1, initial, 95479, 95516
-recovered pasa_asmbl_28843.p1, internal, 95711, 95952
-recovered pasa_asmbl_28843.p1, internal, 96114, 96268
Valid prediction for snap_scaffold_21-snap.2131-T1
Valid prediction for snap_scaffold_21-snap.2091-T1
Valid prediction for snap_scaffold_21-snap.2106-T1
Valid prediction for snap_scaffold_21-snap.2124-T1
Valid prediction for GlimmerHMM_glimmerT_48403-T1
Valid prediction for pasa_asmbl_28966.p2
Valid prediction for GlimmerHMM_glimmerT_48421-T1
Valid prediction for Augustus_model.g32349.t1
Valid prediction for GlimmerHMM_glimmerT_48414-T1
Valid prediction for HiQ_model.g32340.t1
Valid prediction for snap_scaffold_21-snap.2120-T1
Valid prediction for snap_scaffold_21-snap.2096-T1
Couldn't classify 140220, 140309
Couldn't classify 142433, 142596
Sorry, prediction pasa_asmbl_28846.p1 fails validation.
(GCC)	 GC	140220-140309	GT	AGG
(GAG)	 AG	141038-141137	GT	AAG
(GTT)	 AG	142433-142596	GG	TAG
-recovered pasa_asmbl_28846.p1, internal, 141038, 141137
Valid prediction for GlimmerHMM_glimmerT_48419-T1
Valid prediction for snap_scaffold_21-snap.2105-T1
Valid prediction for snap_scaffold_21-snap.2113-T1
Valid prediction for Augustus_model.g32341.t1
Valid prediction for snap_scaffold_21-snap.2119-T1
Valid prediction for snap_scaffold_21-snap.2098-T1
Valid prediction for snap_scaffold_21-snap.2121-T1
Valid prediction for snap_scaffold_21-snap.2125-T1
Valid prediction for GlimmerHMM_glimmerT_48411-T1
Valid prediction for snap_scaffold_21-snap.2108-T1
Valid prediction for GlimmerHMM_glimmerT_48426-T1
Couldn't classify 85260, 85428
Couldn't classify 86044, 86149
Sorry, prediction CodingQuarry_transcript_32698-T1 fails validation.
(ATG)	 AG	82447-82525	GT	AAG
(ATG)	 AG	82669-82764	GT	AGG
(GTG)	 AG	83852-84037	GT	CAG
(CAT)	 AG	84383-84522	GT	ATG
(CCT)	 AG	84624-84731	GT	AGG
(GAG)	 AG	84921-85107	GT	CAG
(GTA)	 AG	85260-85428	GG	ATG
(GGG)	 GG	86044-86149	GT	AGG
(AAC)	 AG	86396-86522	GT	TGG
(GTT)	 AG	86792-86884	GT	CGG
(CTG)	 AG	86968-87111	GT	CGG
(CTC)	 AG	87214-87347	GT	AGG
(CGT)	 AG	87734-87921	GT	AGG
(GAA)	 AG	88054-88170	GT	AGG
(TCT)	 AG	88486-88672	GT	AGG
(GTG)	 AG	88813-88903	GT	AGG
(GCA)	 AG	89038-89151	GT	AGG
(GCT)	 AG	89277-89415	GT	AGG
(ACG)	 AG	89557-89734	GT	AGG
(GTG)	 AG	89978-90157	CC	GAC
-recovered CodingQuarry_transcript_32698-T1, initial, 82447, 82525
-recovered CodingQuarry_transcript_32698-T1, initial, 82669, 82764
-recovered CodingQuarry_transcript_32698-T1, terminal, 89978, 90157
-recovered CodingQuarry_transcript_32698-T1, internal, 82447, 82525
-recovered CodingQuarry_transcript_32698-T1, internal, 82669, 82764
-recovered CodingQuarry_transcript_32698-T1, internal, 83852, 84037
-recovered CodingQuarry_transcript_32698-T1, internal, 84383, 84522
-recovered CodingQuarry_transcript_32698-T1, internal, 84624, 84731
-recovered CodingQuarry_transcript_32698-T1, internal, 84921, 85107
-recovered CodingQuarry_transcript_32698-T1, internal, 86396, 86522
-recovered CodingQuarry_transcript_32698-T1, internal, 86792, 86884
-recovered CodingQuarry_transcript_32698-T1, internal, 86968, 87111
-recovered CodingQuarry_transcript_32698-T1, internal, 87214, 87347
-recovered CodingQuarry_transcript_32698-T1, internal, 87734, 87921
-recovered CodingQuarry_transcript_32698-T1, internal, 88054, 88170
-recovered CodingQuarry_transcript_32698-T1, internal, 88486, 88672
-recovered CodingQuarry_transcript_32698-T1, internal, 88813, 88903
-recovered CodingQuarry_transcript_32698-T1, internal, 89038, 89151
-recovered CodingQuarry_transcript_32698-T1, internal, 89277, 89415
-recovered CodingQuarry_transcript_32698-T1, internal, 89557, 89734
Valid prediction for Augustus_model.g32351.t1
Valid prediction for snap_scaffold_21-snap.2089-T1
Valid prediction for CodingQuarry_transcript_32697-T1
Valid prediction for CodingQuarry_transcript_32695-T1
Valid prediction for snap_scaffold_21-snap.2110-T1
Couldn't classify 164464, 164602
Couldn't classify 168121, 168255
Sorry, prediction pasa_asmbl_28947.p1 fails validation.
(GTT)	 TG	164464-164602	GT	TGG
(GTG)	 AG	164950-165079	GT	GGG
(GAA)	 AG	165183-165274	GT	ATG
(TGA)	 AG	165553-165648	GT	GGG
(GGG)	 AG	165754-165831	GT	GAG
(TCT)	 AG	166258-166350	GT	TGG
(GAG)	 AG	166523-166644	GT	TGG
(CCG)	 AG	167118-167227	GT	ATG
(GTT)	 AG	167321-167480	GT	TGG
(TGG)	 AG	168121-168255	AT	ACA
-recovered pasa_asmbl_28947.p1, internal, 164950, 165079
-recovered pasa_asmbl_28947.p1, internal, 165183, 165274
-recovered pasa_asmbl_28947.p1, internal, 165553, 165648
-recovered pasa_asmbl_28947.p1, internal, 165754, 165831
-recovered pasa_asmbl_28947.p1, internal, 166258, 166350
-recovered pasa_asmbl_28947.p1, internal, 166523, 166644
-recovered pasa_asmbl_28947.p1, internal, 167118, 167227
-recovered pasa_asmbl_28947.p1, internal, 167321, 167480
Valid prediction for Augustus_model.g32342.t1
Valid prediction for GlimmerHMM_glimmerT_48401-T1
Valid prediction for CodingQuarry_transcript_32696-T1
Valid prediction for GlimmerHMM_glimmerT_48418-T1
Valid prediction for snap_scaffold_21-snap.2092-T1
Valid prediction for snap_scaffold_21-snap.2093-T1
Valid prediction for GlimmerHMM_glimmerT_48415-T1
Valid prediction for snap_scaffold_21-snap.2132-T1
Valid prediction for snap_scaffold_21-snap.2103-T1
Valid prediction for snap_scaffold_21-snap.2097-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_21-snap.2099-T1
Valid prediction for snap_scaffold_21-snap.2115-T1
Valid prediction for GlimmerHMM_glimmerT_48427-T1
Valid prediction for snap_scaffold_21-snap.2109-T1
Valid prediction for Augustus_model.g32334.t1
Valid prediction for CodingQuarry_transcript_32693-T1
Valid prediction for CodingQuarry_transcript_32700-T1
Valid prediction for GlimmerHMM_glimmerT_48417-T1
Valid prediction for Augustus_model.g32350.t1
Valid prediction for Augustus_model.g32333.t1
Valid prediction for CodingQuarry_transcript_32701-T1
Valid prediction for snap_scaffold_21-snap.2101-T1
Valid prediction for snap_scaffold_21-snap.2127-T1
Valid prediction for Augustus_model.g32347.t1
Valid prediction for snap_scaffold_21-snap.2130-T1
Valid prediction for GlimmerHMM_glimmerT_48406-T1
Valid prediction for pasa_asmbl_27962.p1
Valid prediction for GlimmerHMM_glimmerT_48422-T1
Valid prediction for GlimmerHMM_glimmerT_48404-T1
Valid prediction for snap_scaffold_21-snap.2116-T1
Valid prediction for GlimmerHMM_glimmerT_48425-T1
Valid prediction for Augustus_model.g32338.t1
Valid prediction for GlimmerHMM_glimmerT_48420-T1
Valid prediction for GlimmerHMM_glimmerT_48424-T1
Valid prediction for GlimmerHMM_glimmerT_48413-T1
Valid prediction for snap_scaffold_21-snap.2095-T1
Valid prediction for snap_scaffold_21-snap.2129-T1
Valid prediction for snap_scaffold_21-snap.2102-T1
Valid prediction for GlimmerHMM_glimmerT_48400-T1
Valid prediction for Augustus_model.g32335.t1
Valid prediction for pasa_asmbl_27969.p1
Couldn't classify 140763, 140900
Couldn't classify 142670, 142719
Sorry, prediction pasa_asmbl_27964.p1 fails validation.
(TTC)	 GC	140763-140900	GT	AGG
(GCG)	 AG	141392-141566	GT	AGG
(TCA)	 AG	141698-141849	GT	AGG
(AAC)	 AG	142115-142241	GT	CGG
(ACA)	 AG	142670-142719	GA	AGG
-recovered pasa_asmbl_27964.p1, terminal, 141392, 141566
-recovered pasa_asmbl_27964.p1, internal, 141392, 141566
-recovered pasa_asmbl_27964.p1, internal, 141698, 141849
-recovered pasa_asmbl_27964.p1, internal, 142115, 142241
Valid prediction for GlimmerHMM_glimmerT_48408-T1
Valid prediction for GlimmerHMM_glimmerT_48402-T1
Valid prediction for GlimmerHMM_glimmerT_48412-T1
Valid prediction for snap_scaffold_21-snap.2123-T1
Valid prediction for CodingQuarry_transcript_32694-T1
Couldn't classify 137829, 137912
Couldn't classify 138460, 138606
Sorry, prediction pasa_asmbl_27965.p1 fails validation.
(CTT)	 GT	137829-137912	GT	AGG
(GCT)	 AG	138008-138148	GT	CGG
(GTG)	 AG	138460-138606	AC	CCA
-recovered pasa_asmbl_27965.p1, internal, 138008, 138148
Valid prediction for HiQ_model.g32336.t1
Valid prediction for snap_scaffold_21-snap.2107-T1
Valid prediction for CodingQuarry_transcript_32692-T1
Couldn't classify 135761, 135830
Couldn't classify 137434, 137481
Sorry, prediction pasa_asmbl_27966.p1 fails validation.
(ATC)	 AC	135761-135830	GT	GTG
(TCT)	 AG	135922-136037	GT	CTG
(GGA)	 AG	136172-136234	GT	AGG
(CAA)	 AG	136401-136484	GT	AGG
(GTG)	 AG	136738-136799	GT	AGG
(GGG)	 AG	136945-137047	GT	ACG
(GAC)	 AG	137434-137481	AG	GGA
-recovered pasa_asmbl_27966.p1, internal, 135922, 136037
-recovered pasa_asmbl_27966.p1, internal, 136172, 136234
-recovered pasa_asmbl_27966.p1, internal, 136401, 136484
-recovered pasa_asmbl_27966.p1, internal, 136738, 136799
-recovered pasa_asmbl_27966.p1, internal, 136945, 137047
Valid prediction for snap_scaffold_21-snap.2117-T1
Valid prediction for snap_scaffold_21-snap.2111-T1
Valid prediction for snap_scaffold_21-snap.2114-T1
Valid prediction for Augustus_model.g32345.t1
Valid prediction for pasa_asmbl_27967.p1
Valid prediction for GlimmerHMM_glimmerT_48416-T1
Couldn't classify 143421, 143506
Sorry, prediction pasa_asmbl_27963.p1 fails validation.
(GAT)	 GT	143421-143506	GT	AGG
(GTT)	 AG	143612-143732	GT	GGG
(ATC)	 AG	143870-144061	GT	TGG
(ATA)	 AG	144179-144419	GT	AGG
(ATT)	 AG	144591-144964	GT	CGG
(TGT)	 AG	145079-145171	GT	AGG
(GAA)	 AG	145259-145432	CC	AAC
-recovered pasa_asmbl_27963.p1, terminal, 145259, 145432
-recovered pasa_asmbl_27963.p1, internal, 143612, 143732
-recovered pasa_asmbl_27963.p1, internal, 143870, 144061
-recovered pasa_asmbl_27963.p1, internal, 144179, 144419
-recovered pasa_asmbl_27963.p1, internal, 144591, 144964
-recovered pasa_asmbl_27963.p1, internal, 145079, 145171
Valid prediction for GlimmerHMM_glimmerT_48423-T1
Valid prediction for GlimmerHMM_glimmerT_48405-T1
Couldn't classify 6389, 6494
Sorry, prediction pasa_asmbl_27971.p1 fails validation.
(GAT)	 GG	6389-6494	GT	GGG
(GTC)	 AG	6867-6931	GT	AGG
(ACA)	 AG	7033-7133	GT	ATG
(GTT)	 AG	7629-7680	GT	AGG
(GAG)	 AG	7897-7992	CC	AAC
-recovered pasa_asmbl_27971.p1, terminal, 7897, 7992
-recovered pasa_asmbl_27971.p1, internal, 6867, 6931
-recovered pasa_asmbl_27971.p1, internal, 7033, 7133
-recovered pasa_asmbl_27971.p1, internal, 7629, 7680
Valid prediction for snap_scaffold_21-snap.2090-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_48410-T1
Valid prediction for snap_scaffold_21-snap.2094-T1
Valid prediction for Augustus_model.g32343.t1
Valid prediction for GlimmerHMM_glimmerT_48409-T1
Valid prediction for snap_scaffold_21-snap.2104-T1
Valid prediction for GlimmerHMM_glimmerT_48407-T1
Valid prediction for Augustus_model.g32339.t1
Valid prediction for snap_scaffold_21-snap.2122-T1
Valid prediction for Augustus_model.g32348.t1
Valid prediction for snap_scaffold_21-snap.2128-T1
Valid prediction for snap_scaffold_21-snap.2100-T1
Valid prediction for snap_scaffold_21-snap.2118-T1
Valid prediction for Augustus_model.g32346.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9240, rend_intergenic: 4859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20300, rend_intergenic: 18710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29635, rend_intergenic: 23582  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38150, rend_intergenic: 31866  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97900, rend_intergenic: 86948  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107051, rend_intergenic: 106484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108641, rend_intergenic: 107907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131560, rend_intergenic: 129730  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138283, rend_intergenic: 135247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155730, rend_intergenic: 139118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168979, rend_intergenic: 159733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176924, rend_intergenic: 170337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 178109
-exon list size: 495


building trellis

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33.0    
33.2    
33.4    
33.6    
33.8    
34.0    
34.2    
34.4    
34.6    
34.8    
35.0    
35.2    
35.4    
35.6    
35.8    
36.0    
36.2    
36.4    
36.6    
36.8    
37.0    
37.2    
37.4    
37.6    
37.8    
38.0    
38.2    
38.4    
38.6    
38.8    
39.0    
39.2    
39.4    
39.6    
39.8    
40.0    
40.2    
40.4    
40.6    
40.8    
41.0    
41.2    
41.4    
41.6    
41.9    
42.1    
42.3    
42.5    
42.7    
42.9    
43.1    
43.3    
43.5    
43.7    
43.9    
44.1    
44.3    
44.5    
44.7    
44.9    
45.1    
45.3    
45.5    
45.7    
45.9    
46.1    
46.3    
46.5    
46.7    
46.9    
47.1    
47.3    
47.5    
47.7    
47.9    
48.1    
48.3    
48.5    
48.7    
48.9    
49.1    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
50.9    
51.1    
51.3    
51.5    
51.7    
51.9    
52.1    
52.3    
52.5    
52.7    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.7    
54.9    
55.1    
55.3    
55.5    
55.7    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.3    
57.5    
57.7    
57.9    
58.1    
58.4    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.8    
60.0    
60.2    
60.4    
60.6    
60.8    
61.0    
61.2    
61.4    
61.6    
61.8    
62.0    
62.2    
62.4    
62.6    
62.8    
63.0    
63.2    
63.4    
63.6    
63.8    
64.0    
64.2    
64.4    
64.6    
64.8    
65.0    
65.2    
65.4    
65.6    
65.8    
66.0    
66.2    
66.4    
66.6    
66.8    
67.0    
67.2    
67.4    
67.6    
67.8    
68.0    
68.2    
68.4    
68.6    
68.8    
69.0    
69.2    
69.4    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.8    
71.0    
71.2    
71.4    
71.6    
71.8    
72.0    
72.2    
72.4    
72.6    
72.8    
73.0    
73.2    
73.4    
73.6    
73.8    
74.0    
74.2    
74.4    
74.6    
74.8    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
76.9    
77.1    
77.3    
77.5    
77.7    
77.9    
78.1    
78.3    
78.5    
78.7    
78.9    
79.1    
79.3    
79.5    
79.7    
79.9    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.3    
81.5    
81.7    
81.9    
82.1    
82.3    
82.5    
82.7    
82.9    
83.1    
83.3    
83.5    
83.7    
83.9    
84.1    
84.3    
84.5    
84.7    
84.9    
85.1    
85.3    
85.5    
85.7    
85.9    
86.1    
86.3    
86.5    
86.7    
86.9    
87.1    
87.3    
87.5    
87.7    
87.9    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.5    
89.7    
89.9    
90.1    
90.3    
90.5    
90.7    
90.9    
91.1    
91.3    
91.5    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
94.0    
94.2    
94.4    
94.6    
94.8    
95.0    
95.2    
95.4    
95.6    
95.8    
96.0    
96.2    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 26 predictions from path traversal
Error with prediction: snap lend_intergenic: 9240, rend_intergenic: 4859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20300, rend_intergenic: 18710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29635, rend_intergenic: 23582  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38150, rend_intergenic: 31866  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97900, rend_intergenic: 86948  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107051, rend_intergenic: 106484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108641, rend_intergenic: 107907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131560, rend_intergenic: 129730  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138283, rend_intergenic: 135247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155730, rend_intergenic: 139118  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168979, rend_intergenic: 159733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176924, rend_intergenic: 170337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support