-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_19/scaffold_19_7331346-7630243

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_19-snap.1474-T1
Valid prediction for GlimmerHMM_glimmerT_44369-T1
Valid prediction for snap_scaffold_19-snap.1475-T1
Valid prediction for Augustus_model.g29411.t1
Valid prediction for snap_scaffold_19-snap.1444-T1
Valid prediction for GlimmerHMM_glimmerT_44347-T1
Valid prediction for GlimmerHMM_glimmerT_44350-T1
Couldn't classify 46533, 46646
Couldn't classify 46942, 47088
Sorry, prediction pasa_asmbl_21969.p1 fails validation.
(GGA)	 GG	46533-46646	GT	AAG
(AAC)	 AG	46736-46801	GT	AGG
(ATC)	 AG	46942-47088	CT	TGC
-recovered pasa_asmbl_21969.p1, internal, 46736, 46801
Valid prediction for GlimmerHMM_glimmerT_44357-T1
Valid prediction for snap_scaffold_19-snap.1438-T1
Valid prediction for snap_scaffold_19-snap.1488-T1
Valid prediction for GlimmerHMM_glimmerT_44354-T1
Valid prediction for GlimmerHMM_glimmerT_44341-T1
Couldn't classify 242033, 242128
Couldn't classify 246013, 246039
Sorry, prediction pasa_asmbl_21469.p1 fails validation.
(AGA)	 GG	242033-242128	GT	CAG
(GCG)	 AG	242541-242659	GT	AAG
(GTG)	 AG	243661-243790	GT	AGG
(GTT)	 AG	243893-243972	GT	AGG
(ACA)	 AG	244185-244348	GT	AGG
(ACA)	 AG	245429-245487	GT	AGG
(GGA)	 AG	246013-246039	AG	GGA
-recovered pasa_asmbl_21469.p1, internal, 242541, 242659
-recovered pasa_asmbl_21469.p1, internal, 243661, 243790
-recovered pasa_asmbl_21469.p1, internal, 243893, 243972
-recovered pasa_asmbl_21469.p1, internal, 244185, 244348
-recovered pasa_asmbl_21469.p1, internal, 245429, 245487
Valid prediction for snap_scaffold_19-snap.1447-T1
Valid prediction for GlimmerHMM_glimmerT_44360-T1
Valid prediction for CodingQuarry_transcript_25698-T1
Valid prediction for Augustus_model.g29403.t1
Valid prediction for snap_scaffold_19-snap.1440-T1
Valid prediction for GlimmerHMM_glimmerT_44363-T1
Couldn't classify 123653, 123692
Sorry, prediction pasa_asmbl_21893.p1 fails validation.
(GGA)	 CA	123653-123692	GT	TCG
(AGG)	 AG	123822-123872	GT	AGG
(GTA)	 AG	124868-124906	GT	AGG
(GGG)	 AG	125058-125236	AA	GAA
-recovered pasa_asmbl_21893.p1, terminal, 125058, 125236
-recovered pasa_asmbl_21893.p1, internal, 123822, 123872
-recovered pasa_asmbl_21893.p1, internal, 124868, 124906
Valid prediction for Augustus_model.g29397.t1
Valid prediction for snap_scaffold_19-snap.1455-T1
Valid prediction for snap_scaffold_19-snap.1485-T1
Valid prediction for GlimmerHMM_glimmerT_44333-T1
Valid prediction for snap_scaffold_19-snap.1465-T1
Valid prediction for Augustus_model.g29402.t1
Valid prediction for GlimmerHMM_glimmerT_44348-T1
Valid prediction for snap_scaffold_19-snap.1428-T1
Valid prediction for HiQ_model.g29418.t1
Valid prediction for Augustus_model.g29399.t1
Valid prediction for HiQ_model.g29416.t1
Valid prediction for snap_scaffold_19-snap.1450-T1
Valid prediction for Augustus_model.g29406.t1
Valid prediction for Augustus_model.g29398.t1
Valid prediction for snap_scaffold_19-snap.1463-T1
Valid prediction for Augustus_model.g29391.t1
Couldn't classify 94304, 94336
Sorry, prediction pasa_asmbl_21453.p1 fails validation.
(AAG)	 AT	94304-94336	GT	ACG
(TAT)	 AG	94606-94761	GT	GGG
(CAA)	 AG	94841-94990	GC	AGG
-recovered pasa_asmbl_21453.p1, terminal, 94841, 94990
-recovered pasa_asmbl_21453.p1, internal, 94606, 94761
-recovered pasa_asmbl_21453.p1, internal, 94841, 94990
Couldn't classify 165189, 165269
Couldn't classify 170732, 170756
Sorry, prediction pasa_asmbl_21460.p1 fails validation.
(GGG)	 GA	165189-165269	GT	AGG
(GCC)	 AG	166801-166890	GT	AGG
(TCG)	 AG	169690-169810	GT	GGG
(TAG)	 AG	170032-170177	GT	TGG
(GCC)	 AG	170434-170636	GT	AGG
(GGG)	 AG	170732-170756	GA	GTG
-recovered pasa_asmbl_21460.p1, internal, 166801, 166890
-recovered pasa_asmbl_21460.p1, internal, 169690, 169810
-recovered pasa_asmbl_21460.p1, internal, 170032, 170177
-recovered pasa_asmbl_21460.p1, internal, 170434, 170636
Valid prediction for Augustus_model.g29420.t1
Valid prediction for HiQ_model.g29400.t1
Valid prediction for snap_scaffold_19-snap.1481-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for HiQ_model.g29421.t1
Valid prediction for Augustus_model.g29417.t1
Valid prediction for snap_scaffold_19-snap.1457-T1
Valid prediction for snap_scaffold_19-snap.1484-T1
Valid prediction for CodingQuarry_transcript_25706-T1
Valid prediction for snap_scaffold_19-snap.1476-T1
Valid prediction for GlimmerHMM_glimmerT_44345-T1
Valid prediction for snap_scaffold_19-snap.1436-T1
Valid prediction for Augustus_model.g29419.t1
Valid prediction for GlimmerHMM_glimmerT_44338-T1
Valid prediction for GlimmerHMM_glimmerT_44362-T1
Valid prediction for HiQ_model.g29396.t1
Valid prediction for GlimmerHMM_glimmerT_44359-T1
Valid prediction for snap_scaffold_19-snap.1459-T1
Valid prediction for snap_scaffold_19-snap.1432-T1
Valid prediction for snap_scaffold_19-snap.1472-T1
Valid prediction for GlimmerHMM_glimmerT_44329-T1
Couldn't classify 32474, 33199
Sorry, prediction pasa_asmbl_21451.p1 fails validation.
(ACG)	 CC	32474-33199	GT	TGG
(CTC)	 AG	33352-33384	TG	GAT
-recovered pasa_asmbl_21451.p1, terminal, 33352, 33384
Valid prediction for GlimmerHMM_glimmerT_44371-T1
Valid prediction for snap_scaffold_19-snap.1460-T1
Valid prediction for snap_scaffold_19-snap.1487-T1
Valid prediction for HiQ_model.g29389.t1
Valid prediction for Augustus_model.g29393.t1
Valid prediction for snap_scaffold_19-snap.1451-T1
Valid prediction for pasa_asmbl_21472.p1
Valid prediction for Augustus_model.g29407.t1
Valid prediction for snap_scaffold_19-snap.1434-T1
Valid prediction for GlimmerHMM_glimmerT_44361-T1
Valid prediction for pasa_asmbl_21482.p1
Valid prediction for Augustus_model.g29408.t1
Valid prediction for CodingQuarry_transcript_25705-T1
Valid prediction for GlimmerHMM_glimmerT_44352-T1
Couldn't classify 43516, 43559
Couldn't classify 44960, 44995
Sorry, prediction pasa_asmbl_21452.p1 fails validation.
(TTT)	 TC	43516-43559	GT	ATG
(CAA)	 AG	43684-43810	GT	AAG
(GTG)	 AG	43904-44026	GT	AGG
(GAC)	 AG	44110-44206	GT	GGG
(ATG)	 AG	44305-44429	GT	AGG
(GAA)	 AG	44543-44676	GT	AAG
(GAC)	 AG	44760-44847	GT	AGG
(GTG)	 AG	44960-44995	GA	TCG
add_exon() Sorry, pasa_asmbl_21452.p1 44305-44429-initial-1 is invalid.
-recovered pasa_asmbl_21452.p1, initial, 44305, 44429
-recovered pasa_asmbl_21452.p1, internal, 43684, 43810
-recovered pasa_asmbl_21452.p1, internal, 43904, 44026
-recovered pasa_asmbl_21452.p1, internal, 44110, 44206
-recovered pasa_asmbl_21452.p1, internal, 44305, 44429
-recovered pasa_asmbl_21452.p1, internal, 44543, 44676
-recovered pasa_asmbl_21452.p1, internal, 44760, 44847
Valid prediction for snap_scaffold_19-snap.1470-T1
Valid prediction for GlimmerHMM_glimmerT_44334-T1
Valid prediction for snap_scaffold_19-snap.1429-T1
Valid prediction for snap_scaffold_19-snap.1431-T1
Valid prediction for GlimmerHMM_glimmerT_44370-T1
Valid prediction for snap_scaffold_19-snap.1433-T1
Valid prediction for snap_scaffold_19-snap.1473-T1
Valid prediction for snap_scaffold_19-snap.1467-T1
Valid prediction for snap_scaffold_19-snap.1464-T1
Valid prediction for GlimmerHMM_glimmerT_44339-T1
Valid prediction for GlimmerHMM_glimmerT_44353-T1
Valid prediction for GlimmerHMM_glimmerT_44343-T1
Valid prediction for snap_scaffold_19-snap.1430-T1
Valid prediction for CodingQuarry_transcript_25701-T1
Valid prediction for snap_scaffold_19-snap.1445-T1
Valid prediction for HiQ_model.g29410.t1
Valid prediction for Augustus_model.g29387.t1
Couldn't classify 229777, 230196
Sorry, prediction pasa_asmbl_21466.p1 fails validation.
(TGT)	 CA	229777-230196	GT	AGG
(CTA)	 AG	230373-230506	GT	AAG
(ATC)	 AG	230777-230828	GT	AGG
(GAG)	 AG	231226-231345	GT	AGG
(ATG)	 AG	231647-231815	GT	AGG
(ATG)	 AG	232491-232628	GT	AGG
(AAA)	 AG	232986-233062	TG	AGT
-recovered pasa_asmbl_21466.p1, initial, 231647, 231815
add_exon() Sorry, pasa_asmbl_21466.p1 232491-232628-initial-1 is invalid.
-recovered pasa_asmbl_21466.p1, initial, 232491, 232628
-recovered pasa_asmbl_21466.p1, terminal, 232986, 233062
-recovered pasa_asmbl_21466.p1, internal, 230373, 230506
-recovered pasa_asmbl_21466.p1, internal, 230777, 230828
-recovered pasa_asmbl_21466.p1, internal, 231226, 231345
-recovered pasa_asmbl_21466.p1, internal, 231647, 231815
-recovered pasa_asmbl_21466.p1, internal, 232491, 232628
Valid prediction for GlimmerHMM_glimmerT_44330-T1
Valid prediction for GlimmerHMM_glimmerT_44342-T1
Valid prediction for snap_scaffold_19-snap.1443-T1
Valid prediction for pasa_asmbl_21481.p1
Valid prediction for snap_scaffold_19-snap.1448-T1
Valid prediction for GlimmerHMM_glimmerT_44356-T1
Valid prediction for snap_scaffold_19-snap.1486-T1
Valid prediction for GlimmerHMM_glimmerT_44340-T1
Valid prediction for Augustus_model.g29404.t1
Valid prediction for Augustus_model.g29388.t1
Couldn't classify 171201, 171468
Sorry, prediction pasa_asmbl_21462.p2 fails validation.
(ATG)	 TG	170814-170841	GT	AAG
(TGA)	 AG	170959-171100	GT	ACG
(AAA)	 AG	171201-171468	TT	CCT
-recovered pasa_asmbl_21462.p2, initial, 170814, 170841
-recovered pasa_asmbl_21462.p2, internal, 170959, 171100
Valid prediction for snap_scaffold_19-snap.1437-T1
Valid prediction for pasa_asmbl_21473.p1
Valid prediction for GlimmerHMM_glimmerT_44331-T1
Valid prediction for snap_scaffold_19-snap.1452-T1
Valid prediction for snap_scaffold_19-snap.1461-T1
Valid prediction for CodingQuarry_transcript_25700-T1
Valid prediction for snap_scaffold_19-snap.1469-T1
Couldn't classify 171883, 173094
Sorry, prediction pasa_asmbl_21463.p1 fails validation.
(CCT)	 TA	171883-173094	GT	AGG
(ATC)	 AG	173547-173654	GT	AGG
-recovered pasa_asmbl_21463.p1, terminal, 173547, 173654
-recovered pasa_asmbl_21463.p1, internal, 173547, 173654

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g29409.t1
Couldn't classify 35492, 35611
Sorry, prediction pasa_asmbl_22248.p1 fails validation.
(CTT)	 AA	35492-35611	GT	TGG
(CAA)	 AG	35749-36129	AC	AAA
-recovered pasa_asmbl_22248.p1, terminal, 35749, 36129
Valid prediction for GlimmerHMM_glimmerT_44367-T1
Valid prediction for GlimmerHMM_glimmerT_44358-T1
Valid prediction for snap_scaffold_19-snap.1478-T1
Valid prediction for GlimmerHMM_glimmerT_44346-T1
Valid prediction for GlimmerHMM_glimmerT_44365-T1
Valid prediction for snap_scaffold_19-snap.1482-T1
Valid prediction for snap_scaffold_19-snap.1449-T1
Valid prediction for pasa_asmbl_22678.p1
Valid prediction for GlimmerHMM_glimmerT_44355-T1
Valid prediction for Augustus_model.g29415.t1
Valid prediction for snap_scaffold_19-snap.1480-T1
Valid prediction for CodingQuarry_transcript_25697-T1
Valid prediction for pasa_asmbl_22247.p1
Valid prediction for Augustus_model.g29401.t1
Valid prediction for snap_scaffold_19-snap.1458-T1
Valid prediction for snap_scaffold_19-snap.1441-T1
Valid prediction for GlimmerHMM_glimmerT_44335-T1
Valid prediction for snap_scaffold_19-snap.1439-T1
Valid prediction for snap_scaffold_19-snap.1479-T1
Valid prediction for snap_scaffold_19-snap.1453-T1
Valid prediction for snap_scaffold_19-snap.1446-T1
Valid prediction for CodingQuarry_transcript_25702-T1
Valid prediction for GlimmerHMM_glimmerT_44337-T1
Valid prediction for GlimmerHMM_glimmerT_44349-T1
Valid prediction for pasa_asmbl_22241.p1
Valid prediction for GlimmerHMM_glimmerT_44368-T1
Valid prediction for Augustus_model.g29405.t1
Valid prediction for GlimmerHMM_glimmerT_44344-T1
Valid prediction for snap_scaffold_19-snap.1489-T1
Valid prediction for HiQ_model.g29392.t1
Valid prediction for GlimmerHMM_glimmerT_44366-T1
Valid prediction for GlimmerHMM_glimmerT_44364-T1
Valid prediction for snap_scaffold_19-snap.1442-T1
Valid prediction for CodingQuarry_transcript_25703-T1
Valid prediction for Augustus_model.g29414.t1
Valid prediction for GlimmerHMM_glimmerT_44351-T1
Valid prediction for HiQ_model.g29394.t1
Valid prediction for snap_scaffold_19-snap.1483-T1
Valid prediction for GlimmerHMM_glimmerT_44332-T1
Valid prediction for HiQ_model.g29412.t1
Couldn't classify 222388, 222642
Sorry, prediction pasa_asmbl_22243.p1 fails validation.
(GAT)	 GA	222388-222642	GT	AGG
(TCA)	 AG	222822-223046	GA	GAG
-recovered pasa_asmbl_22243.p1, terminal, 222822, 223046
Valid prediction for snap_scaffold_19-snap.1477-T1
Valid prediction for snap_scaffold_19-snap.1435-T1
Valid prediction for Augustus_model.g29395.t1
Couldn't classify 215992, 216043
Couldn't classify 216161, 218532
Sorry, prediction pasa_asmbl_22244.p1 fails validation.
(CTC)	 CA	215992-216043	GT	AGG
(TGC)	 AG	216161-218532	AT	TCA
Valid prediction for snap_scaffold_19-snap.1471-T1
Valid prediction for snap_scaffold_19-snap.1454-T1
Valid prediction for snap_scaffold_19-snap.1466-T1
Valid prediction for HiQ_model.g29390.t1
Valid prediction for snap_scaffold_19-snap.1456-T1
Valid prediction for GlimmerHMM_glimmerT_44336-T1
Couldn't classify 28380, 28388
Couldn't classify 30656, 30694
Sorry, prediction pasa_asmbl_22249.p1 fails validation.
(ATT)	 GC	28380-28388	GT	AGG
(GAA)	 AG	28477-28608	GT	TGG
(GTC)	 AG	28772-28833	GT	GAG
(GTA)	 AG	28920-29049	GT	TGG
(GGG)	 AG	29356-29517	GT	TGG
(GCT)	 AG	29833-29876	GT	AGG
(GAG)	 AG	30286-30424	GT	AGG
(GTG)	 AG	30656-30694	TA	CCT
-recovered pasa_asmbl_22249.p1, internal, 28477, 28608
-recovered pasa_asmbl_22249.p1, internal, 28772, 28833
-recovered pasa_asmbl_22249.p1, internal, 28920, 29049
-recovered pasa_asmbl_22249.p1, internal, 29356, 29517
-recovered pasa_asmbl_22249.p1, internal, 29833, 29876
-recovered pasa_asmbl_22249.p1, internal, 30286, 30424
Valid prediction for snap_scaffold_19-snap.1462-T1
Valid prediction for snap_scaffold_19-snap.1468-T1
Valid prediction for HiQ_model.g29413.t1
Valid prediction for CodingQuarry_transcript_25696-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 152643, rend_intergenic: 146119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154095, rend_intergenic: 153010  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156374, rend_intergenic: 154231  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158671, rend_intergenic: 157937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160241, rend_intergenic: 158971  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171983, rend_intergenic: 160267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190008, rend_intergenic: 188269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210253, rend_intergenic: 205072  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 298898
-exon list size: 614


building trellis

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46.9    
47.1    
47.2    
47.4    
47.6    
47.7    
47.9    
48.1    
48.2    
48.4    
48.5    
48.7    
48.9    
49.0    
49.2    
49.4    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.6    
50.8    
51.0    
51.1    
51.3    
51.5    
51.6    
51.8    
51.9    
52.1    
52.3    
52.4    
52.6    
52.8    
52.9    
53.1    
53.2    
53.4    
53.6    
53.7    
53.9    
54.1    
54.2    
54.4    
54.5    
54.7    
54.9    
55.0    
55.2    
55.4    
55.5    
55.7    
55.8    
56.0    
56.2    
56.3    
56.5    
56.7    
56.8    
57.0    
57.1    
57.3    
57.5    
57.6    
57.8    
58.0    
58.1    
58.3    
58.4    
58.6    
58.8    
58.9    
59.1    
59.3    
59.4    
59.6    
59.7    
59.9    
60.1    
60.2    
60.4    
60.6    
60.7    
60.9    
61.0    
61.2    
61.4    
61.5    
61.7    
61.9    
62.0    
62.2    
62.3    
62.5    
62.7    
62.8    
63.0    
63.1    
63.3    
63.5    
63.6    
63.8    
64.0    
64.1    
64.3    
64.4    
64.6    
64.8    
64.9    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.1    
66.2    
66.4    
66.6    
66.7    
66.9    
67.0    
67.2    
67.4    
67.5    
67.7    
67.9    
68.0    
68.2    
68.3    
68.5    
68.7    
68.8    
69.0    
69.2    
69.3    
69.5    
69.6    
69.8    
70.0    
70.1    
70.3    
70.5    
70.6    
70.8    
70.9    
71.1    
71.3    
71.4    
71.6    
71.8    
71.9    
72.1    
72.2    
72.4    
72.6    
72.7    
72.9    
73.1    
73.2    
73.4    
73.5    
73.7    
73.9    
74.0    
74.2    
74.4    
74.5    
74.7    
74.8    
75.0    
75.2    
75.3    
75.5    
75.6    
75.8    
76.0    
76.1    
76.3    
76.5    
76.6    
76.8    
76.9    
77.1    
77.3    
77.4    
77.6    
77.8    
77.9    
78.1    
78.2    
78.4    
78.6    
78.7    
78.9    
79.1    
79.2    
79.4    
79.5    
79.7    
79.9    
80.0    
80.2    
80.4    
80.5    
80.7    
80.8    
81.0    
81.2    
81.3    
81.5    
81.7    
81.8    
82.0    
82.1    
82.3    
82.5    
82.6    
82.8    
83.0    
83.1    
83.3    
83.4    
83.6    
83.8    
83.9    
84.1    
84.3    
84.4    
84.6    
84.7    
84.9    
85.1    
85.2    
85.4    
85.6    
85.7    
85.9    
86.0    
86.2    
86.4    
86.5    
86.7    
86.9    
87.0    
87.2    
87.3    
87.5    
87.7    
87.8    
88.0    
88.1    
88.3    
88.5    
88.6    
88.8    
89.0    
89.1    
89.3    
89.4    
89.6    
89.8    
89.9    
90.1    
90.3    
90.4    
90.6    
90.7    
90.9    
91.1    
91.2    
91.4    
91.6    
91.7    
91.9    
92.0    
92.2    
92.4    
92.5    
92.7    
92.9    
93.0    
93.2    
93.3    
93.5    
93.7    
93.8    
94.0    
94.2    
94.3    
94.5    
94.6    
94.8    
95.0    
95.1    
95.3    
95.5    
95.6    
95.8    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
96.9    
97.1    
97.2    
97.4    
97.6    
97.7    
97.9    
98.1    
98.2    
98.4    
98.5    
98.7    
98.9    
99.0    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 49 predictions from path traversal
Error with prediction: snap lend_intergenic: 152643, rend_intergenic: 146119  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154095, rend_intergenic: 153010  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156374, rend_intergenic: 154231  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158671, rend_intergenic: 157937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160241, rend_intergenic: 158971  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171983, rend_intergenic: 160267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190008, rend_intergenic: 188269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210253, rend_intergenic: 205072  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 42 predictions persist after filtering for low support