-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1921

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 525, 854
Couldn't classify 877, 1212
Sorry, prediction snap_scaffold_1921-snap.1-T1 fails validation.
(GTG)	 AG	525-854	GT	GAG
(AGA)	 AG	877-1212	GT	AGG
-recovered snap_scaffold_1921-snap.1-T1, internal, 525, 854
-recovered snap_scaffold_1921-snap.1-T1, internal, 877, 1212

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1085, 1231
Sorry, prediction Augustus_model.g40692.t1 fails validation.
(ATG)	 AA	470-604	GT	AGG
(TTC)	 AG	1085-1231	GT	GGG
-recovered Augustus_model.g40692.t1, initial, 470, 604
-recovered Augustus_model.g40692.t1, internal, 1085, 1231

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1774
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support