-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2092

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1130, 1292
Sorry, prediction snap_scaffold_2092-snap.2-T1 fails validation.
(ATG)	 CG	166-197	GT	GGG
(AGT)	 AG	1130-1292	GT	ATG
-recovered snap_scaffold_2092-snap.2-T1, initial, 166, 197
-recovered snap_scaffold_2092-snap.2-T1, internal, 1130, 1292

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 285, 440
Sorry, prediction GlimmerHMM_glimmerT_61467-T1 fails validation.
(GTC)	 AG	285-440	GT	CGG
(GTA)	 AG	1278-1456	AC	AAA
-recovered GlimmerHMM_glimmerT_61467-T1, terminal, 1278, 1456
-recovered GlimmerHMM_glimmerT_61467-T1, internal, 285, 440
Couldn't classify 285, 440
Couldn't classify 1278, 1452
Sorry, prediction Augustus_model.g40767.t1 fails validation.
(GTC)	 AG	285-440	GT	CGG
(GTA)	 AG	1278-1452	GT	AGG
-recovered Augustus_model.g40767.t1, internal, 285, 440
-recovered Augustus_model.g40767.t1, internal, 1278, 1452
Couldn't classify 285, 440
Couldn't classify 1278, 1452
Sorry, prediction snap_scaffold_2092-snap.1-T1 fails validation.
(GTC)	 AG	285-440	GT	CGG
(GTA)	 AG	1278-1452	GT	AGG
-recovered snap_scaffold_2092-snap.1-T1, internal, 285, 440
-recovered snap_scaffold_2092-snap.1-T1, internal, 1278, 1452

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 1309, rend_intergenic: 166  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 1593
-exon list size: 8


building trellis

10.0    
20.0    
30.0    
40.0    
50.0    
60.0    
70.0    
80.0    
90.0    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 1309, rend_intergenic: 166  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support