-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_19/scaffold_19_5805283-6115636

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_19-snap.1266-T1
Valid prediction for Augustus_model.g29290.t1
Valid prediction for snap_scaffold_19-snap.1265-T1
Valid prediction for pasa_asmbl_21387.p1
Valid prediction for GlimmerHMM_glimmerT_44185-T1
Valid prediction for snap_scaffold_19-snap.1214-T1
Valid prediction for GlimmerHMM_glimmerT_44203-T1
Valid prediction for GlimmerHMM_glimmerT_44212-T1
Valid prediction for Augustus_model.g29306.t1
Valid prediction for snap_scaffold_19-snap.1219-T1
Valid prediction for Augustus_model.g29300.t1
Valid prediction for Augustus_model.g29293.t1
Valid prediction for Augustus_model.g29307.t1
Valid prediction for snap_scaffold_19-snap.1242-T1
Valid prediction for Augustus_model.g29297.t1
Valid prediction for Augustus_model.g29295.t1
Valid prediction for snap_scaffold_19-snap.1240-T1
Valid prediction for CodingQuarry_transcript_25670-T1
Valid prediction for snap_scaffold_19-snap.1227-T1
Valid prediction for Augustus_model.g29291.t1
Valid prediction for Augustus_model.g29303.t1
Valid prediction for snap_scaffold_19-snap.1235-T1
Valid prediction for snap_scaffold_19-snap.1251-T1
Valid prediction for Augustus_model.g29298.t1
Valid prediction for GlimmerHMM_glimmerT_44197-T1
Valid prediction for GlimmerHMM_glimmerT_44210-T1
Valid prediction for GlimmerHMM_glimmerT_44193-T1
Valid prediction for GlimmerHMM_glimmerT_44190-T1
Valid prediction for Augustus_model.g29308.t1
Valid prediction for HiQ_model.g29310.t1
Valid prediction for snap_scaffold_19-snap.1246-T1
Valid prediction for GlimmerHMM_glimmerT_44202-T1
Valid prediction for GlimmerHMM_glimmerT_44208-T1
Valid prediction for snap_scaffold_19-snap.1262-T1
Valid prediction for snap_scaffold_19-snap.1241-T1
Valid prediction for GlimmerHMM_glimmerT_44199-T1
Valid prediction for GlimmerHMM_glimmerT_44191-T1
Valid prediction for Augustus_model.g29311.t1
Valid prediction for snap_scaffold_19-snap.1222-T1
Valid prediction for GlimmerHMM_glimmerT_44215-T1
Valid prediction for snap_scaffold_19-snap.1252-T1
Valid prediction for snap_scaffold_19-snap.1224-T1
Valid prediction for snap_scaffold_19-snap.1259-T1
Valid prediction for snap_scaffold_19-snap.1233-T1
Valid prediction for GlimmerHMM_glimmerT_44211-T1
Valid prediction for Augustus_model.g29292.t1
Valid prediction for Augustus_model.g29296.t1
Valid prediction for GlimmerHMM_glimmerT_44214-T1
Valid prediction for snap_scaffold_19-snap.1239-T1
Valid prediction for snap_scaffold_19-snap.1248-T1
Valid prediction for snap_scaffold_19-snap.1264-T1
Valid prediction for Augustus_model.g29294.t1
Valid prediction for snap_scaffold_19-snap.1256-T1
Valid prediction for snap_scaffold_19-snap.1230-T1
Valid prediction for snap_scaffold_19-snap.1213-T1
Valid prediction for GlimmerHMM_glimmerT_44204-T1
Valid prediction for GlimmerHMM_glimmerT_44205-T1
Valid prediction for Augustus_model.g29302.t1
Valid prediction for snap_scaffold_19-snap.1226-T1
Valid prediction for snap_scaffold_19-snap.1244-T1
Valid prediction for GlimmerHMM_glimmerT_44192-T1
Valid prediction for Augustus_model.g29299.t1
Valid prediction for Augustus_model.g29304.t1
Valid prediction for GlimmerHMM_glimmerT_44209-T1
Valid prediction for snap_scaffold_19-snap.1261-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_44200-T1
Valid prediction for snap_scaffold_19-snap.1229-T1
Valid prediction for snap_scaffold_19-snap.1253-T1
Valid prediction for snap_scaffold_19-snap.1228-T1
Valid prediction for snap_scaffold_19-snap.1249-T1
Valid prediction for GlimmerHMM_glimmerT_44195-T1
Couldn't classify 118532, 118725
Sorry, prediction pasa_asmbl_22730.p1 fails validation.
(CTC)	 CT	118532-118725	GT	AGG
(GTA)	 AG	118907-119003	GT	TGG
(CCG)	 AG	119109-119212	GT	GGG
(GGA)	 AG	119426-119570	CC	GAC
-recovered pasa_asmbl_22730.p1, terminal, 119426, 119570
-recovered pasa_asmbl_22730.p1, internal, 118907, 119003
-recovered pasa_asmbl_22730.p1, internal, 119109, 119212
Valid prediction for snap_scaffold_19-snap.1263-T1
Valid prediction for GlimmerHMM_glimmerT_44186-T1
Valid prediction for snap_scaffold_19-snap.1258-T1
Valid prediction for Augustus_model.g29309.t1
Valid prediction for snap_scaffold_19-snap.1221-T1
Couldn't classify 20962, 21633
Sorry, prediction pasa_asmbl_22188.p1 fails validation.
(AGC)	 CC	20962-21633	GT	GAG
Valid prediction for GlimmerHMM_glimmerT_44201-T1
Valid prediction for snap_scaffold_19-snap.1232-T1
Valid prediction for snap_scaffold_19-snap.1247-T1
Valid prediction for snap_scaffold_19-snap.1234-T1
Valid prediction for snap_scaffold_19-snap.1250-T1
Valid prediction for snap_scaffold_19-snap.1231-T1
Valid prediction for GlimmerHMM_glimmerT_44206-T1
Valid prediction for snap_scaffold_19-snap.1257-T1
Valid prediction for GlimmerHMM_glimmerT_44194-T1
Valid prediction for snap_scaffold_19-snap.1223-T1
Valid prediction for snap_scaffold_19-snap.1217-T1
Valid prediction for GlimmerHMM_glimmerT_44189-T1
Valid prediction for snap_scaffold_19-snap.1218-T1
Valid prediction for GlimmerHMM_glimmerT_44184-T1
Valid prediction for snap_scaffold_19-snap.1237-T1
Valid prediction for snap_scaffold_19-snap.1236-T1
Valid prediction for GlimmerHMM_glimmerT_44188-T1
Valid prediction for snap_scaffold_19-snap.1220-T1
Valid prediction for Augustus_model.g29305.t1
Valid prediction for GlimmerHMM_glimmerT_44213-T1
Valid prediction for GlimmerHMM_glimmerT_44187-T1
Valid prediction for snap_scaffold_19-snap.1260-T1
Valid prediction for GlimmerHMM_glimmerT_44207-T1
Valid prediction for snap_scaffold_19-snap.1245-T1
Valid prediction for snap_scaffold_19-snap.1238-T1
Valid prediction for GlimmerHMM_glimmerT_44198-T1
Valid prediction for snap_scaffold_19-snap.1255-T1
Valid prediction for GlimmerHMM_glimmerT_44196-T1
Valid prediction for snap_scaffold_19-snap.1254-T1
Valid prediction for GlimmerHMM_glimmerT_44183-T1
Valid prediction for snap_scaffold_19-snap.1215-T1
Valid prediction for snap_scaffold_19-snap.1225-T1
Valid prediction for snap_scaffold_19-snap.1243-T1
Valid prediction for snap_scaffold_19-snap.1216-T1
Valid prediction for Augustus_model.g29301.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 49099, rend_intergenic: 10594  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62796, rend_intergenic: 49854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71509, rend_intergenic: 70551  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80945, rend_intergenic: 71700  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82663, rend_intergenic: 81388  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90503, rend_intergenic: 82993  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100926, rend_intergenic: 95128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103837, rend_intergenic: 100968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115374, rend_intergenic: 107474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121114, rend_intergenic: 115380  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137903, rend_intergenic: 130117  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150604, rend_intergenic: 138076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181449, rend_intergenic: 151009  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189687, rend_intergenic: 181950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 213503, rend_intergenic: 190785  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223563, rend_intergenic: 213593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 226302, rend_intergenic: 224235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233649, rend_intergenic: 226305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 242314, rend_intergenic: 233906  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254253, rend_intergenic: 242711  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 271130, rend_intergenic: 254276  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 276931, rend_intergenic: 271158  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 284392, rend_intergenic: 277060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 288385, rend_intergenic: 284442  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 289115, rend_intergenic: 288722  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 292892, rend_intergenic: 289140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 304015, rend_intergenic: 296953  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 310354
-exon list size: 560


building trellis

0.2    
0.4    
0.5    
0.7    
0.9    
1.1    
1.2    
1.4    
1.6    
1.8    
2.0    
2.1    
2.3    
2.5    
2.7    
2.8    
3.0    
3.2    
3.4    
3.6    
3.7    
3.9    
4.1    
4.3    
4.4    
4.6    
4.8    
5.0    
5.2    
5.3    
5.5    
5.7    
5.9    
6.0    
6.2    
6.4    
6.6    
6.8    
6.9    
7.1    
7.3    
7.5    
7.7    
7.8    
8.0    
8.2    
8.4    
8.5    
8.7    
8.9    
9.1    
9.3    
9.4    
9.6    
9.8    
10.0    
10.1    
10.3    
10.5    
10.7    
10.9    
11.0    
11.2    
11.4    
11.6    
11.7    
11.9    
12.1    
12.3    
12.5    
12.6    
12.8    
13.0    
13.2    
13.3    
13.5    
13.7    
13.9    
14.1    
14.2    
14.4    
14.6    
14.8    
14.9    
15.1    
15.3    
15.5    
15.7    
15.8    
16.0    
16.2    
16.4    
16.5    
16.7    
16.9    
17.1    
17.3    
17.4    
17.6    
17.8    
18.0    
18.1    
18.3    
18.5    
18.7    
18.9    
19.0    
19.2    
19.4    
19.6    
19.8    
19.9    
20.1    
20.3    
20.5    
20.6    
20.8    
21.0    
21.2    
21.4    
21.5    
21.7    
21.9    
22.1    
22.2    
22.4    
22.6    
22.8    
23.0    
23.1    
23.3    
23.5    
23.7    
23.8    
24.0    
24.2    
24.4    
24.6    
24.7    
24.9    
25.1    
25.3    
25.4    
25.6    
25.8    
26.0    
26.2    
26.3    
26.5    
26.7    
26.9    
27.0    
27.2    
27.4    
27.6    
27.8    
27.9    
28.1    
28.3    
28.5    
28.6    
28.8    
29.0    
29.2    
29.4    
29.5    
29.7    
29.9    
30.1    
30.2    
30.4    
30.6    
30.8    
31.0    
31.1    
31.3    
31.5    
31.7    
31.9    
32.0    
32.2    
32.4    
32.6    
32.7    
32.9    
33.1    
33.3    
33.5    
33.6    
33.8    
34.0    
34.2    
34.3    
34.5    
34.7    
34.9    
35.1    
35.2    
35.4    
35.6    
35.8    
35.9    
36.1    
36.3    
36.5    
36.7    
36.8    
37.0    
37.2    
37.4    
37.5    
37.7    
37.9    
38.1    
38.3    
38.4    
38.6    
38.8    
39.0    
39.1    
39.3    
39.5    
39.7    
39.9    
40.0    
40.2    
40.4    
40.6    
40.7    
40.9    
41.1    
41.3    
41.5    
41.6    
41.8    
42.0    
42.2    
42.3    
42.5    
42.7    
42.9    
43.1    
43.2    
43.4    
43.6    
43.8    
44.0    
44.1    
44.3    
44.5    
44.7    
44.8    
45.0    
45.2    
45.4    
45.6    
45.7    
45.9    
46.1    
46.3    
46.4    
46.6    
46.8    
47.0    
47.2    
47.3    
47.5    
47.7    
47.9    
48.0    
48.2    
48.4    
48.6    
48.8    
48.9    
49.1    
49.3    
49.5    
49.6    
49.8    
50.0    
50.2    
50.4    
50.5    
50.7    
50.9    
51.1    
51.2    
51.4    
51.6    
51.8    
52.0    
52.1    
52.3    
52.5    
52.7    
52.8    
53.0    
53.2    
53.4    
53.6    
53.7    
53.9    
54.1    
54.3    
54.4    
54.6    
54.8    
55.0    
55.2    
55.3    
55.5    
55.7    
55.9    
56.0    
56.2    
56.4    
56.6    
56.8    
56.9    
57.1    
57.3    
57.5    
57.7    
57.8    
58.0    
58.2    
58.4    
58.5    
58.7    
58.9    
59.1    
59.3    
59.4    
59.6    
59.8    
60.0    
60.1    
60.3    
60.5    
60.7    
60.9    
61.0    
61.2    
61.4    
61.6    
61.7    
61.9    
62.1    
62.3    
62.5    
62.6    
62.8    
63.0    
63.2    
63.3    
63.5    
63.7    
63.9    
64.1    
64.2    
64.4    
64.6    
64.8    
64.9    
65.1    
65.3    
65.5    
65.7    
65.8    
66.0    
66.2    
66.4    
66.5    
66.7    
66.9    
67.1    
67.3    
67.4    
67.6    
67.8    
68.0    
68.1    
68.3    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.6    
69.8    
69.9    
70.1    
70.3    
70.5    
70.6    
70.8    
71.0    
71.2    
71.4    
71.5    
71.7    
71.9    
72.1    
72.2    
72.4    
72.6    
72.8    
73.0    
73.1    
73.3    
73.5    
73.7    
73.8    
74.0    
74.2    
74.4    
74.6    
74.7    
74.9    
75.1    
75.3    
75.4    
75.6    
75.8    
76.0    
76.2    
76.3    
76.5    
76.7    
76.9    
77.0    
77.2    
77.4    
77.6    
77.8    
77.9    
78.1    
78.3    
78.5    
78.6    
78.8    
79.0    
79.2    
79.4    
79.5    
79.7    
79.9    
80.1    
80.2    
80.4    
80.6    
80.8    
81.0    
81.1    
81.3    
81.5    
81.7    
81.9    
82.0    
82.2    
82.4    
82.6    
82.7    
82.9    
83.1    
83.3    
83.5    
83.6    
83.8    
84.0    
84.2    
84.3    
84.5    
84.7    
84.9    
85.1    
85.2    
85.4    
85.6    
85.8    
85.9    
86.1    
86.3    
86.5    
86.7    
86.8    
87.0    
87.2    
87.4    
87.5    
87.7    
87.9    
88.1    
88.3    
88.4    
88.6    
88.8    
89.0    
89.1    
89.3    
89.5    
89.7    
89.9    
90.0    
90.2    
90.4    
90.6    
90.7    
90.9    
91.1    
91.3    
91.5    
91.6    
91.8    
92.0    
92.2    
92.3    
92.5    
92.7    
92.9    
93.1    
93.2    
93.4    
93.6    
93.8    
94.0    
94.1    
94.3    
94.5    
94.7    
94.8    
95.0    
95.2    
95.4    
95.6    
95.7    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
97.0    
97.2    
97.3    
97.5    
97.7    
97.9    
98.0    
98.2    
98.4    
98.6    
98.8    
98.9    
99.1    
99.3    
99.5    
99.6    
99.8    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 49099, rend_intergenic: 10594  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62796, rend_intergenic: 49854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71509, rend_intergenic: 70551  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80945, rend_intergenic: 71700  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82663, rend_intergenic: 81388  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90503, rend_intergenic: 82993  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100926, rend_intergenic: 95128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103837, rend_intergenic: 100968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115374, rend_intergenic: 107474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121114, rend_intergenic: 115380  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137903, rend_intergenic: 130117  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150604, rend_intergenic: 138076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181449, rend_intergenic: 151009  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189687, rend_intergenic: 181950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 213503, rend_intergenic: 190785  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223563, rend_intergenic: 213593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 226302, rend_intergenic: 224235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233649, rend_intergenic: 226305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 242314, rend_intergenic: 233906  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254253, rend_intergenic: 242711  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 271130, rend_intergenic: 254276  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 276931, rend_intergenic: 271158  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 284392, rend_intergenic: 277060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 288385, rend_intergenic: 284442  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 289115, rend_intergenic: 288722  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 292892, rend_intergenic: 289140  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 304015, rend_intergenic: 296953  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 16 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 10308
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 2 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support