-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_21/scaffold_21_6529623-6694625

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for CodingQuarry_transcript_32584-T1
Valid prediction for Augustus_model.g31964.t1
Valid prediction for HiQ_model.g31961.t1
Valid prediction for CodingQuarry_transcript_32582-T1
Valid prediction for Augustus_model.g31967.t1
Valid prediction for GlimmerHMM_glimmerT_47895-T1
Couldn't classify 101962, 102036
Sorry, prediction pasa_asmbl_28680.p1 fails validation.
(GTG)	 TG	101962-102036	GT	AAG
(GTA)	 AG	102171-102305	GT	AGG
(TTT)	 AG	102435-102508	GT	AGG
(CAA)	 AG	102633-102729	TC	GAT
-recovered pasa_asmbl_28680.p1, terminal, 102633, 102729
-recovered pasa_asmbl_28680.p1, internal, 102171, 102305
-recovered pasa_asmbl_28680.p1, internal, 102435, 102508
Valid prediction for snap_scaffold_21-snap.1329-T1
Valid prediction for snap_scaffold_21-snap.1360-T1
Couldn't classify 86761, 87325
Sorry, prediction pasa_asmbl_28674.p1 fails validation.
(AGT)	 AG	86761-87325	GT	AGG
(GTG)	 AG	87495-87991	GT	AGG
(ATT)	 AG	88071-88250	GT	AGG
(ATC)	 AG	88343-88584	GT	AGG
(GAA)	 AG	88670-88801	GT	AAG
(CCA)	 AG	88897-89230	GT	CGG
(GTT)	 AG	89375-89578	CT	AAC
-recovered pasa_asmbl_28674.p1, terminal, 89375, 89578
-recovered pasa_asmbl_28674.p1, internal, 86761, 87325
-recovered pasa_asmbl_28674.p1, internal, 87495, 87991
-recovered pasa_asmbl_28674.p1, internal, 88071, 88250
-recovered pasa_asmbl_28674.p1, internal, 88343, 88584
-recovered pasa_asmbl_28674.p1, internal, 88670, 88801
-recovered pasa_asmbl_28674.p1, internal, 88897, 89230
Valid prediction for snap_scaffold_21-snap.1368-T1
Valid prediction for snap_scaffold_21-snap.1348-T1
Couldn't classify 123449, 123772
Sorry, prediction pasa_asmbl_28687.p1 fails validation.
(GTC)	 CT	123449-123772	AG	GAA
Couldn't classify 87710, 88093
Sorry, prediction pasa_asmbl_28672.p4 fails validation.
(GAG)	 GG	87710-88093	GT	AAG
Couldn't classify 119382, 119638
Couldn't classify 123009, 123397
Sorry, prediction pasa_asmbl_28686.p1 fails validation.
(CCA)	 AT	119382-119638	GT	GGG
(AGC)	 AG	119766-119807	GT	AGG
(GCG)	 AG	120037-120148	GT	AGG
(ACT)	 AG	122736-122928	GT	AGG
(AAG)	 AG	123009-123397	AC	CCA
-recovered pasa_asmbl_28686.p1, internal, 119766, 119807
-recovered pasa_asmbl_28686.p1, internal, 120037, 120148
-recovered pasa_asmbl_28686.p1, internal, 122736, 122928
Valid prediction for Augustus_model.g31955.t1
Valid prediction for snap_scaffold_21-snap.1371-T1
Valid prediction for HiQ_model.g31970.t1
Valid prediction for GlimmerHMM_glimmerT_47894-T1
Valid prediction for snap_scaffold_21-snap.1336-T1
Valid prediction for GlimmerHMM_glimmerT_47901-T1
Valid prediction for CodingQuarry_transcript_32586-T1
Valid prediction for HiQ_model.g31952.t1
Valid prediction for snap_scaffold_21-snap.1355-T1
Valid prediction for GlimmerHMM_glimmerT_47889-T1
Valid prediction for GlimmerHMM_glimmerT_47883-T1
Valid prediction for HiQ_model.g31969.t1
Valid prediction for GlimmerHMM_glimmerT_47897-T1
Valid prediction for snap_scaffold_21-snap.1345-T1
Valid prediction for snap_scaffold_21-snap.1331-T1
Valid prediction for pasa_asmbl_28662.p1
Valid prediction for snap_scaffold_21-snap.1334-T1
Valid prediction for GlimmerHMM_glimmerT_47913-T1
Couldn't classify 55353, 55395
Sorry, prediction pasa_asmbl_28667.p1 fails validation.
(ATT)	 TC	55353-55395	GT	AGG
(ACC)	 AG	55859-55973	GT	AGG
(GTT)	 AG	56118-56208	GT	GGG
(CTG)	 AG	56441-56548	GT	AGG
(GAC)	 AG	56688-56779	GT	GAG
(GTC)	 AG	57579-57653	GT	AAG
(CTC)	 AG	59010-59039	GT	AGG
(TAT)	 AG	59169-59251	GT	CAG
(ATC)	 AG	59427-59551	CA	GAC
-recovered pasa_asmbl_28667.p1, terminal, 59427, 59551
-recovered pasa_asmbl_28667.p1, internal, 55859, 55973
-recovered pasa_asmbl_28667.p1, internal, 56118, 56208
-recovered pasa_asmbl_28667.p1, internal, 56441, 56548
-recovered pasa_asmbl_28667.p1, internal, 56688, 56779
-recovered pasa_asmbl_28667.p1, internal, 57579, 57653
-recovered pasa_asmbl_28667.p1, internal, 59010, 59039
-recovered pasa_asmbl_28667.p1, internal, 59169, 59251
Valid prediction for snap_scaffold_21-snap.1341-T1
Valid prediction for GlimmerHMM_glimmerT_47881-T1
Valid prediction for Augustus_model.g31957.t1
Valid prediction for CodingQuarry_transcript_32590-T1
Valid prediction for GlimmerHMM_glimmerT_47877-T1
Valid prediction for GlimmerHMM_glimmerT_47886-T1
Valid prediction for GlimmerHMM_glimmerT_47898-T1
Valid prediction for CodingQuarry_transcript_32581-T1
Valid prediction for GlimmerHMM_glimmerT_47896-T1
Valid prediction for HiQ_model.g31962.t1
Valid prediction for snap_scaffold_21-snap.1333-T1
Valid prediction for Augustus_model.g31966.t1
Valid prediction for snap_scaffold_21-snap.1346-T1
Valid prediction for snap_scaffold_21-snap.1353-T1
Valid prediction for snap_scaffold_21-snap.1366-T1
Valid prediction for GlimmerHMM_glimmerT_47885-T1
Valid prediction for snap_scaffold_21-snap.1339-T1
Valid prediction for GlimmerHMM_glimmerT_47900-T1
Valid prediction for snap_scaffold_21-snap.1351-T1
Valid prediction for GlimmerHMM_glimmerT_47892-T1
Valid prediction for Augustus_model.g31960.t1
Valid prediction for pasa_asmbl_28682.p1
Valid prediction for GlimmerHMM_glimmerT_47880-T1
Valid prediction for Augustus_model.g31968.t1
Valid prediction for GlimmerHMM_glimmerT_47902-T1
Valid prediction for snap_scaffold_21-snap.1352-T1
Valid prediction for snap_scaffold_21-snap.1358-T1
Valid prediction for pasa_asmbl_28670.p1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_47914-T1
Valid prediction for CodingQuarry_transcript_32588-T1
Valid prediction for snap_scaffold_21-snap.1337-T1
Valid prediction for snap_scaffold_21-snap.1367-T1
Sorry, intron length (5) is less than minimum required (10)
Sorry, intron length (5) is less than minimum required (10)
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for snap_scaffold_21-snap.1349-T1
Valid prediction for GlimmerHMM_glimmerT_47879-T1
Valid prediction for snap_scaffold_21-snap.1347-T1
Valid prediction for snap_scaffold_21-snap.1369-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_47906-T1
Valid prediction for Augustus_model.g31974.t1
Valid prediction for GlimmerHMM_glimmerT_47893-T1
Valid prediction for Augustus_model.g31963.t1
Valid prediction for GlimmerHMM_glimmerT_47912-T1
Valid prediction for GlimmerHMM_glimmerT_47876-T1
Valid prediction for GlimmerHMM_glimmerT_47891-T1
Valid prediction for Augustus_model.g31959.t1
Valid prediction for snap_scaffold_21-snap.1338-T1
Valid prediction for snap_scaffold_21-snap.1343-T1
Couldn't classify 135331, 135361
Sorry, prediction pasa_asmbl_27731.p1 fails validation.
(CAT)	 AC	135331-135361	GT	AGG
(GGG)	 AG	135442-135597	GT	CTG
(ACG)	 AG	135713-135956	GT	AGG
(GGT)	 AG	136087-136187	GT	AGG
(ATA)	 AG	136270-136391	AC	AAA
-recovered pasa_asmbl_27731.p1, terminal, 136270, 136391
-recovered pasa_asmbl_27731.p1, internal, 135442, 135597
-recovered pasa_asmbl_27731.p1, internal, 135713, 135956
-recovered pasa_asmbl_27731.p1, internal, 136087, 136187
Valid prediction for snap_scaffold_21-snap.1361-T1
Valid prediction for HiQ_model.g31965.t1
Valid prediction for HiQ_model.g31954.t1
Valid prediction for Augustus_model.g31975.t1
Valid prediction for snap_scaffold_21-snap.1335-T1
Valid prediction for Augustus_model.g31953.t1
Valid prediction for GlimmerHMM_glimmerT_47908-T1
Valid prediction for snap_scaffold_21-snap.1328-T1
Valid prediction for GlimmerHMM_glimmerT_47875-T1
Valid prediction for GlimmerHMM_glimmerT_47888-T1
Valid prediction for Augustus_model.g31956.t1
Valid prediction for snap_scaffold_21-snap.1364-T1
Valid prediction for GlimmerHMM_glimmerT_47904-T1
Valid prediction for snap_scaffold_21-snap.1365-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for CodingQuarry_transcript_32583-T1
Valid prediction for Augustus_model.g31958.t1
Valid prediction for snap_scaffold_21-snap.1372-T1
Valid prediction for snap_scaffold_21-snap.1330-T1
Valid prediction for GlimmerHMM_glimmerT_47903-T1
Valid prediction for GlimmerHMM_glimmerT_47907-T1
Valid prediction for GlimmerHMM_glimmerT_47890-T1
Valid prediction for HiQ_model.g31951.t1
Valid prediction for CodingQuarry_transcript_32591-T1
Valid prediction for snap_scaffold_21-snap.1363-T1
Couldn't classify 100082, 100156
Sorry, prediction CodingQuarry_transcript_32585-T1 fails validation.
(ATG)	 GC	100082-100156	GA	AGG
(AGG)	 AG	100181-100270	GG	GAG
-recovered CodingQuarry_transcript_32585-T1, terminal, 100181, 100270
Valid prediction for GlimmerHMM_glimmerT_47905-T1
Couldn't classify 82076, 82360
Couldn't classify 82760, 82792
Sorry, prediction CodingQuarry_transcript_32587-T1 fails validation.
(ATG)	 GC	80411-80413	GT	TGG
(AGT)	 AG	80753-81928	GT	AGG
(GCC)	 AG	82076-82360	AG	TCA
(GGA)	 CA	82760-82792	GT	GAG
-recovered CodingQuarry_transcript_32587-T1, initial, 80411, 80413
-recovered CodingQuarry_transcript_32587-T1, internal, 80753, 81928
Valid prediction for GlimmerHMM_glimmerT_47878-T1
Valid prediction for GlimmerHMM_glimmerT_47910-T1
Valid prediction for snap_scaffold_21-snap.1356-T1
Valid prediction for snap_scaffold_21-snap.1342-T1
Valid prediction for snap_scaffold_21-snap.1350-T1
Valid prediction for Augustus_model.g31971.t1
Couldn't classify 28213, 28484
Sorry, prediction pasa_asmbl_27741.p1 fails validation.
(ATA)	 AG	28213-28484	GT	CTG
(ACG)	 AG	28622-28811	GT	AGG
(GTG)	 AG	28986-29072	GT	AGG
(GTG)	 AG	29206-29337	GT	TGG
(GAC)	 AG	29485-29544	GT	TGG
(GCA)	 AG	29713-29778	GT	AGG
(AAC)	 AG	29911-30097	GT	TGG
(GAA)	 AG	30187-30242	GT	AGG
(GTG)	 AG	30440-30597	GT	CGG
(TCC)	 AG	30750-31317	TT	GAT
-recovered pasa_asmbl_27741.p1, terminal, 30750, 31317
-recovered pasa_asmbl_27741.p1, internal, 28213, 28484
-recovered pasa_asmbl_27741.p1, internal, 28622, 28811
-recovered pasa_asmbl_27741.p1, internal, 28986, 29072
-recovered pasa_asmbl_27741.p1, internal, 29206, 29337
-recovered pasa_asmbl_27741.p1, internal, 29485, 29544
-recovered pasa_asmbl_27741.p1, internal, 29713, 29778
-recovered pasa_asmbl_27741.p1, internal, 29911, 30097
-recovered pasa_asmbl_27741.p1, internal, 30187, 30242
-recovered pasa_asmbl_27741.p1, internal, 30440, 30597
Valid prediction for GlimmerHMM_glimmerT_47887-T1
Valid prediction for Augustus_model.g31973.t1
Valid prediction for snap_scaffold_21-snap.1354-T1
Valid prediction for snap_scaffold_21-snap.1357-T1
Valid prediction for pasa_asmbl_27736.p1
Valid prediction for snap_scaffold_21-snap.1332-T1
Valid prediction for GlimmerHMM_glimmerT_47884-T1
Valid prediction for snap_scaffold_21-snap.1340-T1
Valid prediction for GlimmerHMM_glimmerT_47882-T1
Couldn't classify 37843, 37872
Sorry, prediction pasa_asmbl_27739.p1 fails validation.
(CCA)	 CG	37843-37872	GT	AGG
(ATC)	 AG	38001-38102	GT	AGG
(GAC)	 AG	38210-38306	GT	TGG
(TGG)	 AG	38421-38583	GT	AGG
(TCT)	 AG	38725-38827	GT	AGG
(TTG)	 AG	38979-39050	TT	GAT
-recovered pasa_asmbl_27739.p1, terminal, 38979, 39050
-recovered pasa_asmbl_27739.p1, internal, 38001, 38102
-recovered pasa_asmbl_27739.p1, internal, 38210, 38306
-recovered pasa_asmbl_27739.p1, internal, 38421, 38583
-recovered pasa_asmbl_27739.p1, internal, 38725, 38827
Valid prediction for Augustus_model.g31972.t1
Valid prediction for GlimmerHMM_glimmerT_47899-T1
Valid prediction for snap_scaffold_21-snap.1359-T1
Valid prediction for snap_scaffold_21-snap.1370-T1
Valid prediction for GlimmerHMM_glimmerT_47909-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for snap_scaffold_21-snap.1344-T1
Valid prediction for snap_scaffold_21-snap.1327-T1
Couldn't classify 146621, 146718
Sorry, prediction pasa_asmbl_27729.p1 fails validation.
(GTC)	 CA	146621-146718	GT	AGG
(AAT)	 AG	147317-147479	GT	AAG
(AGC)	 AG	147725-147956	GT	TGG
(GCA)	 AG	149199-149284	GT	AGG
(GAG)	 AG	149515-149723	GT	CGG
(ACG)	 AG	150164-150281	GT	AGG
(GCT)	 AG	150408-150549	GT	AGG
(CCC)	 AG	150742-150908	GT	AGG
(GTG)	 AG	151021-151120	GT	GGG
(GTA)	 AG	151211-151449	GT	AGG
(AGA)	 AG	151658-151672	GG	GAG
add_exon() Sorry, pasa_asmbl_27729.p1 150408-150549-terminal-3 is invalid.
-recovered pasa_asmbl_27729.p1, terminal, 150408, 150549
-recovered pasa_asmbl_27729.p1, terminal, 151658, 151672
-recovered pasa_asmbl_27729.p1, internal, 147317, 147479
-recovered pasa_asmbl_27729.p1, internal, 147725, 147956
-recovered pasa_asmbl_27729.p1, internal, 149199, 149284
-recovered pasa_asmbl_27729.p1, internal, 149515, 149723
-recovered pasa_asmbl_27729.p1, internal, 150164, 150281
-recovered pasa_asmbl_27729.p1, internal, 150408, 150549
-recovered pasa_asmbl_27729.p1, internal, 150742, 150908
-recovered pasa_asmbl_27729.p1, internal, 151021, 151120
-recovered pasa_asmbl_27729.p1, internal, 151211, 151449
Valid prediction for GlimmerHMM_glimmerT_47911-T1
Valid prediction for pasa_asmbl_27728.p1
Valid prediction for Augustus_model.g31976.t1
Valid prediction for snap_scaffold_21-snap.1362-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15896, rend_intergenic: 13202  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30100, rend_intergenic: 24842  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39865, rend_intergenic: 36540  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46170, rend_intergenic: 42314  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77329, rend_intergenic: 73738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81023, rend_intergenic: 79289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87982, rend_intergenic: 85458  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102729, rend_intergenic: 94222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116060, rend_intergenic: 106845  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124183, rend_intergenic: 121505  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128437, rend_intergenic: 125954  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154104, rend_intergenic: 151543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157918, rend_intergenic: 154296  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163221, rend_intergenic: 160877  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 157844, rend_intergenic: 157841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 165003
-exon list size: 582


building trellis

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47.3    
47.4    
47.6    
47.8    
47.9    
48.1    
48.3    
48.5    
48.6    
48.8    
49.0    
49.1    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.9    
51.0    
51.2    
51.4    
51.5    
51.7    
51.9    
52.1    
52.2    
52.4    
52.6    
52.7    
52.9    
53.1    
53.3    
53.4    
53.6    
53.8    
53.9    
54.1    
54.3    
54.5    
54.6    
54.8    
55.0    
55.1    
55.3    
55.5    
55.7    
55.8    
56.0    
56.2    
56.3    
56.5    
56.7    
56.8    
57.0    
57.2    
57.4    
57.5    
57.7    
57.9    
58.0    
58.2    
58.4    
58.6    
58.7    
58.9    
59.1    
59.2    
59.4    
59.6    
59.8    
59.9    
60.1    
60.3    
60.4    
60.6    
60.8    
61.0    
61.1    
61.3    
61.5    
61.6    
61.8    
62.0    
62.2    
62.3    
62.5    
62.7    
62.8    
63.0    
63.2    
63.4    
63.5    
63.7    
63.9    
64.0    
64.2    
64.4    
64.6    
64.7    
64.9    
65.1    
65.2    
65.4    
65.6    
65.8    
65.9    
66.1    
66.3    
66.4    
66.6    
66.8    
67.0    
67.1    
67.3    
67.5    
67.6    
67.8    
68.0    
68.2    
68.3    
68.5    
68.7    
68.8    
69.0    
69.2    
69.3    
69.5    
69.7    
69.9    
70.0    
70.2    
70.4    
70.5    
70.7    
70.9    
71.1    
71.2    
71.4    
71.6    
71.7    
71.9    
72.1    
72.3    
72.4    
72.6    
72.8    
72.9    
73.1    
73.3    
73.5    
73.6    
73.8    
74.0    
74.1    
74.3    
74.5    
74.7    
74.8    
75.0    
75.2    
75.3    
75.5    
75.7    
75.9    
76.0    
76.2    
76.4    
76.5    
76.7    
76.9    
77.1    
77.2    
77.4    
77.6    
77.7    
77.9    
78.1    
78.3    
78.4    
78.6    
78.8    
78.9    
79.1    
79.3    
79.5    
79.6    
79.8    
80.0    
80.1    
80.3    
80.5    
80.7    
80.8    
81.0    
81.2    
81.3    
81.5    
81.7    
81.8    
82.0    
82.2    
82.4    
82.5    
82.7    
82.9    
83.0    
83.2    
83.4    
83.6    
83.7    
83.9    
84.1    
84.2    
84.4    
84.6    
84.8    
84.9    
85.1    
85.3    
85.4    
85.6    
85.8    
86.0    
86.1    
86.3    
86.5    
86.6    
86.8    
87.0    
87.2    
87.3    
87.5    
87.7    
87.8    
88.0    
88.2    
88.4    
88.5    
88.7    
88.9    
89.0    
89.2    
89.4    
89.6    
89.7    
89.9    
90.1    
90.2    
90.4    
90.6    
90.8    
90.9    
91.1    
91.3    
91.4    
91.6    
91.8    
92.0    
92.1    
92.3    
92.5    
92.6    
92.8    
93.0    
93.2    
93.3    
93.5    
93.7    
93.8    
94.0    
94.2    
94.3    
94.5    
94.7    
94.9    
95.0    
95.2    
95.4    
95.5    
95.7    
95.9    
96.1    
96.2    
96.4    
96.6    
96.7    
96.9    
97.1    
97.3    
97.4    
97.6    
97.8    
97.9    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.1    
99.3    
99.5    
99.7    
99.8    
-found 36 predictions from path traversal
Error with prediction: snap lend_intergenic: 15896, rend_intergenic: 13202  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30100, rend_intergenic: 24842  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39865, rend_intergenic: 36540  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46170, rend_intergenic: 42314  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77329, rend_intergenic: 73738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81023, rend_intergenic: 79289  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87982, rend_intergenic: 85458  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102729, rend_intergenic: 94222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116060, rend_intergenic: 106845  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124183, rend_intergenic: 121505  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128437, rend_intergenic: 125954  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154104, rend_intergenic: 151543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157918, rend_intergenic: 154296  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163221, rend_intergenic: 160877  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 157844, rend_intergenic: 157841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 35 predictions persist after filtering for low support