-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_19/scaffold_19_8794966-8977538 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Couldn't classify 10193, 10356 Sorry, prediction pasa_asmbl_21554.p1 fails validation. (ATG) CT 6964-7042 GT ATG (TTC) AG 7786-7943 GT CGG (GAT) AG 8449-8473 GT TGG (TGT) AG 8563-8649 GT AGG (AGA) AG 9024-9146 GT TGG (ATA) AG 9394-9519 GT AGG (ACA) AG 10193-10356 CA ACC -recovered pasa_asmbl_21554.p1, initial, 6964, 7042 -recovered pasa_asmbl_21554.p1, internal, 7786, 7943 -recovered pasa_asmbl_21554.p1, internal, 8449, 8473 -recovered pasa_asmbl_21554.p1, internal, 8563, 8649 -recovered pasa_asmbl_21554.p1, internal, 9024, 9146 -recovered pasa_asmbl_21554.p1, internal, 9394, 9519 Valid prediction for GlimmerHMM_glimmerT_44519-T1 Valid prediction for GlimmerHMM_glimmerT_44536-T1 Valid prediction for GlimmerHMM_glimmerT_44533-T1 Valid prediction for pasa_asmbl_21568.p1 Valid prediction for GlimmerHMM_glimmerT_44518-T1 Valid prediction for GlimmerHMM_glimmerT_44517-T1 Valid prediction for GlimmerHMM_glimmerT_44526-T1 Valid prediction for pasa_asmbl_21565.p1 Valid prediction for CodingQuarry_transcript_25756-T1 Valid prediction for snap_scaffold_19-snap.1682-T1 Valid prediction for snap_scaffold_19-snap.1690-T1 Valid prediction for snap_scaffold_19-snap.1716-T1 Couldn't classify 2042, 2159 Couldn't classify 2852, 3058 Sorry, prediction pasa_asmbl_21552.p1 fails validation. (TTC) GA 2042-2159 GT AGG (GTG) AG 2652-2734 GT ATG (ATG) AG 2852-3058 GG CCG -recovered pasa_asmbl_21552.p1, internal, 2652, 2734 Valid prediction for snap_scaffold_19-snap.1697-T1 Valid prediction for HiQ_model.g29536.t1 Valid prediction for snap_scaffold_19-snap.1696-T1 Valid prediction for GlimmerHMM_glimmerT_44542-T1 Valid prediction for GlimmerHMM_glimmerT_44524-T1 Valid prediction for snap_scaffold_19-snap.1694-T1 Valid prediction for CodingQuarry_transcript_25747-T1 Valid prediction for snap_scaffold_19-snap.1712-T1 Valid prediction for snap_scaffold_19-snap.1703-T1 Couldn't classify 90545, 90959 Couldn't classify 92232, 92433 Sorry, prediction pasa_asmbl_21567.p1 fails validation. (GTA) TC 90545-90959 GT TGG (GGA) AG 91125-91319 GT AGG (GCA) AG 91490-91644 GT AGG (GTT) AG 91803-91885 GT AGG (AAA) AG 92232-92433 AA CCA -recovered pasa_asmbl_21567.p1, internal, 91125, 91319 -recovered pasa_asmbl_21567.p1, internal, 91490, 91644 -recovered pasa_asmbl_21567.p1, internal, 91803, 91885 Valid prediction for Augustus_model.g29542.t1 Valid prediction for GlimmerHMM_glimmerT_44543-T1 Valid prediction for snap_scaffold_19-snap.1701-T1 Valid prediction for CodingQuarry_transcript_25751-T1 Valid prediction for snap_scaffold_19-snap.1721-T1 Valid prediction for snap_scaffold_19-snap.1684-T1 Valid prediction for Augustus_model.g29547.t1 Valid prediction for GlimmerHMM_glimmerT_44529-T1 Couldn't classify 17442, 17479 Couldn't classify 19203, 19203 Sorry, prediction CodingQuarry_transcript_25749-T1 fails validation. (ATG) AC 14522-14597 GT CTG (TTA) AG 14777-14937 GT CCG (TTT) AT 17442-17479 GT AGG (TGT) AG 17609-17671 GT TAG (ACA) AG 19203-19203 CA GAC -recovered CodingQuarry_transcript_25749-T1, initial, 14522, 14597 -recovered CodingQuarry_transcript_25749-T1, internal, 14777, 14937 -recovered CodingQuarry_transcript_25749-T1, internal, 17609, 17671 Valid prediction for CodingQuarry_transcript_25748-T1 Valid prediction for Augustus_model.g29544.t1 Valid prediction for GlimmerHMM_glimmerT_44540-T1 Valid prediction for Augustus_model.g29543.t1 Valid prediction for pasa_asmbl_21559.p1 Valid prediction for snap_scaffold_19-snap.1693-T1 Valid prediction for CodingQuarry_transcript_25752-T1 Valid prediction for HiQ_model.g29549.t1 Valid prediction for pasa_asmbl_21564.p1 Valid prediction for snap_scaffold_19-snap.1709-T1 Couldn't classify 21605, 21629 Sorry, prediction pasa_asmbl_21560.p1 fails validation. (GTT) AT 21605-21629 GT TTG (ATG) AG 21783-21904 GT AGG (GCT) AG 23173-23291 GT GGG (GTT) AG 24125-24314 GT AGG (ATC) AG 24584-24748 GT AGG (GTG) AG 24896-25064 GT TGG (CAG) AG 25183-25325 GT AGG (TTT) AG 25433-25634 GT TGG (ACG) AG 25846-25997 CC GAC add_exon() Sorry, pasa_asmbl_21560.p1 21783-21904-initial-1 is invalid. -recovered pasa_asmbl_21560.p1, initial, 21783, 21904 -recovered pasa_asmbl_21560.p1, terminal, 25846, 25997 -recovered pasa_asmbl_21560.p1, internal, 21783, 21904 -recovered pasa_asmbl_21560.p1, internal, 23173, 23291 -recovered pasa_asmbl_21560.p1, internal, 24125, 24314 -recovered pasa_asmbl_21560.p1, internal, 24584, 24748 -recovered pasa_asmbl_21560.p1, internal, 24896, 25064 -recovered pasa_asmbl_21560.p1, internal, 25183, 25325 -recovered pasa_asmbl_21560.p1, internal, 25433, 25634 Valid prediction for Augustus_model.g29540.t1 Valid prediction for Augustus_model.g29550.t1 Valid prediction for GlimmerHMM_glimmerT_44520-T1 Valid prediction for GlimmerHMM_glimmerT_44528-T1 Valid prediction for snap_scaffold_19-snap.1719-T1 Valid prediction for HiQ_model.g29535.t1 Valid prediction for snap_scaffold_19-snap.1711-T1 Valid prediction for Augustus_model.g29555.t1 Valid prediction for snap_scaffold_19-snap.1718-T1 Valid prediction for snap_scaffold_19-snap.1717-T1 Valid prediction for Augustus_model.g29534.t1 Valid prediction for GlimmerHMM_glimmerT_44538-T1 Couldn't classify 92897, 93043 Sorry, prediction pasa_asmbl_21902.p1 fails validation. (CAG) GT 92897-93043 GT GGG (GTA) AG 93157-93303 GT AGG (AAG) AG 93441-93603 GT GGG (GTA) AG 93875-94326 GT GGG (CTG) AG 94481-94669 GC GAG -recovered pasa_asmbl_21902.p1, terminal, 94481, 94669 -recovered pasa_asmbl_21902.p1, internal, 93157, 93303 -recovered pasa_asmbl_21902.p1, internal, 93441, 93603 -recovered pasa_asmbl_21902.p1, internal, 93875, 94326 -recovered pasa_asmbl_21902.p1, internal, 94481, 94669 Valid prediction for GlimmerHMM_glimmerT_44530-T1 Valid prediction for snap_scaffold_19-snap.1692-T1 Valid prediction for GlimmerHMM_glimmerT_44535-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 95278, 95381 Couldn't classify 95810, 95879 Sorry, prediction pasa_asmbl_22692.p1 fails validation. (ATG) TA 94099-94240 GT AGG (ACA) AG 94739-94854 GT AGG (GCT) AG 95278-95381 AT GAA (AGA) AC 95810-95879 GT CTG (ATC) AG 95969-96042 GT TGG (GGA) AG 96204-96366 GT AGG (GTG) AG 96576-96665 GT ACG (GTC) AG 96747-96829 GT CAG (GAA) AG 96983-97050 GT AGG (GTC) AG 97172-97290 GT AGG (AGT) AG 97448-97640 GT AGG (CTA) AG 97753-97857 GT CGG (GTA) AG 97978-98088 GT TGG (AGT) AG 98449-98534 GT AGG (TAC) AG 98773-98880 GT AGG (ATG) AG 99032-99145 GT AGG (GGT) AG 99271-99376 GT AGG (AGG) AG 99467-99639 GT CGG (GTG) AG 99734-99886 GT AGG (CCG) AG 100095-100190 GG GAG -recovered pasa_asmbl_22692.p1, initial, 94099, 94240 -recovered pasa_asmbl_22692.p1, initial, 99032, 99145 add_exon() Sorry, pasa_asmbl_22692.p1 97448-97640-terminal-3 is invalid. -recovered pasa_asmbl_22692.p1, terminal, 97448, 97640 -recovered pasa_asmbl_22692.p1, terminal, 99271, 99376 -recovered pasa_asmbl_22692.p1, terminal, 100095, 100190 -recovered pasa_asmbl_22692.p1, internal, 94739, 94854 -recovered pasa_asmbl_22692.p1, internal, 95969, 96042 -recovered pasa_asmbl_22692.p1, internal, 96204, 96366 -recovered pasa_asmbl_22692.p1, internal, 96576, 96665 -recovered pasa_asmbl_22692.p1, internal, 96747, 96829 -recovered pasa_asmbl_22692.p1, internal, 96983, 97050 -recovered pasa_asmbl_22692.p1, internal, 97172, 97290 -recovered pasa_asmbl_22692.p1, internal, 97448, 97640 -recovered pasa_asmbl_22692.p1, internal, 97753, 97857 -recovered pasa_asmbl_22692.p1, internal, 97978, 98088 -recovered pasa_asmbl_22692.p1, internal, 98449, 98534 -recovered pasa_asmbl_22692.p1, internal, 98773, 98880 -recovered pasa_asmbl_22692.p1, internal, 99032, 99145 -recovered pasa_asmbl_22692.p1, internal, 99271, 99376 -recovered pasa_asmbl_22692.p1, internal, 99467, 99639 -recovered pasa_asmbl_22692.p1, internal, 99734, 99886 Valid prediction for snap_scaffold_19-snap.1687-T1 Valid prediction for GlimmerHMM_glimmerT_44541-T1 Valid prediction for Augustus_model.g29548.t1 Valid prediction for GlimmerHMM_glimmerT_44523-T1 Valid prediction for Augustus_model.g29539.t1 Valid prediction for GlimmerHMM_glimmerT_44525-T1 Valid prediction for snap_scaffold_19-snap.1702-T1 Valid prediction for HiQ_model.g29546.t1 Valid prediction for snap_scaffold_19-snap.1691-T1 Couldn't classify 83111, 83112 Sorry, prediction CodingQuarry_transcript_25755-T1 fails validation. (ATG) AA 83111-83112 GT ATG (GTG) AG 84727-84838 GT AGG (TGC) AG 85027-85129 GT AGG (ACA) AG 85284-85330 CT AAC -recovered CodingQuarry_transcript_25755-T1, terminal, 85284, 85330 -recovered CodingQuarry_transcript_25755-T1, internal, 84727, 84838 -recovered CodingQuarry_transcript_25755-T1, internal, 85027, 85129 Couldn't classify 130653, 130796 Couldn't classify 132080, 132136 Sorry, prediction pasa_asmbl_22314.p1 fails validation. (CAT) CT 130653-130796 GT AGG (ATC) AG 130984-131151 GT AGG (GAA) AG 131715-131894 GT AGG (ATG) AG 132080-132136 GG GAG -recovered pasa_asmbl_22314.p1, internal, 130984, 131151 -recovered pasa_asmbl_22314.p1, internal, 131715, 131894 Valid prediction for snap_scaffold_19-snap.1704-T1 Valid prediction for GlimmerHMM_glimmerT_44544-T1 Couldn't classify 95278, 95382 Couldn't classify 95811, 95879 Sorry, prediction CodingQuarry_transcript_25754-T1 fails validation. (ATG) TA 94099-94240 GT AGG (ACA) AG 94739-94854 GT AGG (GCT) AG 95278-95382 TA AAT (GAG) CA 95811-95879 GT CTG (ATC) AG 95969-96042 GT TGG (GGA) AG 96204-96366 GT AGG (GTG) AG 96576-96665 GT ACG (GTC) AG 96747-96829 GT CAG (GAA) AG 96983-97050 GT AGG (GTC) AG 97172-97290 GT AGG (AGT) AG 97448-97640 GT AGG (CTA) AG 97753-97857 GT CGG (GTA) AG 97978-98088 GT TGG (AGT) AG 98449-98534 GT AGG (TAC) AG 98773-98880 GT AGG (ATG) AG 99032-99145 GT AGG (GGT) AG 99271-99376 GT AGG (AGG) AG 99467-99639 GT CGG (GTG) AG 99734-99886 GT AGG (CCG) AG 100095-100190 GG GAG -recovered CodingQuarry_transcript_25754-T1, initial, 94099, 94240 -recovered CodingQuarry_transcript_25754-T1, initial, 99032, 99145 add_exon() Sorry, CodingQuarry_transcript_25754-T1 97448-97640-terminal-3 is invalid. -recovered CodingQuarry_transcript_25754-T1, terminal, 97448, 97640 -recovered CodingQuarry_transcript_25754-T1, terminal, 99271, 99376 -recovered CodingQuarry_transcript_25754-T1, terminal, 100095, 100190 -recovered CodingQuarry_transcript_25754-T1, internal, 94739, 94854 -recovered CodingQuarry_transcript_25754-T1, internal, 95969, 96042 -recovered CodingQuarry_transcript_25754-T1, internal, 96204, 96366 -recovered CodingQuarry_transcript_25754-T1, internal, 96576, 96665 -recovered CodingQuarry_transcript_25754-T1, internal, 96747, 96829 -recovered CodingQuarry_transcript_25754-T1, internal, 96983, 97050 -recovered CodingQuarry_transcript_25754-T1, internal, 97172, 97290 -recovered CodingQuarry_transcript_25754-T1, internal, 97448, 97640 -recovered CodingQuarry_transcript_25754-T1, internal, 97753, 97857 -recovered CodingQuarry_transcript_25754-T1, internal, 97978, 98088 -recovered CodingQuarry_transcript_25754-T1, internal, 98449, 98534 -recovered CodingQuarry_transcript_25754-T1, internal, 98773, 98880 -recovered CodingQuarry_transcript_25754-T1, internal, 99032, 99145 -recovered CodingQuarry_transcript_25754-T1, internal, 99271, 99376 -recovered CodingQuarry_transcript_25754-T1, internal, 99467, 99639 -recovered CodingQuarry_transcript_25754-T1, internal, 99734, 99886 Couldn't classify 83771, 83796 Sorry, prediction pasa_asmbl_22320.p1 fails validation. (GAA) GT 83771-83796 GT AGG (TGA) AG 84379-84450 GT AGG (GTG) AG 84727-84838 GT AGG (TGC) AG 85027-85129 GT AGG (ACA) AG 85284-85330 CT AAC -recovered pasa_asmbl_22320.p1, terminal, 85284, 85330 -recovered pasa_asmbl_22320.p1, internal, 84379, 84450 -recovered pasa_asmbl_22320.p1, internal, 84727, 84838 -recovered pasa_asmbl_22320.p1, internal, 85027, 85129 Valid prediction for Augustus_model.g29538.t1 Valid prediction for CodingQuarry_transcript_25753-T1 Valid prediction for GlimmerHMM_glimmerT_44534-T1 Valid prediction for snap_scaffold_19-snap.1706-T1 Valid prediction for snap_scaffold_19-snap.1695-T1 Valid prediction for GlimmerHMM_glimmerT_44537-T1 Valid prediction for snap_scaffold_19-snap.1683-T1 Valid prediction for GlimmerHMM_glimmerT_44522-T1 Valid prediction for snap_scaffold_19-snap.1688-T1 Valid prediction for Augustus_model.g29557.t1 Couldn't classify 143514, 143534 Sorry, prediction pasa_asmbl_22312.p1 fails validation. (TTC) CC 143514-143534 GT AGG (GTG) AG 143918-144119 GT AGG (GGA) AG 144275-144567 AG AAA -recovered pasa_asmbl_22312.p1, terminal, 144275, 144567 -recovered pasa_asmbl_22312.p1, internal, 143918, 144119 Couldn't classify 35153, 35306 Couldn't classify 36045, 36358 Sorry, prediction pasa_asmbl_22324.p1 fails validation. (CTT) CC 35153-35306 GT AGG (AGT) AG 36045-36358 TC CCT Valid prediction for snap_scaffold_19-snap.1699-T1 Valid prediction for GlimmerHMM_glimmerT_44545-T1 Valid prediction for snap_scaffold_19-snap.1689-T1 Valid prediction for GlimmerHMM_glimmerT_44521-T1 Valid prediction for Augustus_model.g29537.t1 Valid prediction for Augustus_model.g29556.t1 Valid prediction for Augustus_model.g29552.t1 Valid prediction for snap_scaffold_19-snap.1713-T1 Valid prediction for GlimmerHMM_glimmerT_44539-T1 Valid prediction for GlimmerHMM_glimmerT_44527-T1 Valid prediction for snap_scaffold_19-snap.1686-T1 Valid prediction for snap_scaffold_19-snap.1705-T1 Valid prediction for Augustus_model.g29541.t1 Valid prediction for snap_scaffold_19-snap.1708-T1 Valid prediction for GlimmerHMM_glimmerT_44531-T1 Valid prediction for snap_scaffold_19-snap.1714-T1 Valid prediction for Augustus_model.g29545.t1 Valid prediction for snap_scaffold_19-snap.1707-T1 Valid prediction for Augustus_model.g29553.t1 Valid prediction for snap_scaffold_19-snap.1685-T1 Valid prediction for snap_scaffold_19-snap.1720-T1 Valid prediction for Augustus_model.g29551.t1 Valid prediction for snap_scaffold_19-snap.1715-T1 Valid prediction for Augustus_model.g29554.t1 Valid prediction for snap_scaffold_19-snap.1700-T1 Valid prediction for snap_scaffold_19-snap.1698-T1 Valid prediction for pasa_asmbl_22315.p1 Valid prediction for GlimmerHMM_glimmerT_44532-T1 Valid prediction for snap_scaffold_19-snap.1710-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 13503, rend_intergenic: 10532 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17227, rend_intergenic: 14522 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25997, rend_intergenic: 17667 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46571, rend_intergenic: 43227 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52403, rend_intergenic: 48773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73982, rend_intergenic: 71109 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130453, rend_intergenic: 129021 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139201, rend_intergenic: 131796 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171495, rend_intergenic: 148774 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172300, rend_intergenic: 171743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179101, rend_intergenic: 173712 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 182573 -exon list size: 462 building trellis 0.2 0.4 0.6 0.9 1.1 1.3 1.5 1.7 1.9 2.2 2.4 2.6 2.8 3.0 3.2 3.4 3.7 3.9 4.1 4.3 4.5 4.7 5.0 5.2 5.4 5.6 5.8 6.0 6.2 6.5 6.7 6.9 7.1 7.3 7.5 7.8 8.0 8.2 8.4 8.6 8.8 9.1 9.3 9.5 9.7 9.9 10.1 10.3 10.6 10.8 11.0 11.2 11.4 11.6 11.9 12.1 12.3 12.5 12.7 12.9 13.1 13.4 13.6 13.8 14.0 14.2 14.4 14.7 14.9 15.1 15.3 15.5 15.7 15.9 16.2 16.4 16.6 16.8 17.0 17.2 17.5 17.7 17.9 18.1 18.3 18.5 18.8 19.0 19.2 19.4 19.6 19.8 20.0 20.3 20.5 20.7 20.9 21.1 21.3 21.6 21.8 22.0 22.2 22.4 22.6 22.8 23.1 23.3 23.5 23.7 23.9 24.1 24.4 24.6 24.8 25.0 25.2 25.4 25.6 25.9 26.1 26.3 26.5 26.7 26.9 27.2 27.4 27.6 27.8 28.0 28.2 28.4 28.7 28.9 29.1 29.3 29.5 29.7 30.0 30.2 30.4 30.6 30.8 31.0 31.2 31.5 31.7 31.9 32.1 32.3 32.5 32.8 33.0 33.2 33.4 33.6 33.8 34.1 34.3 34.5 34.7 34.9 35.1 35.3 35.6 35.8 36.0 36.2 36.4 36.6 36.9 37.1 37.3 37.5 37.7 37.9 38.1 38.4 38.6 38.8 39.0 39.2 39.4 39.7 39.9 40.1 40.3 40.5 40.7 40.9 41.2 41.4 41.6 41.8 42.0 42.2 42.5 42.7 42.9 43.1 43.3 43.5 43.8 44.0 44.2 44.4 44.6 44.8 45.0 45.3 45.5 45.7 45.9 46.1 46.3 46.6 46.8 47.0 47.2 47.4 47.6 47.8 48.1 48.3 48.5 48.7 48.9 49.1 49.4 49.6 49.8 50.0 50.2 50.4 50.6 50.9 51.1 51.3 51.5 51.7 51.9 52.2 52.4 52.6 52.8 53.0 53.2 53.4 53.7 53.9 54.1 54.3 54.5 54.7 55.0 55.2 55.4 55.6 55.8 56.0 56.2 56.5 56.7 56.9 57.1 57.3 57.5 57.8 58.0 58.2 58.4 58.6 58.8 59.1 59.3 59.5 59.7 59.9 60.1 60.3 60.6 60.8 61.0 61.2 61.4 61.6 61.9 62.1 62.3 62.5 62.7 62.9 63.1 63.4 63.6 63.8 64.0 64.2 64.4 64.7 64.9 65.1 65.3 65.5 65.7 65.9 66.2 66.4 66.6 66.8 67.0 67.2 67.5 67.7 67.9 68.1 68.3 68.5 68.8 69.0 69.2 69.4 69.6 69.8 70.0 70.3 70.5 70.7 70.9 71.1 71.3 71.6 71.8 72.0 72.2 72.4 72.6 72.8 73.1 73.3 73.5 73.7 73.9 74.1 74.4 74.6 74.8 75.0 75.2 75.4 75.6 75.9 76.1 76.3 76.5 76.7 76.9 77.2 77.4 77.6 77.8 78.0 78.2 78.4 78.7 78.9 79.1 79.3 79.5 79.7 80.0 80.2 80.4 80.6 80.8 81.0 81.2 81.5 81.7 81.9 82.1 82.3 82.5 82.8 83.0 83.2 83.4 83.6 83.8 84.1 84.3 84.5 84.7 84.9 85.1 85.3 85.6 85.8 86.0 86.2 86.4 86.6 86.9 87.1 87.3 87.5 87.7 87.9 88.1 88.4 88.6 88.8 89.0 89.2 89.4 89.7 89.9 90.1 90.3 90.5 90.7 90.9 91.2 91.4 91.6 91.8 92.0 92.2 92.5 92.7 92.9 93.1 93.3 93.5 93.8 94.0 94.2 94.4 94.6 94.8 95.0 95.3 95.5 95.7 95.9 96.1 96.3 96.6 96.8 97.0 97.2 97.4 97.6 97.8 98.1 98.3 98.5 98.7 98.9 99.1 99.4 99.6 99.8 -found 33 predictions from path traversal Error with prediction: snap lend_intergenic: 13503, rend_intergenic: 10532 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17227, rend_intergenic: 14522 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25997, rend_intergenic: 17667 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46571, rend_intergenic: 43227 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52403, rend_intergenic: 48773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73982, rend_intergenic: 71109 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130453, rend_intergenic: 129021 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139201, rend_intergenic: 131796 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171495, rend_intergenic: 148774 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172300, rend_intergenic: 171743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179101, rend_intergenic: 173712 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 27 predictions persist after filtering for low support -building DP trellis -building trellis in range 171496 - 182573 -exon list size: 10 building trellis 8.3 16.7 25.0 33.3 41.7 50.0 58.3 66.7 75.0 83.3 91.7 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support