-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_20/scaffold_20_3731997-3983571

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_20-snap.806-T1
Couldn't classify 55523, 55588
Couldn't classify 56711, 56780
Sorry, prediction pasa_asmbl_27199.p1 fails validation.
(GGG)	 CA	55523-55588	GT	GAG
(GTG)	 AG	55865-55993	GT	CGG
(ATC)	 AG	56227-56342	GT	AAG
(GAA)	 AG	56711-56780	AG	CGA
-recovered pasa_asmbl_27199.p1, internal, 55865, 55993
-recovered pasa_asmbl_27199.p1, internal, 56227, 56342
Valid prediction for snap_scaffold_20-snap.822-T1
Valid prediction for snap_scaffold_20-snap.818-T1
Valid prediction for snap_scaffold_20-snap.827-T1
Valid prediction for snap_scaffold_20-snap.785-T1
Valid prediction for snap_scaffold_20-snap.804-T1
Valid prediction for snap_scaffold_20-snap.780-T1
Valid prediction for snap_scaffold_20-snap.778-T1
Valid prediction for GlimmerHMM_glimmerT_45773-T1
Couldn't classify 175735, 176917
Sorry, prediction pasa_asmbl_26547.p1 fails validation.
(TCT)	 TT	175735-176917	GT	AGG
(GAA)	 AG	177993-178085	GT	AGG
(CTG)	 AG	178814-178909	GT	AGG
(ATG)	 AG	179454-179571	GT	AGG
(GGG)	 AG	179715-179948	GT	AGG
(GAT)	 AG	180327-180672	CC	AAC
-recovered pasa_asmbl_26547.p1, initial, 179454, 179571
-recovered pasa_asmbl_26547.p1, terminal, 180327, 180672
-recovered pasa_asmbl_26547.p1, internal, 177993, 178085
-recovered pasa_asmbl_26547.p1, internal, 178814, 178909
-recovered pasa_asmbl_26547.p1, internal, 179454, 179571
-recovered pasa_asmbl_26547.p1, internal, 179715, 179948
Valid prediction for snap_scaffold_20-snap.789-T1
Valid prediction for GlimmerHMM_glimmerT_45797-T1
Valid prediction for Augustus_model.g30417.t1
Valid prediction for snap_scaffold_20-snap.786-T1
Valid prediction for GlimmerHMM_glimmerT_45786-T1
Valid prediction for GlimmerHMM_glimmerT_45800-T1
Valid prediction for Augustus_model.g30414.t1
Valid prediction for snap_scaffold_20-snap.814-T1
Couldn't classify 248191, 249288
Sorry, prediction pasa_asmbl_26556.p1 fails validation.
(GGA)	 CA	248191-249288	CG	AGC
Couldn't classify 232940, 232959
Couldn't classify 233609, 233637
Sorry, prediction pasa_asmbl_26552.p1 fails validation.
(AAC)	 GC	232940-232959	GT	CTG
(AGT)	 AG	233057-233174	GT	GGG
(GAT)	 AG	233328-233508	GT	GAG
(ATG)	 AG	233609-233637	AA	TGA
-recovered pasa_asmbl_26552.p1, internal, 233057, 233174
-recovered pasa_asmbl_26552.p1, internal, 233328, 233508
Valid prediction for snap_scaffold_20-snap.800-T1
Valid prediction for snap_scaffold_20-snap.783-T1
Valid prediction for GlimmerHMM_glimmerT_45777-T1
Valid prediction for GlimmerHMM_glimmerT_45790-T1
Valid prediction for Augustus_model.g30415.t1
Valid prediction for snap_scaffold_20-snap.791-T1
Valid prediction for Augustus_model.g30413.t1
Valid prediction for GlimmerHMM_glimmerT_45783-T1
Valid prediction for GlimmerHMM_glimmerT_45772-T1
Valid prediction for snap_scaffold_20-snap.816-T1
Valid prediction for GlimmerHMM_glimmerT_45804-T1
Valid prediction for snap_scaffold_20-snap.801-T1
Valid prediction for snap_scaffold_20-snap.805-T1
Couldn't classify 178814, 178911
Couldn't classify 179457, 179571
Sorry, prediction CodingQuarry_transcript_30485-T1 fails validation.
(ATG)	 AC	177935-178085	GT	AGG
(CTG)	 AG	178814-178911	AA	GTA
(GAG)	 TG	179457-179571	GT	AGG
(GGG)	 AG	179715-179948	GT	AGG
(GAT)	 AG	180327-180676	GT	AGG
(GTC)	 AG	180994-181662	AG	AGA
-recovered CodingQuarry_transcript_30485-T1, initial, 177935, 178085
-recovered CodingQuarry_transcript_30485-T1, terminal, 180994, 181662
-recovered CodingQuarry_transcript_30485-T1, internal, 179715, 179948
-recovered CodingQuarry_transcript_30485-T1, internal, 180327, 180676
Valid prediction for GlimmerHMM_glimmerT_45795-T1
Valid prediction for Augustus_model.g30406.t1
Couldn't classify 203929, 204237
Couldn't classify 206259, 206333
Sorry, prediction pasa_asmbl_26549.p1 fails validation.
(TTT)	 GC	203929-204237	GT	AGG
(TGT)	 AG	204621-204722	GT	AGG
(TTC)	 AG	205072-205343	GT	AGG
(TCT)	 AG	205909-206011	GT	AGG
(GTG)	 AG	206259-206333	TC	GCT
-recovered pasa_asmbl_26549.p1, internal, 204621, 204722
-recovered pasa_asmbl_26549.p1, internal, 205072, 205343
-recovered pasa_asmbl_26549.p1, internal, 205909, 206011
Valid prediction for snap_scaffold_20-snap.812-T1
Valid prediction for GlimmerHMM_glimmerT_45782-T1
Valid prediction for snap_scaffold_20-snap.820-T1
Couldn't classify 178814, 178911
Couldn't classify 179457, 179571
Sorry, prediction CodingQuarry_transcript_30484-T1 fails validation.
(ATG)	 TG	175834-176917	GT	AGG
(CAG)	 AG	177990-178085	GT	AGG
(CTG)	 AG	178814-178911	AA	GTA
(GAG)	 TG	179457-179571	GT	AGG
(GGG)	 AG	179715-179948	GT	AGG
(GAT)	 AG	180327-180676	GT	AGG
(GTC)	 AG	180994-181662	AG	AGA
-recovered CodingQuarry_transcript_30484-T1, initial, 175834, 176917
-recovered CodingQuarry_transcript_30484-T1, terminal, 180994, 181662
-recovered CodingQuarry_transcript_30484-T1, internal, 177990, 178085
-recovered CodingQuarry_transcript_30484-T1, internal, 179715, 179948
-recovered CodingQuarry_transcript_30484-T1, internal, 180327, 180676
Valid prediction for GlimmerHMM_glimmerT_45805-T1
Couldn't classify 211867, 212652
Sorry, prediction pasa_asmbl_26550.p1 fails validation.
(TTC)	 AC	211867-212652	TC	GAT
Valid prediction for GlimmerHMM_glimmerT_45781-T1
Valid prediction for snap_scaffold_20-snap.823-T1
Valid prediction for GlimmerHMM_glimmerT_45799-T1
Valid prediction for GlimmerHMM_glimmerT_45778-T1
Couldn't classify 240336, 240659
Couldn't classify 240770, 240856
Sorry, prediction pasa_asmbl_26553.p1 fails validation.
(CTC)	 AC	240336-240659	GT	AGG
(ACG)	 AG	240770-240856	GA	TGG
Couldn't classify 240929, 240938
Couldn't classify 247063, 247098
Sorry, prediction pasa_asmbl_26554.p1 fails validation.
(CGG)	 CC	240929-240938	GT	GAG
(TCT)	 AG	241149-241267	GT	CTG
(GAT)	 AG	241368-241607	GT	AGG
(TAT)	 AG	241752-241840	GT	AGG
(GTA)	 AG	242303-242383	GT	ACG
(GAT)	 AG	242810-242866	GT	CCG
(GTT)	 AG	243404-243481	GT	GGG
(ATT)	 AG	243705-243772	GT	AAG
(GGC)	 AG	244348-244498	GT	AGG
(GTT)	 AG	244724-244870	GT	AGG
(ACG)	 AG	245083-245196	GT	GGG
(GTA)	 AG	245347-245512	GT	AGG
(GAC)	 AG	245785-245952	GT	AGG
(GGC)	 AG	246148-246309	GT	AGG
(GTG)	 AG	246594-246875	GT	AGG
(GAC)	 AG	247063-247098	GG	AGG
-recovered pasa_asmbl_26554.p1, internal, 241149, 241267
-recovered pasa_asmbl_26554.p1, internal, 241368, 241607
-recovered pasa_asmbl_26554.p1, internal, 241752, 241840
-recovered pasa_asmbl_26554.p1, internal, 242303, 242383
-recovered pasa_asmbl_26554.p1, internal, 242810, 242866
-recovered pasa_asmbl_26554.p1, internal, 243404, 243481
-recovered pasa_asmbl_26554.p1, internal, 243705, 243772
-recovered pasa_asmbl_26554.p1, internal, 244348, 244498
-recovered pasa_asmbl_26554.p1, internal, 244724, 244870
-recovered pasa_asmbl_26554.p1, internal, 245083, 245196
-recovered pasa_asmbl_26554.p1, internal, 245347, 245512
-recovered pasa_asmbl_26554.p1, internal, 245785, 245952
-recovered pasa_asmbl_26554.p1, internal, 246148, 246309
-recovered pasa_asmbl_26554.p1, internal, 246594, 246875
Valid prediction for CodingQuarry_transcript_30486-T1
Couldn't classify 178814, 178911
Couldn't classify 179457, 179571
Sorry, prediction CodingQuarry_transcript_30483-T1 fails validation.
(ATG)	 TG	175834-176574	GT	AGG
(GTG)	 AG	176614-176917	GT	AGG
(CAG)	 AG	177990-178085	GT	AGG
(CTG)	 AG	178814-178911	AA	GTA
(GAG)	 TG	179457-179571	GT	AGG
(GGG)	 AG	179715-179948	GT	AGG
(GAT)	 AG	180327-180676	GT	AGG
(GTC)	 AG	180994-181662	AG	AGA
-recovered CodingQuarry_transcript_30483-T1, initial, 175834, 176574
-recovered CodingQuarry_transcript_30483-T1, terminal, 180994, 181662
-recovered CodingQuarry_transcript_30483-T1, internal, 176614, 176917
-recovered CodingQuarry_transcript_30483-T1, internal, 177990, 178085
-recovered CodingQuarry_transcript_30483-T1, internal, 179715, 179948
-recovered CodingQuarry_transcript_30483-T1, internal, 180327, 180676
Couldn't classify 51899, 52118
Couldn't classify 54100, 54252
Sorry, prediction pasa_asmbl_26543.p1 fails validation.
(AGT)	 AC	51899-52118	GT	TGG
(GAG)	 AG	52664-52803	GT	AGG
(ATG)	 AG	53137-53220	GT	AGG
(GTT)	 AG	53592-53804	GT	AGG
(TTT)	 AG	54100-54252	GT	TGG
-recovered pasa_asmbl_26543.p1, initial, 53137, 53220
-recovered pasa_asmbl_26543.p1, internal, 52664, 52803
-recovered pasa_asmbl_26543.p1, internal, 53137, 53220
-recovered pasa_asmbl_26543.p1, internal, 53592, 53804
-recovered pasa_asmbl_26543.p1, internal, 54100, 54252
Valid prediction for Augustus_model.g30408.t1
Valid prediction for GlimmerHMM_glimmerT_45775-T1
Valid prediction for snap_scaffold_20-snap.795-T1
Valid prediction for Augustus_model.g30404.t1
Valid prediction for GlimmerHMM_glimmerT_45801-T1
Valid prediction for snap_scaffold_20-snap.794-T1
Valid prediction for GlimmerHMM_glimmerT_45802-T1
Valid prediction for snap_scaffold_20-snap.798-T1
Valid prediction for snap_scaffold_20-snap.811-T1
Valid prediction for snap_scaffold_20-snap.787-T1
Couldn't classify 247243, 247554
Sorry, prediction pasa_asmbl_26555.p1 fails validation.
(TGC)	 AG	247243-247554	AG	CCA
Valid prediction for GlimmerHMM_glimmerT_45771-T1
Valid prediction for Augustus_model.g30402.t1
Valid prediction for Augustus_model.g30416.t1
Valid prediction for snap_scaffold_20-snap.810-T1
Valid prediction for Augustus_model.g30405.t1
Valid prediction for snap_scaffold_20-snap.817-T1
Couldn't classify 224728, 224997
Couldn't classify 227641, 227685
Sorry, prediction pasa_asmbl_26551.p1 fails validation.
(AAC)	 AG	224728-224997	GT	AGG
(ATG)	 AG	227641-227685	TA	GGT
-recovered pasa_asmbl_26551.p1, internal, 224728, 224997
Valid prediction for GlimmerHMM_glimmerT_45779-T1
Valid prediction for Augustus_model.g30418.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g30407.t1
Valid prediction for snap_scaffold_20-snap.829-T1
Valid prediction for snap_scaffold_20-snap.819-T1
Valid prediction for snap_scaffold_20-snap.797-T1
Valid prediction for GlimmerHMM_glimmerT_45794-T1
Valid prediction for GlimmerHMM_glimmerT_45785-T1
Valid prediction for snap_scaffold_20-snap.821-T1
Couldn't classify 108424, 108504
Couldn't classify 109587, 109846
Sorry, prediction pasa_asmbl_25708.p1 fails validation.
(GTG)	 CC	108424-108504	GT	GGG
(TGC)	 AG	108829-108962	GT	AGG
(GTA)	 AG	109280-109398	GT	AGG
(GAG)	 AG	109587-109846	CC	AGC
-recovered pasa_asmbl_25708.p1, internal, 108829, 108962
-recovered pasa_asmbl_25708.p1, internal, 109280, 109398
Valid prediction for Augustus_model.g30411.t1
Valid prediction for GlimmerHMM_glimmerT_45780-T1
Valid prediction for Augustus_model.g30412.t1
Valid prediction for GlimmerHMM_glimmerT_45788-T1
Valid prediction for snap_scaffold_20-snap.809-T1
Valid prediction for snap_scaffold_20-snap.790-T1
Valid prediction for snap_scaffold_20-snap.813-T1
Valid prediction for snap_scaffold_20-snap.826-T1
Valid prediction for snap_scaffold_20-snap.824-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for snap_scaffold_20-snap.808-T1
Valid prediction for GlimmerHMM_glimmerT_45774-T1
Valid prediction for GlimmerHMM_glimmerT_45787-T1
Valid prediction for snap_scaffold_20-snap.788-T1
Valid prediction for snap_scaffold_20-snap.796-T1
Valid prediction for GlimmerHMM_glimmerT_45792-T1
Valid prediction for snap_scaffold_20-snap.802-T1
Valid prediction for Augustus_model.g30410.t1
Valid prediction for Augustus_model.g30403.t1
Valid prediction for GlimmerHMM_glimmerT_45803-T1
Valid prediction for snap_scaffold_20-snap.792-T1
Valid prediction for GlimmerHMM_glimmerT_45784-T1
Valid prediction for snap_scaffold_20-snap.793-T1
Valid prediction for snap_scaffold_20-snap.781-T1
Valid prediction for snap_scaffold_20-snap.815-T1
Valid prediction for Augustus_model.g30409.t1
Valid prediction for GlimmerHMM_glimmerT_45789-T1
Valid prediction for snap_scaffold_20-snap.779-T1
Valid prediction for GlimmerHMM_glimmerT_45791-T1
Valid prediction for GlimmerHMM_glimmerT_45796-T1
Valid prediction for GlimmerHMM_glimmerT_45798-T1
Valid prediction for snap_scaffold_20-snap.782-T1
Valid prediction for snap_scaffold_20-snap.803-T1
Valid prediction for GlimmerHMM_glimmerT_45776-T1
Valid prediction for snap_scaffold_20-snap.784-T1
Valid prediction for GlimmerHMM_glimmerT_45793-T1
Valid prediction for snap_scaffold_20-snap.799-T1
Valid prediction for snap_scaffold_20-snap.807-T1
Valid prediction for snap_scaffold_20-snap.825-T1
Valid prediction for snap_scaffold_20-snap.828-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7364, rend_intergenic: 2662  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11260, rend_intergenic: 7456  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20802, rend_intergenic: 11663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51298, rend_intergenic: 22841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54344, rend_intergenic: 52632  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54693, rend_intergenic: 54526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58583, rend_intergenic: 54696  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71746, rend_intergenic: 58694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76049, rend_intergenic: 73001  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79981, rend_intergenic: 76298  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89541, rend_intergenic: 80071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96545, rend_intergenic: 92510  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102795, rend_intergenic: 97242  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119688, rend_intergenic: 103642  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156317, rend_intergenic: 143145  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164527, rend_intergenic: 161222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172528, rend_intergenic: 167217  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181742, rend_intergenic: 175710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193507, rend_intergenic: 187740  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210816, rend_intergenic: 193507  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230529, rend_intergenic: 220694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232195, rend_intergenic: 230573  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 249288, rend_intergenic: 232886  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 251575
-exon list size: 499


building trellis

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46.9    
47.1    
47.3    
47.5    
47.7    
47.9    
48.1    
48.3    
48.5    
48.7    
48.9    
49.1    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
50.9    
51.1    
51.3    
51.5    
51.7    
51.9    
52.1    
52.3    
52.5    
52.7    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.7    
54.9    
55.1    
55.3    
55.5    
55.7    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.3    
57.5    
57.7    
57.9    
58.1    
58.3    
58.5    
58.7    
58.9    
59.1    
59.3    
59.5    
59.7    
59.9    
60.1    
60.3    
60.5    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.9    
62.1    
62.3    
62.5    
62.7    
62.9    
63.1    
63.3    
63.5    
63.7    
63.9    
64.1    
64.3    
64.5    
64.7    
64.9    
65.1    
65.3    
65.5    
65.7    
65.9    
66.1    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.7    
67.9    
68.1    
68.3    
68.5    
68.7    
68.9    
69.1    
69.3    
69.5    
69.7    
69.9    
70.1    
70.3    
70.5    
70.7    
70.9    
71.1    
71.3    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.1    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.6    
75.8    
76.0    
76.2    
76.4    
76.6    
76.8    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.8    
79.0    
79.2    
79.4    
79.6    
79.8    
80.0    
80.2    
80.4    
80.6    
80.8    
81.0    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.8    
83.0    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.8    
86.0    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.6    
87.8    
88.0    
88.2    
88.4    
88.6    
88.8    
89.0    
89.2    
89.4    
89.6    
89.8    
90.0    
90.2    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
94.0    
94.2    
94.4    
94.6    
94.8    
95.0    
95.2    
95.4    
95.6    
95.8    
96.0    
96.2    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 7364, rend_intergenic: 2662  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11260, rend_intergenic: 7456  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20802, rend_intergenic: 11663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51298, rend_intergenic: 22841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54344, rend_intergenic: 52632  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54693, rend_intergenic: 54526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58583, rend_intergenic: 54696  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71746, rend_intergenic: 58694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76049, rend_intergenic: 73001  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79981, rend_intergenic: 76298  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89541, rend_intergenic: 80071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96545, rend_intergenic: 92510  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102795, rend_intergenic: 97242  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119688, rend_intergenic: 103642  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156317, rend_intergenic: 143145  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164527, rend_intergenic: 161222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172528, rend_intergenic: 167217  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181742, rend_intergenic: 175710  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193507, rend_intergenic: 187740  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210816, rend_intergenic: 193507  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230529, rend_intergenic: 220694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232195, rend_intergenic: 230573  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 249288, rend_intergenic: 232886  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 18 predictions persist after filtering for low support