-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2/scaffold_2_17484350-17808937

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g3657.t1
Valid prediction for snap_scaffold_2-snap.3404-T1
Valid prediction for Augustus_model.g3653.t1
Valid prediction for Augustus_model.g3650.t1
Valid prediction for snap_scaffold_2-snap.3407-T1
Valid prediction for Augustus_model.g3660.t1
Valid prediction for snap_scaffold_2-snap.3421-T1
Valid prediction for snap_scaffold_2-snap.3413-T1
Valid prediction for Augustus_model.g3656.t1
Valid prediction for snap_scaffold_2-snap.3427-T1
Valid prediction for CodingQuarry_transcript_28826-T1
Valid prediction for CodingQuarry_transcript_28817-T1
Valid prediction for snap_scaffold_2-snap.3418-T1
Valid prediction for GlimmerHMM_glimmerT_5425-T1
Valid prediction for snap_scaffold_2-snap.3428-T1
Couldn't classify 218803, 218834
Couldn't classify 219828, 219887
Sorry, prediction pasa_asmbl_25451.p1 fails validation.
(AAT)	 CA	218803-218834	GT	AGG
(TGA)	 AG	219363-219495	GT	AAG
(GAC)	 AG	219610-219732	GT	AGG
(GAA)	 AG	219828-219887	AT	TGA
-recovered pasa_asmbl_25451.p1, internal, 219363, 219495
-recovered pasa_asmbl_25451.p1, internal, 219610, 219732
Valid prediction for Augustus_model.g3672.t1
Valid prediction for snap_scaffold_2-snap.3425-T1
Valid prediction for snap_scaffold_2-snap.3448-T1
Couldn't classify 55497, 55643
Sorry, prediction pasa_asmbl_25173.p1 fails validation.
(ATG)	 AA	55149-55385	GT	AGG
(GAA)	 AG	55497-55643	CT	TAC
-recovered pasa_asmbl_25173.p1, initial, 55149, 55385
Valid prediction for pasa_asmbl_25185.p1
Couldn't classify 45696, 45751
Sorry, prediction pasa_asmbl_25452.p1 fails validation.
(GTG)	 CA	45696-45751	GT	AGG
(GTT)	 AG	46028-46143	GT	CAG
(TGG)	 AG	46378-46534	GT	AGG
(GCT)	 AG	46893-46975	GT	GGG
(CTG)	 AG	47115-47300	GT	CAG
(ACT)	 AG	47414-47598	GT	AGG
(GAC)	 AG	48072-48164	GT	CGG
(GTA)	 AG	48567-48659	TC	GAT
-recovered pasa_asmbl_25452.p1, terminal, 48567, 48659
-recovered pasa_asmbl_25452.p1, internal, 46028, 46143
-recovered pasa_asmbl_25452.p1, internal, 46378, 46534
-recovered pasa_asmbl_25452.p1, internal, 46893, 46975
-recovered pasa_asmbl_25452.p1, internal, 47115, 47300
-recovered pasa_asmbl_25452.p1, internal, 47414, 47598
-recovered pasa_asmbl_25452.p1, internal, 48072, 48164
Valid prediction for Augustus_model.g3648.t1
Couldn't classify 44188, 44415
Couldn't classify 45055, 45123
Sorry, prediction pasa_asmbl_25172.p1 fails validation.
(GAG)	 CA	44188-44415	GT	AGG
(ATG)	 AG	44687-44872	GT	CAG
(GAG)	 AG	45055-45123	AA	ACA
-recovered pasa_asmbl_25172.p1, initial, 44687, 44872
-recovered pasa_asmbl_25172.p1, internal, 44687, 44872
Valid prediction for Augustus_model.g3654.t1
Valid prediction for GlimmerHMM_glimmerT_5417-T1
Valid prediction for GlimmerHMM_glimmerT_5441-T1
Valid prediction for Augustus_model.g3664.t1
Couldn't classify 160924, 161062
Couldn't classify 163413, 163520
Sorry, prediction pasa_asmbl_25191.p1 fails validation.
(ATT)	 CT	160924-161062	GT	GGG
(TTC)	 AG	162789-162852	GT	TGG
(GTA)	 AG	162983-163211	GT	CTG
(GTG)	 AG	163413-163520	GT	GGG
-recovered pasa_asmbl_25191.p1, internal, 162789, 162852
-recovered pasa_asmbl_25191.p1, internal, 162983, 163211
-recovered pasa_asmbl_25191.p1, internal, 163413, 163520
Couldn't classify 57240, 57289
Sorry, prediction pasa_asmbl_25174.p1 fails validation.
(TGT)	 TT	57240-57289	GT	CCG
(GGA)	 AG	57475-57601	GT	CAG
(TGC)	 AG	57708-57803	GT	AGG
(CAT)	 AG	58024-58157	GT	AGG
(GGA)	 AG	58292-58466	TC	GAT
-recovered pasa_asmbl_25174.p1, terminal, 58292, 58466
-recovered pasa_asmbl_25174.p1, internal, 57475, 57601
-recovered pasa_asmbl_25174.p1, internal, 57708, 57803
-recovered pasa_asmbl_25174.p1, internal, 58024, 58157
Couldn't classify 95807, 95924
Couldn't classify 99210, 99403
Sorry, prediction pasa_asmbl_25181.p1 fails validation.
(CGG)	 TG	95807-95924	GT	AGG
(GGA)	 AG	96879-97053	GT	AGG
(GAA)	 AG	97214-97331	GT	AGG
(GGA)	 AG	97474-97638	GT	ACG
(AGG)	 AG	97847-98026	GT	GGG
(TGG)	 AG	98863-99016	GT	GGG
(CTA)	 AG	99210-99403	AG	GAA
-recovered pasa_asmbl_25181.p1, internal, 96879, 97053
-recovered pasa_asmbl_25181.p1, internal, 97214, 97331
-recovered pasa_asmbl_25181.p1, internal, 97474, 97638
-recovered pasa_asmbl_25181.p1, internal, 97847, 98026
-recovered pasa_asmbl_25181.p1, internal, 98863, 99016
Couldn't classify 217200, 217356
Sorry, prediction pasa_asmbl_25193.p1 fails validation.
(TAT)	 CA	217200-217356	GT	CAG
(ACA)	 AG	217501-217823	TT	GAT
-recovered pasa_asmbl_25193.p1, terminal, 217501, 217823
Valid prediction for GlimmerHMM_glimmerT_5422-T1
Valid prediction for Augustus_model.g3643.t1
Valid prediction for GlimmerHMM_glimmerT_5421-T1
Couldn't classify 221085, 221177
Couldn't classify 221999, 222073
Sorry, prediction pasa_asmbl_25194.p1 fails validation.
(TTG)	 TC	221085-221177	GT	ATG
(AAA)	 AG	221278-221373	GT	AGG
(TTG)	 AG	221458-221604	GT	GAG
(CAA)	 AG	221703-221813	GT	AGG
(CTA)	 AG	221999-222073	CT	CCC
-recovered pasa_asmbl_25194.p1, internal, 221278, 221373
-recovered pasa_asmbl_25194.p1, internal, 221458, 221604
-recovered pasa_asmbl_25194.p1, internal, 221703, 221813
Valid prediction for Augustus_model.g3651.t1
Valid prediction for GlimmerHMM_glimmerT_5409-T1
Valid prediction for snap_scaffold_2-snap.3412-T1
Valid prediction for snap_scaffold_2-snap.3405-T1
Valid prediction for CodingQuarry_transcript_28816-T1
Valid prediction for snap_scaffold_2-snap.3419-T1
Valid prediction for GlimmerHMM_glimmerT_5428-T1
Valid prediction for snap_scaffold_2-snap.3432-T1
Couldn't classify 237531, 237551
Sorry, prediction pasa_asmbl_25198.p1 fails validation.
(TCT)	 CA	237531-237551	GT	AGG
(AAT)	 AG	237675-237867	GT	AGG
(GTA)	 AG	237991-238232	GT	ACG
(GTC)	 AG	238344-238598	CT	AAC
-recovered pasa_asmbl_25198.p1, terminal, 238344, 238598
-recovered pasa_asmbl_25198.p1, internal, 237675, 237867
-recovered pasa_asmbl_25198.p1, internal, 237991, 238232
Couldn't classify 85814, 85909
Sorry, prediction pasa_asmbl_25180.p1 fails validation.
(GTG)	 GT	85814-85909	GT	CGG
(TTC)	 AG	86070-86144	GT	CTG
(ATC)	 AG	86370-86483	GT	CGG
(CTG)	 AG	86671-86769	GT	CGG
(AGT)	 AG	87015-87098	GT	TGG
(ATA)	 AG	87576-87641	GA	AAG
-recovered pasa_asmbl_25180.p1, terminal, 87576, 87641
-recovered pasa_asmbl_25180.p1, internal, 86070, 86144
-recovered pasa_asmbl_25180.p1, internal, 86370, 86483
-recovered pasa_asmbl_25180.p1, internal, 86671, 86769
-recovered pasa_asmbl_25180.p1, internal, 87015, 87098
Valid prediction for Augustus_model.g3644.t1
Valid prediction for snap_scaffold_2-snap.3424-T1
Valid prediction for HiQ_model.g3642.t1
Valid prediction for snap_scaffold_2-snap.3411-T1
Valid prediction for snap_scaffold_2-snap.3420-T1
Valid prediction for snap_scaffold_2-snap.3422-T1
Valid prediction for Augustus_model.g3652.t1
Valid prediction for snap_scaffold_2-snap.3423-T1
Couldn't classify 60322, 60348
Couldn't classify 61770, 61936
Sorry, prediction pasa_asmbl_25175.p1 fails validation.
(CAC)	 CA	60322-60348	GT	AGG
(ATC)	 AG	60564-60624	GT	TAG
(GTA)	 AG	60815-60928	GT	AGG
(GTC)	 AG	61048-61110	GT	CGG
(AAG)	 AG	61295-61453	GT	AGG
(AAA)	 AG	61770-61936	GT	AGG
-recovered pasa_asmbl_25175.p1, internal, 60564, 60624
-recovered pasa_asmbl_25175.p1, internal, 60815, 60928
-recovered pasa_asmbl_25175.p1, internal, 61048, 61110
-recovered pasa_asmbl_25175.p1, internal, 61295, 61453
-recovered pasa_asmbl_25175.p1, internal, 61770, 61936
Valid prediction for snap_scaffold_2-snap.3406-T1
Valid prediction for GlimmerHMM_glimmerT_5416-T1
Valid prediction for snap_scaffold_2-snap.3429-T1
Couldn't classify 121939, 121980
Sorry, prediction pasa_asmbl_25184.p2 fails validation.
(ATG)	 AG	117887-117956	GT	CGG
(AAG)	 AG	120759-120826	GT	AGG
(TTA)	 AG	121495-121623	GT	GGG
(ATT)	 AG	121939-121980	GT	GGG
-recovered pasa_asmbl_25184.p2, initial, 117887, 117956
-recovered pasa_asmbl_25184.p2, internal, 117887, 117956
-recovered pasa_asmbl_25184.p2, internal, 120759, 120826
-recovered pasa_asmbl_25184.p2, internal, 121495, 121623
-recovered pasa_asmbl_25184.p2, internal, 121939, 121980
Valid prediction for GlimmerHMM_glimmerT_5440-T1
Valid prediction for GlimmerHMM_glimmerT_5410-T1
Valid prediction for snap_scaffold_2-snap.3435-T1
Valid prediction for GlimmerHMM_glimmerT_5442-T1
Valid prediction for Augustus_model.g3673.t1
Valid prediction for snap_scaffold_2-snap.3426-T1
Valid prediction for Augustus_model.g3661.t1
Valid prediction for snap_scaffold_2-snap.3431-T1
Valid prediction for snap_scaffold_2-snap.3447-T1
Valid prediction for Augustus_model.g3647.t1
Valid prediction for GlimmerHMM_glimmerT_5413-T1
Valid prediction for GlimmerHMM_glimmerT_5419-T1
Valid prediction for snap_scaffold_2-snap.3408-T1
Valid prediction for CodingQuarry_transcript_28818-T1
Valid prediction for snap_scaffold_2-snap.3444-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_28825-T1
Valid prediction for GlimmerHMM_glimmerT_5407-T1
Valid prediction for GlimmerHMM_glimmerT_5432-T1
Valid prediction for pasa_asmbl_23732.p1
Valid prediction for CodingQuarry_transcript_28820-T1
Valid prediction for Augustus_model.g3665.t1
Valid prediction for CodingQuarry_transcript_28823-T1
Valid prediction for GlimmerHMM_glimmerT_5429-T1
Valid prediction for Augustus_model.g3671.t1
Valid prediction for snap_scaffold_2-snap.3415-T1
Valid prediction for GlimmerHMM_glimmerT_5424-T1
Valid prediction for GlimmerHMM_glimmerT_5439-T1
Valid prediction for pasa_asmbl_23749.p2
Valid prediction for CodingQuarry_transcript_28827-T1
Valid prediction for snap_scaffold_2-snap.3442-T1
Valid prediction for snap_scaffold_2-snap.3439-T1
Valid prediction for GlimmerHMM_glimmerT_5426-T1
Valid prediction for snap_scaffold_2-snap.3417-T1
Valid prediction for snap_scaffold_2-snap.3440-T1
Valid prediction for GlimmerHMM_glimmerT_5406-T1
Valid prediction for CodingQuarry_transcript_28815-T1
Couldn't classify 57528, 57579
Couldn't classify 58654, 58752
Sorry, prediction pasa_asmbl_23748.p1 fails validation.
(AAA)	 GG	57528-57579	GT	AGG
(CCG)	 AG	57690-57824	GT	CGG
(ACC)	 AG	58052-58206	GT	AGG
(AGG)	 AG	58295-58384	GT	AGG
(GCG)	 AG	58654-58752	AT	AGA
-recovered pasa_asmbl_23748.p1, internal, 57690, 57824
-recovered pasa_asmbl_23748.p1, internal, 58052, 58206
-recovered pasa_asmbl_23748.p1, internal, 58295, 58384
Valid prediction for GlimmerHMM_glimmerT_5420-T1
Valid prediction for GlimmerHMM_glimmerT_5427-T1
Valid prediction for Augustus_model.g3667.t1
Valid prediction for GlimmerHMM_glimmerT_5434-T1
Valid prediction for GlimmerHMM_glimmerT_5418-T1
Valid prediction for snap_scaffold_2-snap.3446-T1
Couldn't classify 78826, 78984
Couldn't classify 79621, 79643
Sorry, prediction pasa_asmbl_23747.p1 fails validation.
(GAA)	 GG	78826-78984	GT	AGG
(GAG)	 AG	79162-79328	GT	AGG
(CAC)	 AG	79447-79520	GT	TGG
(CAA)	 AG	79621-79643	GC	GGG
-recovered pasa_asmbl_23747.p1, internal, 79162, 79328
-recovered pasa_asmbl_23747.p1, internal, 79447, 79520
-recovered pasa_asmbl_23747.p1, internal, 79621, 79643
Valid prediction for GlimmerHMM_glimmerT_5430-T1
Valid prediction for GlimmerHMM_glimmerT_5423-T1
Valid prediction for snap_scaffold_2-snap.3449-T1
Valid prediction for snap_scaffold_2-snap.3401-T1
Valid prediction for Augustus_model.g3649.t1
Valid prediction for Augustus_model.g3641.t1
Valid prediction for GlimmerHMM_glimmerT_5411-T1
Valid prediction for snap_scaffold_2-snap.3438-T1
Valid prediction for Augustus_model.g3666.t1
Valid prediction for snap_scaffold_2-snap.3416-T1
Valid prediction for GlimmerHMM_glimmerT_5437-T1
Valid prediction for CodingQuarry_transcript_28824-T1
Valid prediction for snap_scaffold_2-snap.3400-T1
Valid prediction for Augustus_model.g3645.t1
Valid prediction for Augustus_model.g3646.t1
Valid prediction for Augustus_model.g3668.t1
Couldn't classify 82615, 82665
Sorry, prediction pasa_asmbl_23746.p1 fails validation.
(CTC)	 AG	82615-82665	GT	TGG
(ATG)	 AG	82764-83279	GT	AGG
(GTC)	 AG	83359-83549	GT	AGG
(GCC)	 AG	83734-83894	GT	AGG
(GGT)	 AG	84033-84193	AT	GAA
-recovered pasa_asmbl_23746.p1, initial, 82764, 83279
add_exon() Sorry, pasa_asmbl_23746.p1 83734-83894-terminal-2 is invalid.
-recovered pasa_asmbl_23746.p1, terminal, 83734, 83894
-recovered pasa_asmbl_23746.p1, terminal, 84033, 84193
-recovered pasa_asmbl_23746.p1, internal, 82615, 82665
-recovered pasa_asmbl_23746.p1, internal, 82764, 83279
-recovered pasa_asmbl_23746.p1, internal, 83359, 83549
-recovered pasa_asmbl_23746.p1, internal, 83734, 83894
Valid prediction for Augustus_model.g3659.t1
Valid prediction for snap_scaffold_2-snap.3403-T1
Valid prediction for snap_scaffold_2-snap.3436-T1
Valid prediction for snap_scaffold_2-snap.3409-T1
Valid prediction for Augustus_model.g3662.t1
Valid prediction for HiQ_model.g3655.t1
Valid prediction for GlimmerHMM_glimmerT_5415-T1
Valid prediction for snap_scaffold_2-snap.3410-T1
Valid prediction for GlimmerHMM_glimmerT_5412-T1
Valid prediction for snap_scaffold_2-snap.3437-T1
Valid prediction for pasa_asmbl_23752.p1
Valid prediction for pasa_asmbl_23745.p1
Valid prediction for snap_scaffold_2-snap.3414-T1
Valid prediction for Augustus_model.g3670.t1
Valid prediction for snap_scaffold_2-snap.3434-T1
Valid prediction for snap_scaffold_2-snap.3402-T1
Valid prediction for pasa_asmbl_23741.p1
Valid prediction for snap_scaffold_2-snap.3399-T1
Valid prediction for snap_scaffold_2-snap.3433-T1
Couldn't classify 323774, 323991
Couldn't classify 324358, 324376
Sorry, prediction pasa_asmbl_23731.p1 fails validation.
(GAG)	 GG	323774-323991	GT	AGG
(GGC)	 AG	324090-324161	GT	GGG
(GGA)	 AG	324358-324376	TG	CAT
-recovered pasa_asmbl_23731.p1, internal, 324090, 324161
Valid prediction for GlimmerHMM_glimmerT_5433-T1
Valid prediction for GlimmerHMM_glimmerT_5438-T1
Valid prediction for Augustus_model.g3658.t1
Valid prediction for snap_scaffold_2-snap.3430-T1
Valid prediction for GlimmerHMM_glimmerT_5436-T1
Valid prediction for GlimmerHMM_glimmerT_5408-T1
Valid prediction for HiQ_model.g3669.t1
Valid prediction for HiQ_model.g3663.t1
Valid prediction for snap_scaffold_2-snap.3441-T1
Valid prediction for GlimmerHMM_glimmerT_5435-T1
Valid prediction for Augustus_model.g3640.t1
Valid prediction for snap_scaffold_2-snap.3445-T1
Valid prediction for snap_scaffold_2-snap.3443-T1
Valid prediction for GlimmerHMM_glimmerT_5414-T1
Valid prediction for GlimmerHMM_glimmerT_5431-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 64249, rend_intergenic: 64246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 321731, rend_intergenic: 319538  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 324588
-exon list size: 685


building trellis

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38.6    
38.7    
38.9    
39.0    
39.2    
39.3    
39.4    
39.6    
39.7    
39.9    
40.0    
40.2    
40.3    
40.5    
40.6    
40.8    
40.9    
41.0    
41.2    
41.3    
41.5    
41.6    
41.8    
41.9    
42.1    
42.2    
42.4    
42.5    
42.6    
42.8    
42.9    
43.1    
43.2    
43.4    
43.5    
43.7    
43.8    
44.0    
44.1    
44.3    
44.4    
44.5    
44.7    
44.8    
45.0    
45.1    
45.3    
45.4    
45.6    
45.7    
45.9    
46.0    
46.1    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.2    
47.3    
47.5    
47.6    
47.7    
47.9    
48.0    
48.2    
48.3    
48.5    
48.6    
48.8    
48.9    
49.1    
49.2    
49.3    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.7    
50.8    
50.9    
51.1    
51.2    
51.4    
51.5    
51.7    
51.8    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.9    
54.0    
54.1    
54.3    
54.4    
54.6    
54.7    
54.9    
55.0    
55.2    
55.3    
55.5    
55.6    
55.7    
55.9    
56.0    
56.2    
56.3    
56.5    
56.6    
56.8    
56.9    
57.1    
57.2    
57.4    
57.5    
57.6    
57.8    
57.9    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
59.0    
59.1    
59.2    
59.4    
59.5    
59.7    
59.8    
60.0    
60.1    
60.3    
60.4    
60.6    
60.7    
60.8    
61.0    
61.1    
61.3    
61.4    
61.6    
61.7    
61.9    
62.0    
62.2    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.8    
63.9    
64.0    
64.2    
64.3    
64.5    
64.6    
64.8    
64.9    
65.1    
65.2    
65.4    
65.5    
65.6    
65.8    
65.9    
66.1    
66.2    
66.4    
66.5    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.5    
70.6    
70.7    
70.9    
71.0    
71.2    
71.3    
71.5    
71.6    
71.8    
71.9    
72.1    
72.2    
72.3    
72.5    
72.6    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
73.9    
74.1    
74.2    
74.4    
74.5    
74.7    
74.8    
75.0    
75.1    
75.3    
75.4    
75.5    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.9    
77.0    
77.1    
77.3    
77.4    
77.6    
77.7    
77.9    
78.0    
78.2    
78.3    
78.5    
78.6    
78.7    
78.9    
79.0    
79.2    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.8    
80.9    
81.1    
81.2    
81.4    
81.5    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.7    
82.8    
83.0    
83.1    
83.3    
83.4    
83.6    
83.7    
83.8    
84.0    
84.1    
84.3    
84.4    
84.6    
84.7    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.9    
86.0    
86.2    
86.3    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.5    
87.6    
87.8    
87.9    
88.1    
88.2    
88.4    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.4    
89.5    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.7    
90.8    
91.0    
91.1    
91.3    
91.4    
91.6    
91.7    
91.8    
92.0    
92.1    
92.3    
92.4    
92.6    
92.7    
92.9    
93.0    
93.2    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.1    
95.2    
95.3    
95.5    
95.6    
95.8    
95.9    
96.1    
96.2    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.7    
97.8    
98.0    
98.1    
98.3    
98.4    
98.5    
98.7    
98.8    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 43 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 64249, rend_intergenic: 64246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 321731, rend_intergenic: 319538  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 43 predictions persist after filtering for low support