-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_19/scaffold_19_3494057-3675060

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g29110.t1
Valid prediction for GlimmerHMM_glimmerT_43869-T1
Valid prediction for snap_scaffold_19-snap.748-T1
Couldn't classify 33438, 33605
Sorry, prediction pasa_asmbl_21325.p1 fails validation.
(ATC)	 AG	33438-33605	GT	AGG
(AAC)	 AG	34051-34263	GT	CGG
(CCG)	 AG	34475-34593	GT	AGG
(GAC)	 AG	34745-34827	GT	AGG
(CTC)	 AG	35007-35090	GT	TGG
(GGA)	 AG	35443-35616	GT	CGG
(ACT)	 AG	36060-36223	GG	AGG
-recovered pasa_asmbl_21325.p1, terminal, 36060, 36223
-recovered pasa_asmbl_21325.p1, internal, 33438, 33605
-recovered pasa_asmbl_21325.p1, internal, 34051, 34263
-recovered pasa_asmbl_21325.p1, internal, 34475, 34593
-recovered pasa_asmbl_21325.p1, internal, 34745, 34827
-recovered pasa_asmbl_21325.p1, internal, 35007, 35090
-recovered pasa_asmbl_21325.p1, internal, 35443, 35616
Couldn't classify 19388, 19648
Sorry, prediction pasa_asmbl_21323.p1 fails validation.
(TCA)	 TG	19388-19648	GT	AGG
(GCG)	 AG	19770-19919	GT	TGG
(GGT)	 AG	20214-20354	GT	AGG
(GAG)	 AG	20471-20558	GT	AGG
(TGT)	 AG	20810-20949	GT	TGG
(GAC)	 AG	21863-22044	GT	AGG
(GCG)	 AG	22389-23266	GT	AGG
(GAG)	 AG	23588-23712	GT	AGG
(GTG)	 AG	23860-24138	GT	AGG
(GTG)	 AG	24533-24726	GT	GAG
(GTC)	 AG	25575-25624	GT	AGG
(AGT)	 AG	26325-26491	GT	AGG
(CCC)	 AG	26837-26882	GT	AGG
(AGA)	 AG	27324-27445	GT	AGG
(GCT)	 AG	27580-27676	GT	AGG
(TGT)	 AG	27823-28017	GT	ATG
(GGT)	 AG	28732-28739	TC	AGT
-recovered pasa_asmbl_21323.p1, terminal, 28732, 28739
-recovered pasa_asmbl_21323.p1, internal, 19770, 19919
-recovered pasa_asmbl_21323.p1, internal, 20214, 20354
-recovered pasa_asmbl_21323.p1, internal, 20471, 20558
-recovered pasa_asmbl_21323.p1, internal, 20810, 20949
-recovered pasa_asmbl_21323.p1, internal, 21863, 22044
-recovered pasa_asmbl_21323.p1, internal, 22389, 23266
-recovered pasa_asmbl_21323.p1, internal, 23588, 23712
-recovered pasa_asmbl_21323.p1, internal, 23860, 24138
-recovered pasa_asmbl_21323.p1, internal, 24533, 24726
-recovered pasa_asmbl_21323.p1, internal, 25575, 25624
-recovered pasa_asmbl_21323.p1, internal, 26325, 26491
-recovered pasa_asmbl_21323.p1, internal, 26837, 26882
-recovered pasa_asmbl_21323.p1, internal, 27324, 27445
-recovered pasa_asmbl_21323.p1, internal, 27580, 27676
-recovered pasa_asmbl_21323.p1, internal, 27823, 28017
Valid prediction for Augustus_model.g29107.t1
Valid prediction for CodingQuarry_transcript_25630-T1
Valid prediction for snap_scaffold_19-snap.751-T1
Valid prediction for snap_scaffold_19-snap.734-T1
Valid prediction for snap_scaffold_19-snap.728-T1
Couldn't classify 32001, 32117
Couldn't classify 32959, 33018
Sorry, prediction pasa_asmbl_21324.p1 fails validation.
(GCT)	 GT	32001-32117	GT	AGG
(GTG)	 AG	32412-32518	GT	AAG
(GGC)	 AG	32634-32817	GT	AGG
(AAA)	 AG	32959-33018	AT	CCA
-recovered pasa_asmbl_21324.p1, internal, 32412, 32518
-recovered pasa_asmbl_21324.p1, internal, 32634, 32817
Valid prediction for snap_scaffold_19-snap.733-T1
Valid prediction for snap_scaffold_19-snap.757-T1
Valid prediction for GlimmerHMM_glimmerT_43876-T1
Valid prediction for snap_scaffold_19-snap.730-T1
Valid prediction for GlimmerHMM_glimmerT_43864-T1
Valid prediction for snap_scaffold_19-snap.752-T1
Valid prediction for snap_scaffold_19-snap.747-T1
Valid prediction for Augustus_model.g29109.t1
Valid prediction for GlimmerHMM_glimmerT_43866-T1
Valid prediction for HiQ_model.g29106.t1
Valid prediction for GlimmerHMM_glimmerT_43886-T1
Valid prediction for snap_scaffold_19-snap.763-T1
Valid prediction for snap_scaffold_19-snap.755-T1
Valid prediction for GlimmerHMM_glimmerT_43873-T1
Valid prediction for GlimmerHMM_glimmerT_43881-T1
Couldn't classify 18987, 19125
Sorry, prediction pasa_asmbl_21320.p1 fails validation.
(ATG)	 CC	14798-14804	GT	TGG
(GGG)	 AG	15292-15384	GT	AGG
(GGG)	 AG	15768-15831	GT	TGG
(GGC)	 AG	16003-16187	GT	CGG
(GGA)	 AG	16346-16597	GT	TGG
(GTT)	 AG	17082-17178	GT	AGG
(CTC)	 AG	17390-17532	GT	AGG
(GTC)	 AG	18822-18885	GT	TGG
(GAC)	 AG	18987-19125	TG	GGT
-recovered pasa_asmbl_21320.p1, initial, 14798, 14804
-recovered pasa_asmbl_21320.p1, internal, 15292, 15384
-recovered pasa_asmbl_21320.p1, internal, 15768, 15831
-recovered pasa_asmbl_21320.p1, internal, 16003, 16187
-recovered pasa_asmbl_21320.p1, internal, 16346, 16597
-recovered pasa_asmbl_21320.p1, internal, 17082, 17178
-recovered pasa_asmbl_21320.p1, internal, 17390, 17532
-recovered pasa_asmbl_21320.p1, internal, 18822, 18885
Valid prediction for GlimmerHMM_glimmerT_43865-T1
Valid prediction for GlimmerHMM_glimmerT_43874-T1
Valid prediction for HiQ_model.g29113.t1
Valid prediction for GlimmerHMM_glimmerT_43870-T1
Valid prediction for snap_scaffold_19-snap.760-T1
Valid prediction for snap_scaffold_19-snap.762-T1
Valid prediction for CodingQuarry_transcript_25629-T1
Valid prediction for snap_scaffold_19-snap.756-T1
Valid prediction for GlimmerHMM_glimmerT_43877-T1
Valid prediction for snap_scaffold_19-snap.745-T1
Valid prediction for GlimmerHMM_glimmerT_43878-T1
Valid prediction for snap_scaffold_19-snap.737-T1
Valid prediction for HiQ_model.g29112.t1
Valid prediction for snap_scaffold_19-snap.743-T1
Valid prediction for GlimmerHMM_glimmerT_43888-T1
Valid prediction for snap_scaffold_19-snap.750-T1
Valid prediction for snap_scaffold_19-snap.739-T1
Valid prediction for pasa_asmbl_21326.p1
Valid prediction for Augustus_model.g29118.t1
Valid prediction for GlimmerHMM_glimmerT_43867-T1
Valid prediction for snap_scaffold_19-snap.742-T1
Valid prediction for CodingQuarry_transcript_25628-T1
Valid prediction for GlimmerHMM_glimmerT_43887-T1
Valid prediction for GlimmerHMM_glimmerT_43892-T1
Valid prediction for Augustus_model.g29119.t1
Valid prediction for GlimmerHMM_glimmerT_43885-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 174942, 175082
Couldn't classify 176664, 176674
Sorry, prediction pasa_asmbl_22110.p1 fails validation.
(CTG)	 AG	174942-175082	GT	AGG
(GTT)	 AG	175197-175320	GT	CTG
(ACA)	 AG	175482-175545	GT	GGG
(TGA)	 AG	175668-175744	GT	AGG
(CTG)	 AG	175921-176120	GT	AGG
(TCA)	 AG	176316-176460	GT	GGG
(GCT)	 AG	176664-176674	CT	AGC
-recovered pasa_asmbl_22110.p1, internal, 174942, 175082
-recovered pasa_asmbl_22110.p1, internal, 175197, 175320
-recovered pasa_asmbl_22110.p1, internal, 175482, 175545
-recovered pasa_asmbl_22110.p1, internal, 175668, 175744
-recovered pasa_asmbl_22110.p1, internal, 175921, 176120
-recovered pasa_asmbl_22110.p1, internal, 176316, 176460
Valid prediction for Augustus_model.g29105.t1
Valid prediction for snap_scaffold_19-snap.744-T1
Valid prediction for Augustus_model.g29108.t1
Valid prediction for snap_scaffold_19-snap.727-T1
Valid prediction for snap_scaffold_19-snap.758-T1
Valid prediction for snap_scaffold_19-snap.729-T1
Valid prediction for GlimmerHMM_glimmerT_43863-T1
Valid prediction for snap_scaffold_19-snap.749-T1
Sorry, intron length (4) is less than minimum required (10)
Couldn't classify 58628, 58723
Sorry, prediction pasa_asmbl_22115.p1 fails validation.
(CAG)	 CT	58628-58723	GT	ATG
(GTC)	 AG	60018-60099	GT	AGG
(GGG)	 AG	60467-60579	GT	TGG
(ATC)	 AG	60715-60933	GT	GAG
-recovered pasa_asmbl_22115.p1, terminal, 60715, 60933
-recovered pasa_asmbl_22115.p1, internal, 60018, 60099
-recovered pasa_asmbl_22115.p1, internal, 60467, 60579
-recovered pasa_asmbl_22115.p1, internal, 60715, 60933
Valid prediction for HiQ_model.g29122.t1
Valid prediction for GlimmerHMM_glimmerT_43883-T1
Valid prediction for GlimmerHMM_glimmerT_43871-T1
Valid prediction for HiQ_model.g29121.t1
Valid prediction for GlimmerHMM_glimmerT_43862-T1
Valid prediction for Augustus_model.g29120.t1
Valid prediction for GlimmerHMM_glimmerT_43889-T1
Valid prediction for Augustus_model.g29114.t1
Couldn't classify 176451, 176460
Sorry, prediction pasa_asmbl_22109.p1 fails validation.
(AAA)	 CC	176451-176460	GT	GGG
(GCT)	 AG	176664-176785	GT	AGG
(TCA)	 AG	176870-176946	GT	AAG
(GTT)	 AG	177081-177147	GT	AGG
(CTC)	 AG	177591-177737	GT	AGG
(GTG)	 AG	177893-178032	GT	AGG
(GGA)	 AG	178134-178251	TC	GAT
-recovered pasa_asmbl_22109.p1, terminal, 178134, 178251
-recovered pasa_asmbl_22109.p1, internal, 176664, 176785
-recovered pasa_asmbl_22109.p1, internal, 176870, 176946
-recovered pasa_asmbl_22109.p1, internal, 177081, 177147
-recovered pasa_asmbl_22109.p1, internal, 177591, 177737
-recovered pasa_asmbl_22109.p1, internal, 177893, 178032
Valid prediction for snap_scaffold_19-snap.746-T1
Valid prediction for snap_scaffold_19-snap.740-T1
Valid prediction for snap_scaffold_19-snap.759-T1
Valid prediction for GlimmerHMM_glimmerT_43890-T1
Valid prediction for snap_scaffold_19-snap.761-T1
Valid prediction for snap_scaffold_19-snap.732-T1
Couldn't classify 6800, 7234
Sorry, prediction pasa_asmbl_22116.p3 fails validation.
(ATG)	 AT	6800-7234	CT	ACC
Valid prediction for Augustus_model.g29117.t1
Valid prediction for snap_scaffold_19-snap.736-T1
Valid prediction for HiQ_model.g29111.t1
Valid prediction for CodingQuarry_transcript_25631-T1
Valid prediction for snap_scaffold_19-snap.764-T1
Valid prediction for GlimmerHMM_glimmerT_43882-T1
Valid prediction for GlimmerHMM_glimmerT_43884-T1
Valid prediction for Augustus_model.g29116.t1
Valid prediction for snap_scaffold_19-snap.735-T1
Valid prediction for GlimmerHMM_glimmerT_43872-T1
Valid prediction for snap_scaffold_19-snap.731-T1
Valid prediction for GlimmerHMM_glimmerT_43880-T1
Valid prediction for CodingQuarry_transcript_25626-T1
Valid prediction for snap_scaffold_19-snap.741-T1
Valid prediction for GlimmerHMM_glimmerT_43875-T1
Valid prediction for pasa_asmbl_22113.p1
Valid prediction for GlimmerHMM_glimmerT_43868-T1
Valid prediction for CodingQuarry_transcript_25627-T1
Valid prediction for GlimmerHMM_glimmerT_43891-T1
Couldn't classify 171639, 171972
Couldn't classify 173433, 173536
Sorry, prediction pasa_asmbl_22701.p1 fails validation.
(CCC)	 AG	171639-171972	GT	AGG
(TTG)	 AG	172227-172331	GT	AGG
(CAG)	 AG	172428-172613	GT	GGG
(TGG)	 AG	172712-172957	GT	GGG
(GAG)	 AG	173433-173536	GT	AGG
-recovered pasa_asmbl_22701.p1, internal, 171639, 171972
-recovered pasa_asmbl_22701.p1, internal, 172227, 172331
-recovered pasa_asmbl_22701.p1, internal, 172428, 172613
-recovered pasa_asmbl_22701.p1, internal, 172712, 172957
-recovered pasa_asmbl_22701.p1, internal, 173433, 173536
Valid prediction for snap_scaffold_19-snap.754-T1
Valid prediction for snap_scaffold_19-snap.738-T1
Valid prediction for Augustus_model.g29115.t1
Valid prediction for snap_scaffold_19-snap.753-T1
Valid prediction for GlimmerHMM_glimmerT_43879-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9348, rend_intergenic: 3088  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20840, rend_intergenic: 10840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29623, rend_intergenic: 20877  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35280, rend_intergenic: 30745  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44966, rend_intergenic: 38309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51434, rend_intergenic: 48772  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61766, rend_intergenic: 58429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65992, rend_intergenic: 62907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71354, rend_intergenic: 68820  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75529, rend_intergenic: 74661  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95824, rend_intergenic: 75858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96683, rend_intergenic: 95926  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112154, rend_intergenic: 96938  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145094, rend_intergenic: 121126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153657, rend_intergenic: 145131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165092, rend_intergenic: 157281  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172260, rend_intergenic: 166790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 181004
-exon list size: 536


building trellis

0.2    
0.4    
0.6    
0.7    
0.9    
1.1    
1.3    
1.5    
1.7    
1.9    
2.0    
2.2    
2.4    
2.6    
2.8    
3.0    
3.2    
3.3    
3.5    
3.7    
3.9    
4.1    
4.3    
4.5    
4.6    
4.8    
5.0    
5.2    
5.4    
5.6    
5.8    
5.9    
6.1    
6.3    
6.5    
6.7    
6.9    
7.1    
7.2    
7.4    
7.6    
7.8    
8.0    
8.2    
8.4    
8.6    
8.7    
8.9    
9.1    
9.3    
9.5    
9.7    
9.9    
10.0    
10.2    
10.4    
10.6    
10.8    
11.0    
11.2    
11.3    
11.5    
11.7    
11.9    
12.1    
12.3    
12.5    
12.6    
12.8    
13.0    
13.2    
13.4    
13.6    
13.8    
13.9    
14.1    
14.3    
14.5    
14.7    
14.9    
15.1    
15.2    
15.4    
15.6    
15.8    
16.0    
16.2    
16.4    
16.5    
16.7    
16.9    
17.1    
17.3    
17.5    
17.7    
17.8    
18.0    
18.2    
18.4    
18.6    
18.8    
19.0    
19.1    
19.3    
19.5    
19.7    
19.9    
20.1    
20.3    
20.4    
20.6    
20.8    
21.0    
21.2    
21.4    
21.6    
21.7    
21.9    
22.1    
22.3    
22.5    
22.7    
22.9    
23.0    
23.2    
23.4    
23.6    
23.8    
24.0    
24.2    
24.3    
24.5    
24.7    
24.9    
25.1    
25.3    
25.5    
25.7    
25.8    
26.0    
26.2    
26.4    
26.6    
26.8    
27.0    
27.1    
27.3    
27.5    
27.7    
27.9    
28.1    
28.3    
28.4    
28.6    
28.8    
29.0    
29.2    
29.4    
29.6    
29.7    
29.9    
30.1    
30.3    
30.5    
30.7    
30.9    
31.0    
31.2    
31.4    
31.6    
31.8    
32.0    
32.2    
32.3    
32.5    
32.7    
32.9    
33.1    
33.3    
33.5    
33.6    
33.8    
34.0    
34.2    
34.4    
34.6    
34.8    
34.9    
35.1    
35.3    
35.5    
35.7    
35.9    
36.1    
36.2    
36.4    
36.6    
36.8    
37.0    
37.2    
37.4    
37.5    
37.7    
37.9    
38.1    
38.3    
38.5    
38.7    
38.8    
39.0    
39.2    
39.4    
39.6    
39.8    
40.0    
40.1    
40.3    
40.5    
40.7    
40.9    
41.1    
41.3    
41.4    
41.6    
41.8    
42.0    
42.2    
42.4    
42.6    
42.8    
42.9    
43.1    
43.3    
43.5    
43.7    
43.9    
44.1    
44.2    
44.4    
44.6    
44.8    
45.0    
45.2    
45.4    
45.5    
45.7    
45.9    
46.1    
46.3    
46.5    
46.7    
46.8    
47.0    
47.2    
47.4    
47.6    
47.8    
48.0    
48.1    
48.3    
48.5    
48.7    
48.9    
49.1    
49.3    
49.4    
49.6    
49.8    
50.0    
50.2    
50.4    
50.6    
50.7    
50.9    
51.1    
51.3    
51.5    
51.7    
51.9    
52.0    
52.2    
52.4    
52.6    
52.8    
53.0    
53.2    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.6    
54.8    
55.0    
55.2    
55.4    
55.6    
55.8    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.2    
57.4    
57.6    
57.8    
58.0    
58.2    
58.4    
58.6    
58.7    
58.9    
59.1    
59.3    
59.5    
59.7    
59.9    
60.0    
60.2    
60.4    
60.6    
60.8    
61.0    
61.2    
61.3    
61.5    
61.7    
61.9    
62.1    
62.3    
62.5    
62.6    
62.8    
63.0    
63.2    
63.4    
63.6    
63.8    
63.9    
64.1    
64.3    
64.5    
64.7    
64.9    
65.1    
65.2    
65.4    
65.6    
65.8    
66.0    
66.2    
66.4    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.7    
67.8    
68.0    
68.2    
68.4    
68.6    
68.8    
69.0    
69.1    
69.3    
69.5    
69.7    
69.9    
70.1    
70.3    
70.4    
70.6    
70.8    
71.0    
71.2    
71.4    
71.6    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.0    
73.2    
73.4    
73.6    
73.8    
74.0    
74.2    
74.3    
74.5    
74.7    
74.9    
75.1    
75.3    
75.5    
75.7    
75.8    
76.0    
76.2    
76.4    
76.6    
76.8    
77.0    
77.1    
77.3    
77.5    
77.7    
77.9    
78.1    
78.3    
78.4    
78.6    
78.8    
79.0    
79.2    
79.4    
79.6    
79.7    
79.9    
80.1    
80.3    
80.5    
80.7    
80.9    
81.0    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.3    
82.5    
82.7    
82.9    
83.1    
83.3    
83.5    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
84.9    
85.1    
85.3    
85.5    
85.7    
85.9    
86.1    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.5    
87.7    
87.9    
88.1    
88.3    
88.5    
88.7    
88.8    
89.0    
89.2    
89.4    
89.6    
89.8    
90.0    
90.1    
90.3    
90.5    
90.7    
90.9    
91.1    
91.3    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
92.9    
93.1    
93.3    
93.5    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.8    
95.0    
95.2    
95.4    
95.5    
95.7    
95.9    
96.1    
96.3    
96.5    
96.7    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.7    
98.9    
99.1    
99.3    
99.4    
99.6    
99.8    
-found 21 predictions from path traversal
Error with prediction: snap lend_intergenic: 9348, rend_intergenic: 3088  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20840, rend_intergenic: 10840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29623, rend_intergenic: 20877  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35280, rend_intergenic: 30745  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44966, rend_intergenic: 38309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51434, rend_intergenic: 48772  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61766, rend_intergenic: 58429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65992, rend_intergenic: 62907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71354, rend_intergenic: 68820  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75529, rend_intergenic: 74661  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95824, rend_intergenic: 75858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96683, rend_intergenic: 95926  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112154, rend_intergenic: 96938  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145094, rend_intergenic: 121126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153657, rend_intergenic: 145131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165092, rend_intergenic: 157281  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172260, rend_intergenic: 166790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support