-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_2/scaffold_2_13849353-14200292

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_4883-T1
Valid prediction for GlimmerHMM_glimmerT_4868-T1
Valid prediction for CodingQuarry_transcript_28714-T1
Valid prediction for GlimmerHMM_glimmerT_4866-T1
Valid prediction for GlimmerHMM_glimmerT_4882-T1
Valid prediction for pasa_asmbl_24868.p1
Valid prediction for pasa_asmbl_24882.p1
Valid prediction for pasa_asmbl_24889.p1
Valid prediction for snap_scaffold_2-snap.2684-T1
Couldn't classify 301295, 301406
Sorry, prediction pasa_asmbl_24885.p1 fails validation.
(GTG)	 AT	301295-301406	GT	GCG
(GCT)	 AG	301855-302036	GT	AGG
(ATC)	 AG	302198-302353	GT	GTG
(GTG)	 AG	302677-302821	GT	TGG
(GTT)	 AG	304017-304201	GT	AGG
(GTG)	 AG	304333-304485	GT	AGG
(GTC)	 AG	305036-305179	CC	AGC
-recovered pasa_asmbl_24885.p1, terminal, 305036, 305179
-recovered pasa_asmbl_24885.p1, internal, 301855, 302036
-recovered pasa_asmbl_24885.p1, internal, 302198, 302353
-recovered pasa_asmbl_24885.p1, internal, 302677, 302821
-recovered pasa_asmbl_24885.p1, internal, 304017, 304201
-recovered pasa_asmbl_24885.p1, internal, 304333, 304485
Valid prediction for pasa_asmbl_24872.p1
Valid prediction for GlimmerHMM_glimmerT_4849-T1
Valid prediction for snap_scaffold_2-snap.2662-T1
Valid prediction for snap_scaffold_2-snap.2675-T1
Valid prediction for snap_scaffold_2-snap.2668-T1
Valid prediction for snap_scaffold_2-snap.2698-T1
Valid prediction for snap_scaffold_2-snap.2685-T1
Couldn't classify 250772, 251164
Sorry, prediction pasa_asmbl_24877.p1 fails validation.
(GGT)	 AA	250772-251164	CA	ACC
Valid prediction for CodingQuarry_transcript_28701-T1
Valid prediction for GlimmerHMM_glimmerT_4878-T1
Valid prediction for snap_scaffold_2-snap.2669-T1
Valid prediction for GlimmerHMM_glimmerT_4879-T1
Couldn't classify 251174, 251879
Sorry, prediction pasa_asmbl_24878.p1 fails validation.
(CTA)	 AA	251174-251879	GT	TGG
(TGG)	 AG	251998-252120	GT	ATG
(GTG)	 AG	252233-252348	TC	GAT
-recovered pasa_asmbl_24878.p1, terminal, 252233, 252348
-recovered pasa_asmbl_24878.p1, internal, 251998, 252120
Valid prediction for Augustus_model.g3268.t1
Valid prediction for snap_scaffold_2-snap.2654-T1
Valid prediction for snap_scaffold_2-snap.2672-T1
Valid prediction for pasa_asmbl_24891.p1
Valid prediction for Augustus_model.g3278.t1
Valid prediction for pasa_asmbl_24862.p1
Valid prediction for snap_scaffold_2-snap.2695-T1
Valid prediction for snap_scaffold_2-snap.2703-T1
Valid prediction for GlimmerHMM_glimmerT_4852-T1
Valid prediction for GlimmerHMM_glimmerT_4862-T1
Valid prediction for GlimmerHMM_glimmerT_4872-T1
Valid prediction for CodingQuarry_transcript_28705-T1
Valid prediction for snap_scaffold_2-snap.2663-T1
Valid prediction for HiQ_model.g3267.t1
Valid prediction for HiQ_model.g3252.t1
Valid prediction for CodingQuarry_transcript_28704-T1
Valid prediction for snap_scaffold_2-snap.2676-T1
Valid prediction for GlimmerHMM_glimmerT_4871-T1
Valid prediction for GlimmerHMM_glimmerT_4870-T1
Valid prediction for snap_scaffold_2-snap.2688-T1
Valid prediction for snap_scaffold_2-snap.2655-T1
Valid prediction for GlimmerHMM_glimmerT_4860-T1
Valid prediction for CodingQuarry_transcript_28718-T1
Couldn't classify 311910, 311992
Sorry, prediction pasa_asmbl_24887.p1 fails validation.
(ATG)	 CG	310665-310794	GT	GAG
(TCT)	 AG	311389-311787	GT	AGG
(GAG)	 AG	311910-311992	GC	ATG
-recovered pasa_asmbl_24887.p1, initial, 310665, 310794
-recovered pasa_asmbl_24887.p1, internal, 311389, 311787
-recovered pasa_asmbl_24887.p1, internal, 311910, 311992
Valid prediction for Augustus_model.g3269.t1
Valid prediction for snap_scaffold_2-snap.2693-T1
Valid prediction for GlimmerHMM_glimmerT_4876-T1
Valid prediction for snap_scaffold_2-snap.2689-T1
Valid prediction for HiQ_model.g3260.t1
Valid prediction for CodingQuarry_transcript_28711-T1
Valid prediction for Augustus_model.g3275.t1
Couldn't classify 43942, 44073
Sorry, prediction pasa_asmbl_24860.p1 fails validation.
(CTA)	 AA	43942-44073	GT	AGG
(ATT)	 AG	44664-44747	GT	AGG
(AAA)	 AG	45016-45076	GT	TGG
(GCG)	 AG	45520-45629	GT	AGG
(CCT)	 AG	45863-46075	TG	AAT
-recovered pasa_asmbl_24860.p1, terminal, 45863, 46075
-recovered pasa_asmbl_24860.p1, internal, 44664, 44747
-recovered pasa_asmbl_24860.p1, internal, 45016, 45076
-recovered pasa_asmbl_24860.p1, internal, 45520, 45629
Valid prediction for snap_scaffold_2-snap.2702-T1
Valid prediction for HiQ_model.g3280.t1
Valid prediction for snap_scaffold_2-snap.2696-T1
Valid prediction for pasa_asmbl_24874.p1
Valid prediction for Augustus_model.g3262.t1
Valid prediction for snap_scaffold_2-snap.2682-T1
Valid prediction for Augustus_model.g3270.t1
Valid prediction for snap_scaffold_2-snap.2687-T1
Valid prediction for GlimmerHMM_glimmerT_4863-T1
Valid prediction for snap_scaffold_2-snap.2694-T1
Valid prediction for snap_scaffold_2-snap.2699-T1
Valid prediction for Augustus_model.g3274.t1
Valid prediction for HiQ_model.g3273.t1
Valid prediction for GlimmerHMM_glimmerT_4869-T1
Valid prediction for CodingQuarry_transcript_28715-T1
Valid prediction for HiQ_model.g3266.t1
Valid prediction for Augustus_model.g3277.t1
Valid prediction for CodingQuarry_transcript_28713-T1
Valid prediction for GlimmerHMM_glimmerT_4875-T1
Valid prediction for CodingQuarry_transcript_28710-T1
Valid prediction for snap_scaffold_2-snap.2701-T1
Valid prediction for snap_scaffold_2-snap.2691-T1
Valid prediction for GlimmerHMM_glimmerT_4867-T1
Valid prediction for Augustus_model.g3271.t1
Valid prediction for snap_scaffold_2-snap.2690-T1
Valid prediction for GlimmerHMM_glimmerT_4853-T1
Valid prediction for snap_scaffold_2-snap.2681-T1
Valid prediction for pasa_asmbl_24881.p1
Valid prediction for CodingQuarry_transcript_28709-T1
Valid prediction for snap_scaffold_2-snap.2705-T1
Valid prediction for snap_scaffold_2-snap.2660-T1
Valid prediction for HiQ_model.g3265.t1
Valid prediction for snap_scaffold_2-snap.2680-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for HiQ_model.g3276.t1
Valid prediction for snap_scaffold_2-snap.2686-T1
Valid prediction for snap_scaffold_2-snap.2656-T1
Valid prediction for pasa_asmbl_23558.p1
Valid prediction for HiQ_model.g3264.t1
Valid prediction for GlimmerHMM_glimmerT_4851-T1
Valid prediction for snap_scaffold_2-snap.2661-T1
Valid prediction for snap_scaffold_2-snap.2674-T1
Valid prediction for HiQ_model.g3258.t1
Valid prediction for CodingQuarry_transcript_28717-T1
Valid prediction for Augustus_model.g3251.t1
Valid prediction for HiQ_model.g3257.t1
Valid prediction for CodingQuarry_transcript_28708-T1
Valid prediction for GlimmerHMM_glimmerT_4855-T1
Valid prediction for snap_scaffold_2-snap.2657-T1
Valid prediction for Augustus_model.g3254.t1
Valid prediction for snap_scaffold_2-snap.2704-T1
Valid prediction for GlimmerHMM_glimmerT_4877-T1
Valid prediction for snap_scaffold_2-snap.2665-T1
Valid prediction for GlimmerHMM_glimmerT_4880-T1
Valid prediction for CodingQuarry_transcript_28702-T1
Valid prediction for pasa_asmbl_23570.p1
Valid prediction for CodingQuarry_transcript_28716-T1
Valid prediction for Augustus_model.g3261.t1
Valid prediction for snap_scaffold_2-snap.2658-T1
Valid prediction for snap_scaffold_2-snap.2664-T1
Valid prediction for snap_scaffold_2-snap.2671-T1
Valid prediction for GlimmerHMM_glimmerT_4858-T1
Valid prediction for Augustus_model.g3281.t1
Valid prediction for GlimmerHMM_glimmerT_4873-T1
Valid prediction for GlimmerHMM_glimmerT_4854-T1
Valid prediction for CodingQuarry_transcript_28707-T1
Valid prediction for GlimmerHMM_glimmerT_4856-T1
Valid prediction for snap_scaffold_2-snap.2673-T1
Valid prediction for snap_scaffold_2-snap.2678-T1
Valid prediction for snap_scaffold_2-snap.2653-T1
Valid prediction for snap_scaffold_2-snap.2700-T1
Valid prediction for Augustus_model.g3259.t1
Valid prediction for CodingQuarry_transcript_28703-T1
Valid prediction for GlimmerHMM_glimmerT_4865-T1
Valid prediction for GlimmerHMM_glimmerT_4859-T1
Valid prediction for snap_scaffold_2-snap.2667-T1
Valid prediction for snap_scaffold_2-snap.2679-T1
Valid prediction for snap_scaffold_2-snap.2670-T1
Valid prediction for snap_scaffold_2-snap.2683-T1
Valid prediction for GlimmerHMM_glimmerT_4861-T1
Valid prediction for snap_scaffold_2-snap.2677-T1
Couldn't classify 230434, 230563
Sorry, prediction pasa_asmbl_23919.p1 fails validation.
(GTT)	 AG	230434-230563	GT	AGG
(GCA)	 AG	230660-230796	GT	AGG
(GCG)	 AG	230900-231069	GT	AGG
(GGA)	 AG	231269-231425	GT	TGG
(ATG)	 AG	232039-232148	GT	AGG
(GTT)	 AG	232442-232649	GT	ACG
(ACC)	 AG	233004-233128	GT	GGG
(GTT)	 AG	233388-233505	GT	AGG
(TGT)	 AG	233596-233677	GC	TGG
(AGC)	 AG	233875-233984	GT	TGG
(GTC)	 AG	234089-234214	GT	TGG
(CTG)	 AG	234314-234496	AC	AGA
-recovered pasa_asmbl_23919.p1, initial, 232039, 232148
-recovered pasa_asmbl_23919.p1, terminal, 234314, 234496
-recovered pasa_asmbl_23919.p1, internal, 230434, 230563
-recovered pasa_asmbl_23919.p1, internal, 230660, 230796
-recovered pasa_asmbl_23919.p1, internal, 230900, 231069
-recovered pasa_asmbl_23919.p1, internal, 231269, 231425
-recovered pasa_asmbl_23919.p1, internal, 232039, 232148
-recovered pasa_asmbl_23919.p1, internal, 232442, 232649
-recovered pasa_asmbl_23919.p1, internal, 233004, 233128
-recovered pasa_asmbl_23919.p1, internal, 233388, 233505
-recovered pasa_asmbl_23919.p1, internal, 233596, 233677
-recovered pasa_asmbl_23919.p1, internal, 233875, 233984
-recovered pasa_asmbl_23919.p1, internal, 234089, 234214
Couldn't classify 221817, 221938
Couldn't classify 228599, 228694
Sorry, prediction pasa_asmbl_23552.p1 fails validation.
(GTG)	 CA	221817-221938	GT	AAG
(TAA)	 AG	222102-222213	GT	CGG
(GCG)	 AG	222743-222822	GT	AGG
(ACA)	 AG	222936-222999	GT	AGG
(AGT)	 AG	223266-223412	GT	AGG
(ACT)	 AG	223533-223560	GT	TGG
(GTC)	 AG	223709-223949	GT	AGG
(CTA)	 AG	225029-225151	GT	CTG
(GAT)	 AG	225284-225451	GT	CGG
(TGT)	 AG	225689-225797	GT	AGG
(GTG)	 AG	226104-226246	GT	GGG
(GTT)	 AG	226985-227173	GT	AAG
(GTT)	 AG	228348-228441	GT	AGG
(GCA)	 AG	228599-228694	TA	GGT
-recovered pasa_asmbl_23552.p1, internal, 222102, 222213
-recovered pasa_asmbl_23552.p1, internal, 222743, 222822
-recovered pasa_asmbl_23552.p1, internal, 222936, 222999
-recovered pasa_asmbl_23552.p1, internal, 223266, 223412
-recovered pasa_asmbl_23552.p1, internal, 223533, 223560
-recovered pasa_asmbl_23552.p1, internal, 223709, 223949
-recovered pasa_asmbl_23552.p1, internal, 225029, 225151
-recovered pasa_asmbl_23552.p1, internal, 225284, 225451
-recovered pasa_asmbl_23552.p1, internal, 225689, 225797
-recovered pasa_asmbl_23552.p1, internal, 226104, 226246
-recovered pasa_asmbl_23552.p1, internal, 226985, 227173
-recovered pasa_asmbl_23552.p1, internal, 228348, 228441
Valid prediction for GlimmerHMM_glimmerT_4881-T1
Couldn't classify 289404, 289531
Couldn't classify 290858, 291098
Sorry, prediction pasa_asmbl_23543.p1 fails validation.
(TCT)	 GC	289404-289531	GT	AGG
(GCC)	 AG	290858-291098	AC	CCA
Couldn't classify 236054, 236106
Sorry, prediction pasa_asmbl_23550.p1 fails validation.
(CAG)	 GC	236054-236106	GT	GGG
(GAA)	 AG	236590-236638	GT	CTG
(TGG)	 AG	236778-236856	GT	TGG
(GTG)	 AG	237173-237342	GT	AGG
(GAC)	 AG	237675-237775	GT	TAG
(TGA)	 AG	238304-238337	GA	AAG
-recovered pasa_asmbl_23550.p1, terminal, 238304, 238337
-recovered pasa_asmbl_23550.p1, internal, 236590, 236638
-recovered pasa_asmbl_23550.p1, internal, 236778, 236856
-recovered pasa_asmbl_23550.p1, internal, 237173, 237342
-recovered pasa_asmbl_23550.p1, internal, 237675, 237775
Valid prediction for pasa_asmbl_23547.p1
Valid prediction for CodingQuarry_transcript_28706-T1
Valid prediction for Augustus_model.g3253.t1
Valid prediction for GlimmerHMM_glimmerT_4850-T1
Valid prediction for Augustus_model.g3250.t1
Valid prediction for snap_scaffold_2-snap.2697-T1
Valid prediction for Augustus_model.g3279.t1
Couldn't classify 335095, 335304
Sorry, prediction pasa_asmbl_24037.p1 fails validation.
(ATG)	 GA	333475-333690	GT	CGG
(GAA)	 AG	335095-335304	GA	GTG
-recovered pasa_asmbl_24037.p1, initial, 333475, 333690
Valid prediction for GlimmerHMM_glimmerT_4874-T1
Valid prediction for snap_scaffold_2-snap.2659-T1
Valid prediction for CodingQuarry_transcript_28719-T1
Valid prediction for snap_scaffold_2-snap.2666-T1
Valid prediction for Augustus_model.g3255.t1
Valid prediction for snap_scaffold_2-snap.2692-T1
Couldn't classify 292203, 292295
Sorry, prediction pasa_asmbl_23537.p1 fails validation.
(GAT)	 CA	292203-292295	GT	AGG
(GCT)	 AG	292912-292995	GT	CGG
(GCT)	 AG	294519-294572	GT	AGG
(GTT)	 AG	295625-295690	GT	ATG
(GTG)	 AG	296677-296757	GT	AGG
(GAC)	 AG	296947-297096	GT	CGG
(GAG)	 AG	297292-297393	GT	AGG
(CAG)	 AG	297579-297690	GT	TGG
(AGA)	 AG	297769-297914	GT	GGG
(GCT)	 AG	298100-298291	GT	AGG
(GCT)	 AG	298449-298545	GT	AGG
(GTC)	 AG	298756-298847	GT	GGG
(GAG)	 AG	299120-299359	GT	CAG
(CGA)	 AG	301777-301965	GT	AGG
(CTG)	 AG	302295-302428	GT	AGG
(TGT)	 AG	302749-302891	GT	AGG
(CCA)	 AG	303459-303481	CA	GAC
-recovered pasa_asmbl_23537.p1, terminal, 303459, 303481
-recovered pasa_asmbl_23537.p1, internal, 292912, 292995
-recovered pasa_asmbl_23537.p1, internal, 294519, 294572
-recovered pasa_asmbl_23537.p1, internal, 295625, 295690
-recovered pasa_asmbl_23537.p1, internal, 296677, 296757
-recovered pasa_asmbl_23537.p1, internal, 296947, 297096
-recovered pasa_asmbl_23537.p1, internal, 297292, 297393
-recovered pasa_asmbl_23537.p1, internal, 297579, 297690
-recovered pasa_asmbl_23537.p1, internal, 297769, 297914
-recovered pasa_asmbl_23537.p1, internal, 298100, 298291
-recovered pasa_asmbl_23537.p1, internal, 298449, 298545
-recovered pasa_asmbl_23537.p1, internal, 298756, 298847
-recovered pasa_asmbl_23537.p1, internal, 299120, 299359
-recovered pasa_asmbl_23537.p1, internal, 301777, 301965
-recovered pasa_asmbl_23537.p1, internal, 302295, 302428
-recovered pasa_asmbl_23537.p1, internal, 302749, 302891
Valid prediction for GlimmerHMM_glimmerT_4884-T1
Valid prediction for Augustus_model.g3272.t1
Couldn't classify 344506, 344596
Couldn't classify 348939, 349007
Sorry, prediction pasa_asmbl_24017.p1 fails validation.
(GAG)	 TA	344506-344596	GT	AGG
(GTA)	 AG	347570-347742	GT	AGG
(ATC)	 AG	348939-349007	GT	AGG
-recovered pasa_asmbl_24017.p1, internal, 347570, 347742
-recovered pasa_asmbl_24017.p1, internal, 348939, 349007
Valid prediction for Augustus_model.g3263.t1
Valid prediction for GlimmerHMM_glimmerT_4857-T1
Valid prediction for GlimmerHMM_glimmerT_4864-T1
Valid prediction for Augustus_model.g3256.t1
Valid prediction for pasa_asmbl_23554.p1
Valid prediction for pasa_asmbl_23556.p1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 71041, rend_intergenic: 66060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127206, rend_intergenic: 120025  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148663, rend_intergenic: 145797  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229906, rend_intergenic: 226481  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 340202, rend_intergenic: 337829  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 344492, rend_intergenic: 341958  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 350940
-exon list size: 596


building trellis

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36.1    
36.3    
36.5    
36.6    
36.8    
37.0    
37.1    
37.3    
37.5    
37.6    
37.8    
38.0    
38.1    
38.3    
38.5    
38.6    
38.8    
39.0    
39.1    
39.3    
39.5    
39.6    
39.8    
40.0    
40.1    
40.3    
40.5    
40.6    
40.8    
41.0    
41.1    
41.3    
41.5    
41.6    
41.8    
42.0    
42.1    
42.3    
42.5    
42.6    
42.8    
43.0    
43.1    
43.3    
43.5    
43.6    
43.8    
44.0    
44.1    
44.3    
44.5    
44.6    
44.8    
45.0    
45.2    
45.3    
45.5    
45.7    
45.8    
46.0    
46.2    
46.3    
46.5    
46.7    
46.8    
47.0    
47.2    
47.3    
47.5    
47.7    
47.8    
48.0    
48.2    
48.3    
48.5    
48.7    
48.8    
49.0    
49.2    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.8    
51.0    
51.2    
51.3    
51.5    
51.7    
51.8    
52.0    
52.2    
52.3    
52.5    
52.7    
52.8    
53.0    
53.2    
53.3    
53.5    
53.7    
53.8    
54.0    
54.2    
54.3    
54.5    
54.7    
54.8    
55.0    
55.2    
55.4    
55.5    
55.7    
55.9    
56.0    
56.2    
56.4    
56.5    
56.7    
56.9    
57.0    
57.2    
57.4    
57.5    
57.7    
57.9    
58.0    
58.2    
58.4    
58.5    
58.7    
58.9    
59.0    
59.2    
59.4    
59.5    
59.7    
59.9    
60.0    
60.2    
60.4    
60.5    
60.7    
60.9    
61.0    
61.2    
61.4    
61.5    
61.7    
61.9    
62.0    
62.2    
62.4    
62.5    
62.7    
62.9    
63.0    
63.2    
63.4    
63.5    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.9    
65.1    
65.2    
65.4    
65.6    
65.7    
65.9    
66.1    
66.2    
66.4    
66.6    
66.7    
66.9    
67.1    
67.2    
67.4    
67.6    
67.7    
67.9    
68.1    
68.2    
68.4    
68.6    
68.7    
68.9    
69.1    
69.2    
69.4    
69.6    
69.7    
69.9    
70.1    
70.2    
70.4    
70.6    
70.7    
70.9    
71.1    
71.2    
71.4    
71.6    
71.7    
71.9    
72.1    
72.2    
72.4    
72.6    
72.7    
72.9    
73.1    
73.2    
73.4    
73.6    
73.7    
73.9    
74.1    
74.2    
74.4    
74.6    
74.7    
74.9    
75.1    
75.3    
75.4    
75.6    
75.8    
75.9    
76.1    
76.3    
76.4    
76.6    
76.8    
76.9    
77.1    
77.3    
77.4    
77.6    
77.8    
77.9    
78.1    
78.3    
78.4    
78.6    
78.8    
78.9    
79.1    
79.3    
79.4    
79.6    
79.8    
79.9    
80.1    
80.3    
80.4    
80.6    
80.8    
80.9    
81.1    
81.3    
81.4    
81.6    
81.8    
81.9    
82.1    
82.3    
82.4    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.8    
83.9    
84.1    
84.3    
84.4    
84.6    
84.8    
84.9    
85.1    
85.3    
85.5    
85.6    
85.8    
86.0    
86.1    
86.3    
86.5    
86.6    
86.8    
87.0    
87.1    
87.3    
87.5    
87.6    
87.8    
88.0    
88.1    
88.3    
88.5    
88.6    
88.8    
89.0    
89.1    
89.3    
89.5    
89.6    
89.8    
90.0    
90.1    
90.3    
90.5    
90.6    
90.8    
91.0    
91.1    
91.3    
91.5    
91.6    
91.8    
92.0    
92.1    
92.3    
92.5    
92.6    
92.8    
93.0    
93.1    
93.3    
93.5    
93.6    
93.8    
94.0    
94.1    
94.3    
94.5    
94.6    
94.8    
95.0    
95.2    
95.3    
95.5    
95.7    
95.8    
96.0    
96.2    
96.3    
96.5    
96.7    
96.8    
97.0    
97.2    
97.3    
97.5    
97.7    
97.8    
98.0    
98.2    
98.3    
98.5    
98.7    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 40 predictions from path traversal
Error with prediction: snap lend_intergenic: 71041, rend_intergenic: 66060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127206, rend_intergenic: 120025  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148663, rend_intergenic: 145797  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229906, rend_intergenic: 226481  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 340202, rend_intergenic: 337829  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 344492, rend_intergenic: 341958  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 40 predictions persist after filtering for low support