-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1983

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1, 89
Sorry, prediction Augustus_model.g40718.t1 fails validation.
(GGG)	 GG	1-89	GT	AGG
(GAA)	 AG	397-477	GC	GAG
-recovered Augustus_model.g40718.t1, terminal, 397, 477
-recovered Augustus_model.g40718.t1, internal, 397, 477

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 166, 190
Couldn't classify 856, 1210
Sorry, prediction snap_scaffold_1983-snap.1-T1 fails validation.
(GAT)	 AG	166-190	GT	AAG
(GGG)	 AG	856-1210	GT	CGG
-recovered snap_scaffold_1983-snap.1-T1, internal, 166, 190
-recovered snap_scaffold_1983-snap.1-T1, internal, 856, 1210

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1696
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support